##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062694_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1619828 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27285427835548 32.0 32.0 32.0 32.0 32.0 2 31.39330101714503 32.0 32.0 32.0 32.0 32.0 3 31.47250263608235 32.0 32.0 32.0 32.0 32.0 4 31.58351010107246 32.0 32.0 32.0 32.0 32.0 5 31.50850151991446 32.0 32.0 32.0 32.0 32.0 6 35.0955836051729 36.0 36.0 36.0 36.0 36.0 7 35.11469365883291 36.0 36.0 36.0 36.0 36.0 8 35.05220492546122 36.0 36.0 36.0 36.0 36.0 9 35.186109883271556 36.0 36.0 36.0 36.0 36.0 10 35.05626091165235 36.0 36.0 36.0 36.0 36.0 11 35.19698140790257 36.0 36.0 36.0 36.0 36.0 12 35.098160421970725 36.0 36.0 36.0 36.0 36.0 13 35.14909175542095 36.0 36.0 36.0 36.0 36.0 14 35.10956163246962 36.0 36.0 36.0 36.0 36.0 15 35.0640845818198 36.0 36.0 36.0 36.0 36.0 16 35.0770810234173 36.0 36.0 36.0 36.0 36.0 17 35.04403553957581 36.0 36.0 36.0 36.0 36.0 18 35.06094968107725 36.0 36.0 36.0 36.0 36.0 19 35.04621046185151 36.0 36.0 36.0 36.0 36.0 20 35.04099632800519 36.0 36.0 36.0 36.0 36.0 21 35.03598159804621 36.0 36.0 36.0 36.0 36.0 22 35.01699563163496 36.0 36.0 36.0 36.0 36.0 23 34.974852885615014 36.0 36.0 36.0 36.0 36.0 24 34.95043177423776 36.0 36.0 36.0 32.0 36.0 25 34.92200838607556 36.0 36.0 36.0 32.0 36.0 26 34.880157029017894 36.0 36.0 36.0 32.0 36.0 27 34.85741942971723 36.0 36.0 36.0 32.0 36.0 28 34.84864689337387 36.0 36.0 36.0 32.0 36.0 29 34.8196746815094 36.0 36.0 36.0 32.0 36.0 30 34.81447721609949 36.0 36.0 36.0 32.0 36.0 31 34.80293648461441 36.0 36.0 36.0 32.0 36.0 32 34.776455895317284 36.0 36.0 36.0 32.0 36.0 33 34.751757594016155 36.0 36.0 36.0 32.0 36.0 34 34.73183387371993 36.0 36.0 36.0 32.0 36.0 35 34.70853201697958 36.0 36.0 36.0 32.0 36.0 36 34.67399995555083 36.0 36.0 36.0 32.0 36.0 37 34.67695952903642 36.0 36.0 36.0 32.0 36.0 38 34.63359319631467 36.0 36.0 36.0 32.0 36.0 39 34.62695421983075 36.0 36.0 36.0 32.0 36.0 40 34.61307743785142 36.0 36.0 36.0 32.0 36.0 41 34.5762827905185 36.0 36.0 36.0 32.0 36.0 42 34.55187711287865 36.0 36.0 36.0 32.0 36.0 43 34.53733421079275 36.0 36.0 36.0 32.0 36.0 44 34.506772941324634 36.0 36.0 36.0 32.0 36.0 45 34.47538627557988 36.0 36.0 36.0 32.0 36.0 46 34.47079196062792 36.0 36.0 36.0 32.0 36.0 47 34.448356862580475 36.0 36.0 36.0 32.0 36.0 48 34.403507656368454 36.0 36.0 36.0 32.0 36.0 49 34.393927626883844 36.0 36.0 36.0 32.0 36.0 50 33.86891447733957 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 9.0 21 43.0 22 128.0 23 429.0 24 1090.0 25 2537.0 26 5321.0 27 10032.0 28 16487.0 29 25723.0 30 37172.0 31 53473.0 32 78877.0 33 128798.0 34 285173.0 35 974534.