##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062693_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2312435 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.197457225824724 32.0 32.0 32.0 32.0 32.0 2 31.308607160849927 32.0 32.0 32.0 32.0 32.0 3 31.43622112621544 32.0 32.0 32.0 32.0 32.0 4 31.55859689029097 32.0 32.0 32.0 32.0 32.0 5 31.476249494580387 32.0 32.0 32.0 32.0 32.0 6 35.05333901277225 36.0 36.0 36.0 36.0 36.0 7 35.07426111436646 36.0 36.0 36.0 36.0 36.0 8 35.0048982998441 36.0 36.0 36.0 36.0 36.0 9 35.14618529818136 36.0 36.0 36.0 36.0 36.0 10 35.015123019674064 36.0 36.0 36.0 36.0 36.0 11 35.159085552674995 36.0 36.0 36.0 36.0 36.0 12 35.06966249862158 36.0 36.0 36.0 36.0 36.0 13 35.113808171905376 36.0 36.0 36.0 36.0 36.0 14 35.06789034070147 36.0 36.0 36.0 36.0 36.0 15 35.02787883767544 36.0 36.0 36.0 36.0 36.0 16 35.034114256184495 36.0 36.0 36.0 36.0 36.0 17 35.01230304851812 36.0 36.0 36.0 36.0 36.0 18 35.02824987513163 36.0 36.0 36.0 36.0 36.0 19 35.0070557658918 36.0 36.0 36.0 36.0 36.0 20 35.00354604561858 36.0 36.0 36.0 36.0 36.0 21 34.988570057104305 36.0 36.0 36.0 36.0 36.0 22 34.972928103925085 36.0 36.0 36.0 36.0 36.0 23 34.92812943931397 36.0 36.0 36.0 32.0 36.0 24 34.900769967588275 36.0 36.0 36.0 32.0 36.0 25 34.86977493421437 36.0 36.0 36.0 32.0 36.0 26 34.820226298252706 36.0 36.0 36.0 32.0 36.0 27 34.799022242787366 36.0 36.0 36.0 32.0 36.0 28 34.77795743447924 36.0 36.0 36.0 32.0 36.0 29 34.74706964736306 36.0 36.0 36.0 32.0 36.0 30 34.732904060006014 36.0 36.0 36.0 32.0 36.0 31 34.729023734721196 36.0 36.0 36.0 32.0 36.0 32 34.68573862616679 36.0 36.0 36.0 32.0 36.0 33 34.67068090562545 36.0 36.0 36.0 32.0 36.0 34 34.654542938504214 36.0 36.0 36.0 32.0 36.0 35 34.6183455967411 36.0 36.0 36.0 32.0 36.0 36 34.5882241014342 36.0 36.0 36.0 32.0 36.0 37 34.57657836868928 36.0 36.0 36.0 32.0 36.0 38 34.52677632019927 36.0 36.0 36.0 32.0 36.0 39 34.490459191285375 36.0 36.0 36.0 32.0 36.0 40 34.47914903554046 36.0 36.0 36.0 32.0 36.0 41 34.44950625639207 36.0 36.0 36.0 32.0 36.0 42 34.4012026283982 36.0 36.0 36.0 32.0 36.0 43 34.404610724193326 36.0 36.0 36.0 32.0 36.0 44 34.37146773855265 36.0 36.0 36.0 32.0 36.0 45 34.31128701995948 36.0 36.0 36.0 32.0 36.0 46 34.316949016945344 36.0 36.0 36.0 32.0 36.0 47 34.27848826021056 36.0 36.0 36.0 32.0 36.0 48 34.242694389247696 36.0 36.0 36.0 32.0 36.0 49 34.23087092177726 36.0 36.0 36.0 32.0 36.0 50 33.70358647918752 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 23.0 21 95.0 22 312.0 23 789.0 24 2033.0 25 4620.0 26 9064.0 27 16734.0 28 27160.0 29 40068.0 30 56795.0 31 80605.0 32 119023.0 33 191231.0 34 417391.0 35 1346487.