##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062695_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1390570 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2958556563136 32.0 32.0 32.0 32.0 32.0 2 31.403026097211935 32.0 32.0 32.0 32.0 32.0 3 31.492939585925196 32.0 32.0 32.0 32.0 32.0 4 31.59700554448895 32.0 32.0 32.0 32.0 32.0 5 31.52235773819369 32.0 32.0 32.0 32.0 32.0 6 35.12630288299043 36.0 36.0 36.0 36.0 36.0 7 35.15396779737805 36.0 36.0 36.0 36.0 36.0 8 35.081265955687236 36.0 36.0 36.0 36.0 36.0 9 35.2197674334985 36.0 36.0 36.0 36.0 36.0 10 35.08991996087935 36.0 36.0 36.0 36.0 36.0 11 35.21867219917012 36.0 36.0 36.0 36.0 36.0 12 35.13191712750886 36.0 36.0 36.0 36.0 36.0 13 35.17253212711334 36.0 36.0 36.0 36.0 36.0 14 35.13633330217105 36.0 36.0 36.0 36.0 36.0 15 35.09611741947547 36.0 36.0 36.0 36.0 36.0 16 35.110660376680066 36.0 36.0 36.0 36.0 36.0 17 35.0802347238902 36.0 36.0 36.0 36.0 36.0 18 35.09214207123698 36.0 36.0 36.0 36.0 36.0 19 35.08625815313145 36.0 36.0 36.0 36.0 36.0 20 35.07141316150931 36.0 36.0 36.0 36.0 36.0 21 35.059972529250594 36.0 36.0 36.0 36.0 36.0 22 35.0445500765873 36.0 36.0 36.0 36.0 36.0 23 35.01050648295303 36.0 36.0 36.0 36.0 36.0 24 34.98799772755057 36.0 36.0 36.0 36.0 36.0 25 34.954307226533004 36.0 36.0 36.0 32.0 36.0 26 34.91492265761522 36.0 36.0 36.0 32.0 36.0 27 34.893691795450785 36.0 36.0 36.0 32.0 36.0 28 34.88766405143215 36.0 36.0 36.0 32.0 36.0 29 34.864880588535634 36.0 36.0 36.0 32.0 36.0 30 34.8386719115183 36.0 36.0 36.0 32.0 36.0 31 34.838495005645164 36.0 36.0 36.0 32.0 36.0 32 34.79828128033828 36.0 36.0 36.0 32.0 36.0 33 34.78612295677312 36.0 36.0 36.0 32.0 36.0 34 34.7752547516486 36.0 36.0 36.0 32.0 36.0 35 34.749226576152225 36.0 36.0 36.0 32.0 36.0 36 34.723359485678536 36.0 36.0 36.0 32.0 36.0 37 34.70334179509122 36.0 36.0 36.0 32.0 36.0 38 34.668575476243554 36.0 36.0 36.0 32.0 36.0 39 34.6465931236831 36.0 36.0 36.0 32.0 36.0 40 34.632002703927164 36.0 36.0 36.0 32.0 36.0 41 34.605545927209704 36.0 36.0 36.0 32.0 36.0 42 34.56454835067634 36.0 36.0 36.0 32.0 36.0 43 34.56303386381124 36.0 36.0 36.0 32.0 36.0 44 34.540087877632914 36.0 36.0 36.0 32.0 36.0 45 34.49380469879258 36.0 36.0 36.0 32.0 36.0 46 34.50595655019165 36.0 36.0 36.0 32.0 36.0 47 34.47494624506497 36.0 36.0 36.0 32.0 36.0 48 34.44278461350382 36.0 36.0 36.0 32.0 36.0 49 34.431176424056325 36.0 36.0 36.0 32.0 36.0 50 33.914883824618684 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 26.0 22 87.0 23 280.0 24 809.0 25 1882.0 26 3962.0 27 7574.0 28 13091.0 29 20609.0 30 30588.0 31 44886.0 32 67290.0 33 111081.0 34 248031.0 35 840364.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.72793678170427 17.83254228949831 11.026088982901513 26.41343194589591 2 17.033487042145747 20.347599582310924 35.6469721857048 26.97194118983853 3 18.984828447182903 23.963747057846355 28.21439949142901 28.837025003541733 4 12.70387352506314 15.384720488318443 36.044767318103105 35.86663866851531 5 14.666863228747923 36.322659053481665 33.25219154735108 15.758286170419325 6 34.247328955723624 35.57708004179608 16.42250861343012 13.753082389050174 7 30.507130169642664 30.02941239923197 20.59241893611972 18.871038495005646 8 28.717884549418258 32.080680642240694 19.364375302484092 19.837059505856956 9 27.840238175712116 13.503167765736352 18.223462321206412 40.43313173734512 10 16.38054898351036 26.224569780737394 31.023752849550906 26.37112838620134 11 38.49378312490561 20.892583616790237 21.493416368827173 19.120216889476975 12 24.563955787914306 23.497630468081436 28.552823662239224 23.38559008176503 13 29.673155612446696 19.310498572527813 25.109487476358616 25.906858338666876 14 23.657564883465053 19.631374184686855 24.490173094486433 32.22088783736166 15 26.104259404416897 