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1654698558023 17.915672068471988 11.27241473417215 26.64644334155356 2 16.69557003639417 20.491984948433878 35.779572962744595 27.032872052427358 3 18.836560650640997 23.788351530850996 28.361828304167506 29.0132595143405 4 12.555623326978735 15.523970505437628 35.736104663222676 36.18430150436097 5 14.59778445612744 36.34268576663695 33.394286306941225 15.665243470294376 6 34.790390031472676 35.10808004356045 16.43857519795434 13.662954727012542 7 30.499657988379013 30.258768214896893 20.596199102620773 18.645374694103324 8 28.516378600924668 32.37358063546292 19.448249720494843 19.661791043117567 9 27.48044854145008 14.013401422867119 18.587837721041986 39.918312314640815 10 15.985956533656658 26.364404121919115 31.418891388468406 26.23074795595582 11 37.86179767234546 21.18342194356438 21.740765068883857 19.214015315206307 12 24.662248090538007 23.844630417550505 28.311215758710183 23.1819057332013 13 29.272120249804303 19.14968749768494 25.333553932886705 26.24463831962406 14 23.46298495889687 19.638196154159576 24.80849818622718 32.090320700716376 15 25.434799250290773 26.935020261410468 22.11543447822855 25.514746010070205 16 26.095486681301967 25.628276582451964 23.54793224959687 24.7283044866492 17 24.366537681778556 25.747857179898116 25.00160510869055 24.884000029632773 18 25.25447146240218 24.58495593359295 26.0711013761955 24.089471227809373 19 25.60432342199295 25.103714715389536 25.23872905024484 24.05323281237267 20 25.68068955469346 24.246895349382775 24.962959030218023 25.109456065705743 21 26.791239563706764 24.28683786179767 24.410678170768747 24.511244403726813 22 25.831137626957922 24.359623367419257 24.774852638675217 25.034386366947604 23 24.314309914385973 24.128611185878995 25.5290685183859 26.02801038134913 24 24.595574344930448 25.126803586553635 25.18273545092442 25.0948866175915 25 24.82152426060051 24.36838973026766 25.274597055983723 25.53548895314811 26 24.497662714806758 25.271633778401164 25.68383803712493 24.54686546966715 27 25.446405420822458 24.68367011806192 24.756949503280595 25.11297495783503 28 24.389503083043383 24.69996814476599 25.87645107999121 25.034077692199418 29 24.489884111152545 24.800163968026233 25.59561879409419 25.114333126727033 30 24.46339981775843 25.06216709428408 25.853238738927836 24.62119434902965 31 25.10001061841134 24.867702002928706 24.694350264349055 25.337937114310904 32 24.713055954088954 24.736576969900508 24.95388399262144 25.5964830833891 33 24.281652126028195 24.46704217978699 25.50110258620051 25.750203107984305 34 24.974503465800073 24.592549332398256 25.690073267038226 24.742873934763445 35 25.6470440071415 24.508095921295347 25.453196265282486 24.39166380628067 36 24.53729655247347 25.00790207355349 25.165264460177255 25.289536913795786 37 25.542403267507414 24.81399259674484 24.956353390606903 24.687250745140844 38 24.58625236753532 24.529888358517077 25.554811992384373 25.329047281563227 39 25.078588590887428 24.478771820217947 24.965490163153127 25.477149425741498 40 25.2497796062298 24.589586054815697 25.670935432650875 24.489698906303634 41 24.16713379445225 25.059882901147528 25.93763041508111 24.83535288931911 42 25.554379847736918 25.004136241625652 25.411710379126674 24.029773531510752 43 24.66144553619273 23.932849660581248 25.731188743496226 25.674516059729797 44 24.19682830522747 24.650703654955958 25.542218062658506 