##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062696_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 645146 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.167982131176508 32.0 32.0 32.0 32.0 32.0 2 31.218807835745707 32.0 32.0 32.0 32.0 32.0 3 31.387867242453645 32.0 32.0 32.0 32.0 32.0 4 31.529900208634945 32.0 32.0 32.0 32.0 32.0 5 31.42833095144355 32.0 32.0 32.0 32.0 32.0 6 35.02160286198783 36.0 36.0 36.0 36.0 36.0 7 35.038299857706626 36.0 36.0 36.0 36.0 36.0 8 34.96001215228801 36.0 36.0 36.0 36.0 36.0 9 35.132084830410484 36.0 36.0 36.0 36.0 36.0 10 34.96860865602515 36.0 36.0 36.0 36.0 36.0 11 35.13410452827732 36.0 36.0 36.0 36.0 36.0 12 35.02402556940599 36.0 36.0 36.0 36.0 36.0 13 35.08893335772058 36.0 36.0 36.0 36.0 36.0 14 35.04971277819284 36.0 36.0 36.0 36.0 36.0 15 34.99921568141165 36.0 36.0 36.0 36.0 36.0 16 35.01122381600444 36.0 36.0 36.0 36.0 36.0 17 34.964950569328494 36.0 36.0 36.0 32.0 36.0 18 34.99371615107278 36.0 36.0 36.0 36.0 36.0 19 34.97685485145998 36.0 36.0 36.0 36.0 36.0 20 34.971600226925375 36.0 36.0 36.0 32.0 36.0 21 34.959322385940546 36.0 36.0 36.0 32.0 36.0 22 34.932393597728264 36.0 36.0 36.0 32.0 36.0 23 34.87611331388554 36.0 36.0 36.0 32.0 36.0 24 34.855364522139176 36.0 36.0 36.0 32.0 36.0 25 34.83047868234477 36.0 36.0 36.0 32.0 36.0 26 34.78179357850781 36.0 36.0 36.0 32.0 36.0 27 34.76373410049818 36.0 36.0 36.0 32.0 36.0 28 34.73919391889588 36.0 36.0 36.0 32.0 36.0 29 34.70193258580228 36.0 36.0 36.0 32.0 36.0 30 34.69744987956214 36.0 36.0 36.0 32.0 36.0 31 34.68946099022547 36.0 36.0 36.0 32.0 36.0 32 34.65097202803707 36.0 36.0 36.0 32.0 36.0 33 34.62514221587052 36.0 36.0 36.0 32.0 36.0 34 34.60644567276245 36.0 36.0 36.0 32.0 36.0 35 34.5738142993989 36.0 36.0 36.0 32.0 36.0 36 34.53446506682209 36.0 36.0 36.0 32.0 36.0 37 34.53522458482266 36.0 36.0 36.0 32.0 36.0 38 34.48612717121396 36.0 36.0 36.0 32.0 36.0 39 34.43787762769978 36.0 36.0 36.0 32.0 36.0 40 34.422710518239285 36.0 36.0 36.0 32.0 36.0 41 34.39867874868634 36.0 36.0 36.0 32.0 36.0 42 34.34721132890849 36.0 36.0 36.0 32.0 36.0 43 34.345582240299095 36.0 36.0 36.0 32.0 36.0 44 34.31548672703543 36.0 36.0 36.0 32.0 36.0 45 34.24664184541174 36.0 36.0 36.0 32.0 36.0 46 34.279750630089936 36.0 36.0 36.0 32.0 36.0 47 34.24481590213688 36.0 36.0 36.0 32.0 36.0 48 34.21093519916422 36.0 36.0 36.0 32.0 36.0 49 34.21898764000707 36.0 36.0 36.0 32.0 36.0 50 33.64554844949825 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 9.0 22 53.0 23 174.0 24 428.0 25 1025.0 26 2162.0 27 4123.0 28 7136.0 29 10934.0 30 16087.0 31 23973.0 32 36228.0 33 60107.0 34 128285.0 35 354420.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.40623415842582 17.285240574893148 10.966593753439607 26.341931513241423 2 16.539403521825395 19.941251240079367 35.89657738095238 27.622767857142854 3 19.44065114245989 23.141846071336122 28.041844986305364 29.375657799898626 4 12.479539451657304 14.929845119849212 35.37613308036656 37.21448234812693 5 14.646607124588854 36.45531399094158 33.25200807259132 15.646070811878241 6 36.13576545938724 34.51503699960629 15.929981306441062 13.419216234565415 7 31.194179302049456 29.92531923006575 19.88557628815803 18.99492517972676 8 28.9805718395526 32.81195264327765 18.864257082892866 19.343218434276892 9 27.253985919466288 13.8204375443698 17.878433718879137 41.04714281728477 10 15.763408592783648 26.76913442848596 31.57905342356614 25.888403555164256 11 38.932892709557215 20.57193255480155 20.85791433256968 19.63726040307155 12 24.135932021588914 23.549088113388287 28.591202611501892 23.723777253520907 13 30.120468855111866 18.470547751981723 25.14438592194635 26.264597470960062 14 23.34215820914956 19.121563181047392 24.54421169781724 32.99206691198581 15 