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.215635433025575 17.761191383129137 12.271779086177792 25.7513940976675 2 15.951147618400988 19.584631072923955 37.80606256654474 26.65815874213031 3 19.402149869898146 23.131534553210294 27.83773182974193 29.628583747149627 4 12.47111805714419 15.425627834949454 35.32529186816817 36.77796223973818 5 14.727944667826195 36.43368848581192 32.90186876684913 15.936498079512756 6 35.58430168822627 34.58340522749475 16.085437507865112 13.746855576413871 7 31.29486073980922 29.806558803408013 19.678399469995682 19.220180986787085 8 28.25692397840372 33.50835807276745 18.58923602176926 19.64548192705957 9 26.993666849014136 14.741819770069212 18.32064468839124 39.94386869252541 10 16.308220555388584 26.490993260351104 30.647218192078913 26.553567992181403 11 37.93399598258978 21.07263555516155 21.470657553617723 19.522710908630945 12 25.241487868848207 23.27075139409324 28.01190087505162 23.47585986200693 13 29.800837645166244 19.093163699736426 25.070931723486282 26.035066931611052 14 23.594609145770583 19.623643475384174 24.499975134436212 32.28177224440903 15 25.32161985093635 27.113540488705627 22.07011224099272 25.494727419365297 16 26.08341423650827 25.803709077228117 23.47689772901725 24.635978957246365 17 24.155965464975232 26.12674518418896 24.95862586407834 24.758663486757467 18 25.32979305364259 24.50637531433316 26.244586334318587 23.919245297705665 19 25.706106333799656 25.037071312274723 25.00113516704253 24.25568718688309 20 25.811103879676615 24.073195570902534 25.247023159569892 24.86867738985096 21 26.738005608806304 24.21222650582611 24.229610778248905 24.820157107118686 22 25.68400841537167 24.359690110208504 25.0102165033828 24.946084971037024 23 24.237524514202562 24.141521815748334 25.45615336214856 26.16480030790055 24 24.7096675149788 25.05960167529033 25.179864515110694 25.05086629462017 25 25.060034119877965 24.505899625286766 25.02011948443956 25.413946770395707 26 24.488904552992842 25.341339324132356 25.64184506807759 24.527911054797215 27 25.414206237148285 24.764847444360598 24.925284386371942 24.89566193211917 28 24.588626274900697 24.466157967683415 25.520587605705675 25.42462815171021 29 24.316964584950497 24.870839612789116 25.638385511376537 25.173810290883853 30 24.61202152709157 24.762858199257494 25.89257643998642 24.732543833664515 31 25.225919863693463 24.69669417734985 24.580453072194462 25.496932886762224 32 24.74287925930891 24.822622041268186 24.798188922067 25.636309777355905 33 24.302650669099886 24.530030033276613 25.421946995266893 25.745372302356607 34 25.098348710342126 24.77241522464415 25.520674094623203 24.608561970390518 35 25.71553362581002 24.48341250672992 25.463764386890876 24.337289480569183 36 24.47649339332781 25.18116184887359 25.195778475935537 25.14656628186306 37 25.61710923766506 24.726662587272724 24.91023531472236 24.745992860339857 38 24.673688125287846 24.644757582375288 25.25069893856476 25.43085535377211 39 25.36166421975104 24.385680029925165 24.919316651062626 25.33333909926117 40 25.655294094752932 24.70698635853548 25.109073336115394 24.52864621059619 41 24.472039214075206 25.008659702867327 25.82563401782104 24.693667065236426 42 25.8668892314811 25.189032340368485 25.07309394642444 23.870984481725973 43 24.943490303511233 24.138667681469965 25.312711492431138 25.60513052258766 44 24.44886018417815 24.869412545649933 25.28788917310108 25.393838097070837 45 24.74002512503054 24.999621610985823 25.128014409053662 25.132338854929976 