26.530487497932505 21.85233393500507 25.512919162645538 16 26.458718367288235 25.55829623823324 23.30792408868306 24.675061305795467 17 24.391220866263474 25.364418907354537 24.74805295670121 25.49630726968078 18 25.46106992096766 24.578266466269227 25.769288852772604 24.19137475999051 19 26.282028233026743 24.71396621529301 24.48039293239463 24.52361261928562 20 25.901249128055404 24.004616811810983 24.760206246359406 25.33392781377421 21 27.156561697721077 23.68194337573801 23.963842165442948 25.197652761097967 22 25.939938298683273 24.361808467031505 24.50369273031922 25.194560503966002 23 24.880300883810236 23.913934573592126 25.027938183622545 26.177826358975096 24 25.08676298208648 25.165579582473374 24.480249106481512 25.26740832895863 25 25.437698210086513 24.179149557375755 24.460760695254464 25.922391537283275 26 24.8774962785045 24.86778802936925 25.22620220485125 25.028513487275 27 26.012714210719345 24.56036014008644 24.342607707630684 25.084317941563533 28 24.83485189526597 24.288960642038877 25.333496336034862 25.542691126660287 29 25.043111817456147 24.45342557368561 24.83844754309384 25.665015065764397 30 24.767109890188916 24.932509690270894 25.36902133657421 24.93135908296598 31 25.449420022005363 24.238909224274938 24.346347181371666 25.96532357234803 32 25.074106301732385 24.59027593001431 24.319307909706094 26.016309858547217 33 24.884184183464335 23.981748491625737 24.793933422984818 26.34013390192511 34 25.281790920270105 24.307586097787237 25.51299107560209 24.897631906340564 35 26.028319322292297 24.004688724767544 25.01427472187664 24.95271723106352 36 25.101720877050422 24.66391479752907 24.504052295102007 25.7303120303185 37 25.983445637400493 24.53037243720201 24.175769648417557 25.310412276979942 38 25.059579884507794 24.14074803857411 25.016719762399592 25.78295231451851 39 25.718374479529977 23.752633812033913 24.630259533860215 25.898732174575894 40 25.89305105100786 24.265373192288052 24.880300883810236 24.96127487289385 41 24.7625793739258 24.504411859884794 25.64674917479882 25.08625959139058 42 26.08218212675378 25.13983474402583 24.68534485858317 24.09263827063722 43 25.186434339875014 23.567889426637997 25.05418641276599 26.191489820721 44 24.514479673802832 24.21165421373969 25.365713340572572 25.90815277188491 45 25.062887880509432 24.360801685639704 25.06734648381599 25.50896395003488 46 24.941678508350545 23.849103387968082 25.387539480269933 25.821678623411444 47 24.7625793739258 24.02561539512574 25.467901651840613 25.743903579107847 48 25.264963288435677 25.083167334258615 24.621486153160216 25.030383224145492 49 24.42933473323889 24.758767987228257 25.265610505044695 25.54628677448816 50 24.20016554374504 25.251965202733555 24.854358179996822 25.693511073524576 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 10.0 2 13.0 3 51.0 4 89.0 5 107.5 6 126.0 7 137.5 8 149.0 9 189.5 10 230.0 11 335.0 12 440.0 13 781.0 14 1122.0 15 1633.5 16 2145.0 17 2540.5 18 2936.0 19 3238.0 20 3540.0 21 4195.5 22 4851.0 23 5247.0 24 5643.0 25 6480.5 26 7318.0 27 9389.5 28 11461.0 29 13373.5 30 15286.0 31 16678.5 32 18071.0 33 21423.5 34 24776.0 35 28857.5 36 32939.0 37 40302.0 38 47665.0 39 51759.5 40 55854.0 41 61937.5 42 68021.0 43 70520.5 44 73020.0 45 81737.5 46 90455.0 47 97588.0 48 104721.0 49 108607.5 50 112494.0 51 110087.5 52 107681.0 53 104207.0 54 100733.0 55 102335.5 56 103938.0 57 99759.5 58 95581.0 59 88352.0 60 81123.0 61 71685.5 62 62248.0 63 54454.5 64 46661.0 65 39622.5 66 32584.0 67 27573.5 68 22563.0 69 20562.0 70 18561.0 71 14865.5 72 11170.0 73 10570.5 74 9971.0 75 7432.0 76 4893.0 77 4276.0 78 3659.0 79 3037.0 80 2415.0 81 1913.0 82 1411.0 83 1200.0 84 989.0 85 803.5 86 618.0 87 449.5 88 281.0 89 185.5 90 90.0 91 54.0 92 18.0 93 11.