25.696819014610643 26.478037529489452 22.112979077604138 25.712164378295764 16 26.580029946709736 25.508799558549537 23.23520567437448 24.675964820366243 17 24.378047759731906 25.706274238699457 24.85189398988756 25.06378401168108 18 25.720069565648707 24.329996620919918 25.855387772690214 24.094546040741164 19 25.74688520117927 25.558710741444575 24.360222337269395 24.334181720106766 20 25.42463256379176 24.232499310233653 25.038518412886386 25.304349713088197 21 26.60638057121954 24.555836973336266 23.687971404922298 25.149811050521897 22 25.499499338134314 24.466089846329357 24.714870742436595 25.319540073099734 23 24.656279353820683 24.099351154622365 24.834378574772224 26.409990916784725 24 24.752381631444663 25.444783041358082 24.430904012425096 25.371931314772162 25 25.557780719403052 24.336971786231334 24.358362293186346 25.74688520117927 26 24.60326809745391 25.209952475873678 25.123925437032856 25.062853989639557 27 25.753085348122752 24.698750360383542 24.448419427540433 25.099744863953276 28 24.844453813555383 24.44748940549891 25.25676358529697 25.451293195648738 29 24.513830977794175 24.826938398440042 25.36991626701553 25.289314356750253 30 24.82910844987026 24.905215253601508 25.59110650922427 24.67456978730396 31 25.016662894910606 24.863674269080178 24.437724174062925 25.68193866194629 32 24.82461334333624 24.86258924336507 24.533671448013315 25.779125965285377 33 24.465314827961425 24.32457149234437 25.014337839806807 26.195775839887403 34 25.0586688904527 24.911260396871405 25.419672446236973 24.610398266438914 35 26.00326127729227 24.45182950835935 24.99496238060842 24.54994683373996 36 24.505305775746887 25.281719176744488 24.79376761229241 25.41920743521621 37 25.941414811531033 24.81562313026819 24.667439618318955 24.575522439881826 38 24.849568934783754 24.592417840302815 24.9676817340571 25.590331490856332 39 25.259708655095125 24.56529219742508 24.63054874400523 25.54445040347456 40 25.626912357822878 24.845848846617667 24.70789557712518 24.819343218434277 41 24.23001925145626 25.01929795736159 25.71200937462218 25.03867341655997 42 26.13067429698084 25.183291844016704 24.761836855533474 23.924197003468983 43 25.055413813307375 23.880795974864604 25.026738133693772 26.037052078134256 44 24.694720264870277 24.725410992240516 25.223747802822928 25.35612094006628 45 24.9796170169233 24.95373140343426 24.92257566504326 25.144075914599174 46 24.649459192182853 24.621558530937182 25.241263217938265 25.4877190589417 47 24.956366465885242 24.487170345937198 25.59048649452992 24.96597669364764 48 25.551580572459564 25.56041578185403 24.204908656335157 24.683094989351247 49 24.350612109506994 25.233513034258912 25.337210491888655 25.07866436434544 50 24.537236532505823 25.466173548313094 24.319921382136755 25.67666853704433 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 6.5 2 9.0 3 29.0 4 49.0 5 60.0 6 71.0 7 74.0 8 77.0 9 88.0 10 99.0 11 157.0 12 215.0 13 368.0 14 521.0 15 702.0 16 883.0 17 1047.0 18 1211.0 19 1436.5 20 1662.0 21 2150.0 22 2638.0 23 2884.5 24 3131.0 25 3722.5 26 4314.0 27 5489.5 28 6665.0 29 7463.5 30 8262.0 31 8693.5 32 9125.0 33 10277.0 34 11429.0 35 13263.5 36 15098.0 37 18198.0 38 21298.0 39 23337.5 40 25377.0 41 28017.5 42 30658.0 43 32096.5 44 33535.0 45 37928.5 46 42322.0 47 46227.0 48 50132.0 49 51507.5 50 52883.0 51 50031.0 52 47179.0 53 46206.0 54 45233.0 55 46342.5 56 47452.0 57 46100.0 58 44748.0 59 41055.5 60 37363.0 61 33077.5 62 28792.0 63 25110.0 64 21428.0 65 18511.5 66 15595.0 67 13383.5 68 11172.0 69 10243.0 70 9314.0 71 7222.0 72 5130.0 73 4651.0 74 4172.0 75 2993.5 76 1815.0 77 1632.0 78 1449.0 79 1263.5 80 1078.0 81 878.0 82 678.0 83 540.5 84 403.0 85 342.5 86 282.0 87 210.0 88 138.0 89 87.5 90 37.0 91 24.0 92 11.0 93 6.0 94 1.0 95 3.0 96 5.0 97 3.