25.610249977158066 45 24.400985783675797 24.858688700281757 25.619139809905743 25.1211857061367 46 24.03974254024815 24.56214432908226 25.830613905444167 25.567499225225426 47 24.29044848026887 24.333354323242126 26.2843046104952 25.091892585993804 48 24.977405008432992 25.19279824771519 25.239593339539752 24.590203404312064 49 23.885437219260318 25.26632457273241 25.535797627896294 25.312440580110973 50 23.833115408692045 25.354451650979797 25.53440925136404 25.278023688964126 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 37.0 1 42.5 2 48.0 3 145.5 4 243.0 5 300.5 6 358.0 7 316.5 8 275.0 9 362.0 10 449.0 11 654.5 12 860.0 13 1468.0 14 2076.0 15 2789.0 16 3502.0 17 4012.5 18 4523.0 19 4785.0 20 5047.0 21 6140.5 22 7234.0 23 7821.5 24 8409.0 25 10167.5 26 11926.0 27 14640.5 28 17355.0 29 19537.0 30 21719.0 31 23667.5 32 25616.0 33 29229.0 34 32842.0 35 37612.5 36 42383.0 37 50887.0 38 59391.0 39 64704.5 40 70018.0 41 76791.5 42 83565.0 43 85733.0 44 87901.0 45 96130.0 46 104359.0 47 111873.0 48 119387.0 49 123323.0 50 127259.0 51 120968.0 52 114677.0 53 111718.5 54 108760.0 55 110505.5 56 112251.0 57 109647.5 58 107044.0 59 98225.0 60 89406.0 61 78596.0 62 67786.0 63 59484.0 64 51182.0 65 44014.0 66 36846.0 67 33306.5 68 29767.0 69 27371.5 70 24976.0 71 19389.5 72 13803.0 73 12255.0 74 10707.0 75 7872.0 76 5037.0 77 4445.0 78 3853.0 79 3339.5 80 2826.0 81 2268.0 82 1710.0 83 1424.0 84 1138.0 85 951.0 86 764.0 87 563.0 88 362.0 89 229.5 90 97.0 91 63.0 92 29.0 93 20.5 94 12.0 95 9.5 96 7.0 97 4.5 98 2.0 99 3.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01518679761061051 2 0.0038893018271075695 3 6.173494963662809E-4 4 2.4693979854651234E-4 5 0.0 6 6.173494963662809E-4 7 0.0 8 6.173494963662808E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2346989927325617E-4 47 1.2346989927325617E-4 48 0.0 49 0.0 50 1.2346989927325617E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1619828.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.42216478334395 #Duplication Level Percentage of deduplicated Percentage of total 1 80.62458254865807 45.49013482148703 2 12.292500999764348 13.871390340162487 3 3.317968158324687 5.616208385246512 4 1.280547084882505 2.8900495454428574 5 0.6457836874113564 1.821825681275952 6 0.3752286126760747 1.2702726369501018 7 0.2589744258719696 1.0228328411854115 8 0.17648686663746235 0.796621685721196 9 0.13189164294454114 0.6697450810586578 >10 0.7210875943078212 7.617438605027902 >50 0.08134084480109535 3.247037606424077 >100 0.0808779988990772 9.777036881313276 >500 0.009876363223194682 3.6963351789544325 >1k 0.0028531715978117973 2.213070709750051 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2034 0.1255688875609015 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2010 0.12408724876962246 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1770 0.10927086085683173 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1734 0.1070484026699131 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1666 0.1028504260946224 