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015317459746722566 2 0.004458603306557743 3 5.033906959016806E-4 4 1.438259131147659E-4 5 0.0 6 6.472166090164465E-4 7 0.0 8 7.191295655738294E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.438259131147659E-4 47 0.0 48 0.0 49 0.0 50 7.191295655738294E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1390570.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.07175550149211 #Duplication Level Percentage of deduplicated Percentage of total 1 80.14645759406156 42.5351320174274 2 12.180050123151846 12.928332842636669 3 3.330368618989204 5.302455272305108 4 1.3317983218154315 2.827234996507443 5 0.711496901717385 1.888019480400711 6 0.44805561879605593 1.426745895108842 7 0.29496388125693224 1.095797569148734 8 0.21776434363856684 0.9245708802023143 9 0.15503102623610907 0.740499184759337 >10 0.9397549542762679 9.607688750558108 >50 0.1207146628989228 4.442553660404417 >100 0.1131918898979281 12.077825977153983 >500 0.008308892882778215 2.8877590136627704 >1k 0.0020431703810110365 1.3153844597243292 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1526 0.10973917170656637 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1573886967214884E-4 2 0.0 0.0 0.0 0.0 3.595647827869147E-4 3 0.0 0.0 0.0 0.0 3.595647827869147E-4 4 0.0 0.0 0.0 0.0 3.595647827869147E-4 5 0.0 0.0 0.0 0.0 3.595647827869147E-4 6 0.0 0.0 0.0 0.0 5.753036524590635E-4 7 0.0 0.0 0.0 0.0 5.753036524590635E-4 8 0.0 0.0 0.0 0.0 5.753036524590635E-4 9 0.0 0.0 0.0 0.0 5.753036524590635E-4 10 0.0 0.0 0.0 0.0 7.191295655738294E-4 11 0.0 0.0 0.0 0.0 7.191295655738294E-4 12 0.0 0.0 0.0 0.0 0.0010067813918033612 13 0.0 0.0 0.0 0.0 0.001294433218032893 14 0.0 0.0 0.0 0.0 0.0013663461745902759 15 0.0 0.0 0.0 0.0 0.0015101720877050417 16 0.0 0.0 0.0 0.0 0.0015101720877050417 17 0.0 0.0 0.0 7.191295655738294E-5 0.0015820850442624247 18 0.0 0.0 0.0 7.191295655738294E-5 0.0016539980008198076 19 0.0 0.0 0.0 1.438259131147659E-4 0.0016539980008198076 20 0.0 0.0 0.0 2.1573886967214884E-4 0.0016539980008198076 21 0.0 0.0 0.0 2.876518262295318E-4 0.0016539980008198076 22 0.0 0.0 0.0 4.314777393442977E-4 0.0017259109573771907 23 0.0 0.0 0.0 0.00122252026147551 0.0017259109573771907 24 0.0 0.0 0.0 0.0021573886967214883 0.0017259109573771907 25 0.0 0.0 0.0 0.002804605305737935 0.0017259109573771907 26 0.0 0.0 0.0 0.003811386697541296 0.0018697368704919566 27 0.0 0.0 0.0 0.00489008104590204 0.0018697368704919566 28 0.0 0.0 0.0 0.011290334179509122 0.0018697368704919566 29 0.0 0.0 0.0 0.025529099577870945 0.0019416498270493395 30 0.0 0.0 0.0 0.0560921061147587 0.0019416498270493395 31 0.0 0.0 0.0 0.11700238031886205 0.0019416498270493395 32 0.0 0.0 0.0 0.18841194618034332 0.0019416498270493395 33 0.0 0.0 0.0 0.26197890073854607 0.0019416498270493395 34 7.191295655738294E-5 0.0 0.0 0.34503836556232337 0.0021573886967214883 35 7.191295655738294E-5 0.0 0.0 0.4334913021279044 0.0021573886967214883 36 7.191295655738294E-5 0.0 0.0 0.5660987940197185 0.0021573886967214883 37 7.191295655738294E-5 0.0 0.0 0.7587536046369474 0.0021573886967214883 38 7.191295655738294E-5 0.0 0.0 1.0158424243295914 0.0023731275663936373 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTATA 215 0.0 20.467157 2 ATACCGT 400 0.0 20.349834 6 ACCGTCG 415 0.0 20.144415 8 CCGTCGT 410 0.0 19.316916 9 GTCGTAG 425 0.0 19.152786 11 CGCAATA 425 0.0 19.152786 36 TACCGTC 425 0.0 18.635143 7 CGATTTA 215 0.0 18.418455 18 TAGGACG 325 0.0 18.276773 4 TGTAGGA 560 0.0 18.07323 2 CAATACG 475 0.0 18.06301 38 GTATTAA 110 2.7905407E-6 18.004385 1 GTATCAA 3125 0.0 17.815538 1 CTAGCGG 470 0.0 17.787088 29 AATACGA 500 0.0 17.15986 39 CGTCGTA 465 0.0 17.032118 10 CGATGTA 195 4.9112714E-11 16.922937 36 CTTATAG 105 3.7752667E-5 16.761768 3 TCTATAC 105 3.7752667E-5 16.761768 3 TCTAGCG 500 0.0 16.719864 28 >>END_MODULE