46 24.622053587761105 24.522980361359974 25.365037918969257 25.489928131909668 47 24.928235789648483 24.47875269088761 25.796714630558103 24.796296888905804 48 25.52473907374694 25.417406327096764 24.427886621678017 24.629967977478287 49 24.523024430956976 25.101029866785446 25.059212475161463 25.316733227096112 50 24.45595227541531 25.763880930707238 24.541446570390086 25.238720223487366 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 25.0 2 27.0 3 104.0 4 181.0 5 232.5 6 284.0 7 271.0 8 258.0 9 323.0 10 388.0 11 652.5 12 917.0 13 1768.5 14 2620.0 15 3658.5 16 4697.0 17 5261.5 18 5826.0 19 6180.5 20 6535.0 21 7384.5 22 8234.0 23 9230.5 24 10227.0 25 11738.5 26 13250.0 27 17039.0 28 20828.0 29 24437.5 30 28047.0 31 31727.0 32 35407.0 33 41255.5 34 47104.0 35 54246.5 36 61389.0 37 72071.5 38 82754.0 39 90099.5 40 97445.0 41 106404.5 42 115364.0 43 119403.5 44 123443.0 45 137294.5 46 151146.0 47 163613.5 48 176081.0 49 180005.0 50 183929.0 51 175693.5 52 167458.0 53 165442.0 54 163426.0 55 165987.5 56 168549.0 57 162486.0 58 156423.0 59 144421.0 60 132419.0 61 116458.5 62 100498.0 63 87525.0 64 74552.0 65 63380.0 66 52208.0 67 45072.0 68 37936.0 69 35152.0 70 32368.0 71 24851.5 72 17335.0 73 15468.0 74 13601.0 75 9794.0 76 5987.0 77 5324.5 78 4662.0 79 4071.5 80 3481.0 81 2749.5 82 2018.0 83 1756.5 84 1495.0 85 1221.5 86 948.0 87 697.0 88 446.0 89 290.0 90 134.0 91 84.5 92 35.0 93 25.5 94 16.0 95 18.0 96 20.0 97 16.0 98 12.0 99 8.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015827471907318477 2 0.003502801159816384 3 6.919113402106438E-4 4 1.7297783505266094E-4 5 4.3244458763165234E-5 6 3.459556701053219E-4 7 4.3244458763165234E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.7297783505266094E-4 47 4.3244458763165234E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2312435.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.17560198566288 #Duplication Level Percentage of deduplicated Percentage of total 1 76.30805213247842 39.81418556365408 2 13.960947747377888 14.568417060196511 3 4.384422631209149 6.8627967042870415 4 1.8657104938797353 3.8937827259657434 5 0.9455148393161613 2.466640296384901 6 0.5578945658563322 1.7465090890850508 7 0.38679972779422134 1.4127056051887825 8 0.27082185833201466 1.130423479147902 9 0.1887994213579162 0.8865651117504687 >10 0.9712403067761247 8.95449366099608 >50 0.07549141348798674 2.762084327922198 >100 0.06895189546384385 7.761509273620327 >500 0.010096244386295338 3.5857448434771193 >1k 0.005256722283773518 4.1541422583238115 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3348 0.14478244793907719 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2681 0.11593839394404601 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2535 0.10962470296462387 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2535 0.10962470296462387 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2529 0.10936523621204487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.3244458763165234E-5 2 0.0 0.0 0.0 0.0 4.3244458763165234E-5 3 0.0 0.0 0.0 0.0 4.3244458763165234E-5 4 0.0 0.0 0.0 