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013485319602074568 2 0.004030095513263664 3 4.65011020761192E-4 4 3.1000734717412804E-4 5 0.0 6 6.200146943482561E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 645146.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.16166619385853 #Duplication Level Percentage of deduplicated Percentage of total 1 82.27962709468846 50.32359086920495 2 11.274076100639396 13.7908255822293 3 3.050855114462362 5.597861463497193 4 1.1228037859810265 2.746902014374885 5 0.5936707956396646 1.8154947515977788 6 0.34202945398973045 1.2551454776032553 7 0.22443044449616126 0.9608577951009457 8 0.1522533770365698 0.7449656178558695 9 0.11623192258267796 0.6398044245064941 >10 0.6794714995413499 7.995665619361117 >50 0.08545435688601216 3.71643570680464 >100 0.07528113183520632 8.844337690167329 >500 0.0035605940732766094 1.4111616927270065 >1k 2.543281480911864E-4 0.1569512949693066 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1009 0.15639870664934757 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 822 0.12741301968856664 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 807 0.12508796458476065 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 799 0.12384793519606414 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 720 0.11160264498268609 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 710 0.11005260824681545 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 663 0.10276743558822343 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.5500367358706402E-4 0.0 12 0.0 0.0 0.0 1.5500367358706402E-4 4.6501102076119207E-4 13 0.0 0.0 0.0 1.5500367358706402E-4 6.200146943482561E-4 14 0.0 0.0 0.0 1.5500367358706402E-4 6.200146943482561E-4 15 0.0 0.0 0.0 1.5500367358706402E-4 6.200146943482561E-4 16 0.0 0.0 0.0 1.5500367358706402E-4 6.200146943482561E-4 17 0.0 0.0 0.0 3.1000734717412804E-4 6.200146943482561E-4 18 0.0 0.0 0.0 4.6501102076119207E-4 6.200146943482561E-4 19 0.0 0.0 0.0 6.200146943482561E-4 6.200146943482561E-4 20 0.0 0.0 0.0 7.750183679353201E-4 6.200146943482561E-4 21 0.0 0.0 0.0 0.0012400293886965122 6.200146943482561E-4 22 0.0 0.0 0.0 0.0017050404094577042 6.200146943482561E-4 23 0.0 0.0 0.0 0.0035650844925024724 6.200146943482561E-4 24 0.0 0.0 0.0 0.005735135922721369 6.200146943482561E-4 25 0.0 0.0 0.0 0.008990213068049712 6.200146943482561E-4 26 0.0 0.0 0.0 0.011470271845442737 6.200146943482561E-4 27 0.0 0.0 0.0 0.01426033797000989 6.200146943482561E-4 28 0.0 0.0 0.0 0.021855517975776027 6.200146943482561E-4 29 0.0 0.0 0.0 0.0310007347174128 6.200146943482561E-4 30 0.0 0.0 0.0 0.04727612044405453 6.200146943482561E-4 31 0.0 0.0 0.0 0.07595180005766136 6.200146943482561E-4 32 0.0 0.0 0.0 0.1171827772318204 6.200146943482561E-4 33 0.0 0.0 0.0 0.15965378379467593 6.200146943482561E-4 34 0.0 0.0 0.0 0.21064999240482 6.200146943482561E-4 35 0.0 0.0 0.0 0.26753634061127246 6.200146943482561E-4 36 0.0 0.0 0.0 0.34271312230099854 6.200146943482561E-4 37 0.0 0.0 0.0 0.4605159142271672 6.200146943482561E-4 38 0.0 0.0 0.0 0.5983141800460671 6.200146943482561E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 160 0.0 24.749912 29 TCTAGCG 165 0.0 23.999914 28 CGCAATA 165 0.0 23.999914 36 TAGCGGC 170 0.0 23.294035 30 TACGAGC 85 2.3492066E-7 23.294035 14 ATACACT 190 0.0 23.157814 4 CGGTCCA 175 0.0 22.62849 10 GTACCGT 50 0.0025791982 21.999924 6 GCTATAC 50 0.0025791982 21.999924 3 TAGCACC 50 0.0025791982 21.999924 4 AATACGA 185 0.0 21.405329 39 ATACCGT 160 1.8189894E-12 20.624928 6 GATATAC 195 0.0 20.31077 1 CAATACG 195 0.0 20.307621 38 CGTCGTG 55 0.004481475 19.999931 29 ATACGAA 200 0.0 19.79993 40 CGAATGC 190 0.0 19.684143 43 CTAGACA 80 8.9805384E-5 19.249931 4 CTAGGAC 115 2.0178231E-7 19.130367 3 ACACGCT 265 0.0 19.094273 9 >>END_MODULE