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1639 0.10118358245443343 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1636 0.10099837760552356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.173494963662808E-5 0.0 5 0.0 0.0 0.0 6.173494963662808E-5 0.0 6 0.0 0.0 0.0 6.173494963662808E-5 0.0 7 0.0 0.0 0.0 1.2346989927325617E-4 0.0 8 0.0 0.0 0.0 1.2346989927325617E-4 0.0 9 0.0 0.0 0.0 1.8520484890988427E-4 0.0 10 0.0 0.0 0.0 1.8520484890988427E-4 0.0 11 0.0 0.0 0.0 1.8520484890988427E-4 0.0 12 0.0 0.0 0.0 2.4693979854651234E-4 6.173494963662808E-5 13 0.0 0.0 0.0 3.0867474818314043E-4 6.173494963662808E-5 14 0.0 0.0 0.0 3.7040969781976853E-4 6.173494963662808E-5 15 0.0 0.0 0.0 4.3214464745639663E-4 6.173494963662808E-5 16 0.0 0.0 0.0 5.556145467296528E-4 6.173494963662808E-5 17 0.0 0.0 0.0 5.556145467296528E-4 6.173494963662808E-5 18 0.0 0.0 0.0 7.408193956395371E-4 6.173494963662808E-5 19 0.0 0.0 0.0 9.260242445494213E-4 6.173494963662808E-5 20 0.0 0.0 0.0 0.0010494941438226775 1.2346989927325617E-4 21 0.0 0.0 0.0 0.0012346989927325617 1.8520484890988427E-4 22 0.0 0.0 1.2346989927325617E-4 0.001543373740915702 1.8520484890988427E-4 23 0.0 0.0 1.2346989927325617E-4 0.0027163377840116357 1.8520484890988427E-4 24 0.0 0.0 1.2346989927325617E-4 0.004012771726380825 1.8520484890988427E-4 25 0.0 0.0 1.2346989927325617E-4 0.0045683862731104785 1.8520484890988427E-4 26 0.0 0.0 1.2346989927325617E-4 0.006420434762209321 2.4693979854651234E-4 27 0.0 0.0 1.2346989927325617E-4 0.008581157999491305 2.4693979854651234E-4 28 0.0 0.0 1.2346989927325617E-4 0.016544966502616328 2.4693979854651234E-4 29 0.0 0.0 1.2346989927325617E-4 0.03358381260232568 2.4693979854651234E-4 30 0.0 0.0 1.2346989927325617E-4 0.06679721550683158 2.4693979854651234E-4 31 0.0 0.0 1.2346989927325617E-4 0.13353269606402654 2.4693979854651234E-4 32 0.0 0.0 1.2346989927325617E-4 0.21107179280763141 2.4693979854651234E-4 33 0.0 0.0 1.2346989927325617E-4 0.29151243218415784 2.4693979854651234E-4 34 0.0 0.0 1.2346989927325617E-4 0.38436179643764645 2.4693979854651234E-4 35 0.0 0.0 1.2346989927325617E-4 0.4883851865753648 2.4693979854651234E-4 36 0.0 0.0 1.2346989927325617E-4 0.6392654034872839 2.4693979854651234E-4 37 0.0 0.0 1.2346989927325617E-4 0.8516953651869211 2.4693979854651234E-4 38 0.0 0.0 1.2346989927325617E-4 1.147344038996733 2.4693979854651234E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 185 0.0 21.405285 4 TACGACG 480 0.0 16.958239 5 ATACGTA 80 0.0019888184 16.499908 25 TCTATAC 200 7.2759576E-11 16.499908 3 ACGACGG 510 0.0 16.392065 6 CGTTTAT 540 0.0 16.296204 31 CCTATTC 635 0.0 16.283373 3 TAGATCG 95 3.3473363E-4 16.210434 5 ATACCGT 450 0.0 16.133242 6 CGACGGT 520 0.0 16.076834 7 CTACGAC 510 0.0 15.960694 4 ACCGTCG 400 0.0 15.94991 8 TACACTA 125 9.444653E-6 15.8399105 5 TGGTCGG 515 0.0 15.805736 37 ATTACAC 210 1.5097612E-10 15.714198 3 CTATTCC 630 0.0 15.714197 4 GTATAAT 225 2.5465852E-11 15.64822 1 GTATAGA 170 4.4796252E-8 15.53316 1 CATCGTT 540 0.0 15.481394 28 ATCGTTT 530 0.0 15.358405 29 >>END_MODULE