0.0 4.3244458763165234E-5 5 0.0 4.3244458763165234E-5 0.0 0.0 4.3244458763165234E-5 6 0.0 4.3244458763165234E-5 0.0 0.0 8.648891752633047E-5 7 0.0 4.3244458763165234E-5 0.0 0.0 8.648891752633047E-5 8 0.0 4.3244458763165234E-5 0.0 0.0 8.648891752633047E-5 9 0.0 4.3244458763165234E-5 0.0 0.0 8.648891752633047E-5 10 0.0 4.3244458763165234E-5 0.0 0.0 8.648891752633047E-5 11 0.0 4.3244458763165234E-5 0.0 4.3244458763165234E-5 1.297333762894957E-4 12 0.0 4.3244458763165234E-5 0.0 8.648891752633047E-5 4.7568904639481757E-4 13 0.0 4.3244458763165234E-5 0.0 8.648891752633047E-5 4.7568904639481757E-4 14 0.0 4.3244458763165234E-5 0.0 8.648891752633047E-5 5.189335051579828E-4 15 0.0 4.3244458763165234E-5 0.0 1.7297783505266094E-4 6.054224226843133E-4 16 0.0 4.3244458763165234E-5 0.0 3.0271121134215666E-4 6.486668814474785E-4 17 0.0 4.3244458763165234E-5 0.0 3.892001288684871E-4 6.919113402106438E-4 18 0.0 4.3244458763165234E-5 0.0 6.054224226843133E-4 8.216447165001394E-4 19 0.0 4.3244458763165234E-5 0.0 6.054224226843133E-4 8.216447165001394E-4 20 0.0 4.3244458763165234E-5 0.0 7.784002577369742E-4 9.0813363402647E-4 21 0.0 4.3244458763165234E-5 0.0 9.946225515528003E-4 9.0813363402647E-4 22 0.0 4.3244458763165234E-5 0.0 0.0017297783505266094 9.0813363402647E-4 23 0.0 4.3244458763165234E-5 0.0 0.003675778994869045 9.0813363402647E-4 24 0.0 4.3244458763165234E-5 0.0 0.005146090592816663 9.0813363402647E-4 25 0.0 4.3244458763165234E-5 0.0 0.0064001798969484545 9.0813363402647E-4 26 0.0 4.3244458763165234E-5 0.0 0.007913735953659238 9.946225515528003E-4 27 0.0 4.3244458763165234E-5 0.0 0.010032714433054335 0.0010378670103159656 28 0.0 4.3244458763165234E-5 0.0 0.013492271134107553 0.0010378670103159656 29 0.0 4.3244458763165234E-5 0.0 0.020454628994977155 0.0010378670103159656 30 0.0 4.3244458763165234E-5 0.0 0.03169818827340012 0.0010378670103159656 31 0.0 4.3244458763165234E-5 0.0 0.06192606494885262 0.0010378670103159656 32 0.0 4.3244458763165234E-5 0.0 0.09634865412433215 0.0010378670103159656 33 0.0 4.3244458763165234E-5 0.0 0.12925768724310088 0.0010378670103159656 34 0.0 4.3244458763165234E-5 0.0 0.1669236108258178 0.0011243559278422961 35 0.0 4.3244458763165234E-5 0.0 0.2094761582487724 0.0011243559278422961 36 0.0 4.3244458763165234E-5 0.0 0.2715752010326777 0.0011243559278422961 37 0.0 4.3244458763165234E-5 0.0 0.36065878608479807 0.0011243559278422961 38 0.0 4.3244458763165234E-5 0.0 0.47434846817315945 0.0011676003866054614 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 390 0.0 21.43948 1 CGCAATA 735 0.0 20.952255 36 TCTAGCG 785 0.0 19.057213 28 CTAGCGG 790 0.0 18.936598 29 GTCCTAC 860 0.0 18.67754 1 CGGTCCA 900 0.0 18.333225 10 TAGCGGC 805 0.0 18.310452 30 GGCGTTA 705 0.0 18.099184 42 CGAATGC 820 0.0 17.975502 43 CAATACG 835 0.0 17.916061 38 AATACGA 860 0.0 17.651058 39 ATACGAA 865 0.0 17.294695 40 CCGGTCC 970 0.0 17.237013 9 TAGGACG 575 0.0 17.21729 4 CGCCGGT 940 0.0 17.085007 7 TACGAAT 865 0.0 17.040361 41 GCAATAC 905 0.0 17.016474 37 TCTTGCG 950 0.0 16.906626 2 TGTAGGA 1135 0.0 16.864796 2 GCCGGTC 945 0.0 16.761806 8 >>END_MODULE