##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062691_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1763320 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255544087289884 32.0 32.0 32.0 32.0 32.0 2 31.25871537781004 32.0 32.0 32.0 32.0 32.0 3 31.394316403148608 32.0 32.0 32.0 32.0 32.0 4 31.53726436494794 32.0 32.0 32.0 32.0 32.0 5 31.427168636435812 32.0 32.0 32.0 32.0 32.0 6 35.02957035591952 36.0 36.0 36.0 36.0 36.0 7 35.045871991470634 36.0 36.0 36.0 36.0 36.0 8 34.98230383594583 36.0 36.0 36.0 36.0 36.0 9 35.146137399904724 36.0 36.0 36.0 36.0 36.0 10 34.9809580790781 36.0 36.0 36.0 36.0 36.0 11 35.150740081210444 36.0 36.0 36.0 36.0 36.0 12 35.037498015107865 36.0 36.0 36.0 36.0 36.0 13 35.10544370845904 36.0 36.0 36.0 36.0 36.0 14 35.06328573372956 36.0 36.0 36.0 36.0 36.0 15 35.00095104688882 36.0 36.0 36.0 36.0 36.0 16 35.02190073270875 36.0 36.0 36.0 36.0 36.0 17 34.98632069051562 36.0 36.0 36.0 36.0 36.0 18 35.01191842660436 36.0 36.0 36.0 36.0 36.0 19 34.99327291699748 36.0 36.0 36.0 36.0 36.0 20 34.989180636526555 36.0 36.0 36.0 36.0 36.0 21 34.988396887689134 36.0 36.0 36.0 36.0 36.0 22 34.968275185445634 36.0 36.0 36.0 32.0 36.0 23 34.92220924165778 36.0 36.0 36.0 32.0 36.0 24 34.8958787968151 36.0 36.0 36.0 32.0 36.0 25 34.87063663997459 36.0 36.0 36.0 32.0 36.0 26 34.82262493478211 36.0 36.0 36.0 32.0 36.0 27 34.8069204682077 36.0 36.0 36.0 32.0 36.0 28 34.79258671143071 36.0 36.0 36.0 32.0 36.0 29 34.76792471020575 36.0 36.0 36.0 32.0 36.0 30 34.75781820656489 36.0 36.0 36.0 32.0 36.0 31 34.75800592064969 36.0 36.0 36.0 32.0 36.0 32 34.72249506612526 36.0 36.0 36.0 32.0 36.0 33 34.70744618106753 36.0 36.0 36.0 32.0 36.0 34 34.69491243790123 36.0 36.0 36.0 32.0 36.0 35 34.670557244289185 36.0 36.0 36.0 32.0 36.0 36 34.634985141664586 36.0 36.0 36.0 32.0 36.0 37 34.639693872921534 36.0 36.0 36.0 32.0 36.0 38 34.59769582378695 36.0 36.0 36.0 32.0 36.0 39 34.597322664065516 36.0 36.0 36.0 32.0 36.0 40 34.58506397023796 36.0 36.0 36.0 32.0 36.0 41 34.55084329560148 36.0 36.0 36.0 32.0 36.0 42 34.52861987614273 36.0 36.0 36.0 32.0 36.0 43 34.51827631966972 36.0 36.0 36.0 32.0 36.0 44 34.492269695801106 36.0 36.0 36.0 32.0 36.0 45 34.45052401152372 36.0 36.0 36.0 32.0 36.0 46 34.470489757956585 36.0 36.0 36.0 32.0 36.0 47 34.44330354104757 36.0 36.0 36.0 32.0 36.0 48 34.40926774493569 36.0 36.0 36.0 32.0 36.0 49 34.395382573781276 36.0 36.0 36.0 32.0 36.0 50 33.837518431141255 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 39.0 22 108.0 23 373.0 24 1005.0 25 2404.0 26 5075.0 27 9663.0 28 17005.0 29 27014.0 30 40635.0 31 59896.0 32 93113.0 33 158968.0 34 350447.0 35 997570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.11750192420149 17.7843862038298 11.15753268873765 26.940579183231062 2 16.90770926072016 20.41085658641492 35.39580193994815 27.285632212916767 3 18.77003327820992 23.740384593572564 28.533059304174635 28.956522824042885 4 12.798372159757912 15.440776989743199 35.8208218823831 35.94002896811579 5 14.79351450672595 36.18424335911803 33.36461901413243 15.657623120023592 6 34.7749748484955 35.287872721477854 16.319952090211952 13.617200339814689 7 30.46656307420094 30.28366944173491 20.595921330217998 18.653846153846153 8 28.607569811491956 32.10738833563959 19.34260372479187 19.942438128076585 9 27.650965224689788 13.748837420320758 18.19681056189461 40.40338679309484 10 15.779438785926548 26.307136537894426 31.644738334505362 26.268686341673664 11 38.187680058072274 20.84652814009936 21.73003198511898 19.23575981670939 12 24.53406074904158 23.587210489304265 28.313805775469003 23.56492298618515 13 29.663475716262504 18.998933829367328 25.00300569380487 26.3345847605653 14 23.68447020393349 19.185853957307806 24.571546854796633 32.55812898396207 15 25.57941836989316 26.48316811469274 22.004457500623822 25.932956014790282 16 26.470918494657802 25.474162375518905 22.916203525168434 25.138715604654855 17 24.537860399700566 25.3071478801352 24.825726470521516 25.329265249642717 18 25.595240795771613 24.41763264750584 25.477338202935375 24.509788353787172 19 25.931821790712974 24.896955742576505 24.862418619422453 24.308803847288072 20 25.800195086541294 24.022015289340562 24.67011092711476 25.507678697003378 21 27.04319125286392 24.030975659551302 23.942846448744415 24.98298663884037 22 26.12526370709797 24.093017716580086 24.424041013542634 25.3576775627793 23 24.794592019599392 23.888914093868387 25.005160719551757 26.311333166980468 24 24.980548057074156 24.90534900074859 24.62701041217703 25.487092530000226 25 25.27947281264887 24.16594832475104 24.787729963931675 25.76684889866842 26 25.00090737926185 24.73924188462673 25.09561508971713 25.1642356463943 27 25.903806456003448 24.455118753260894 24.267234534854705 25.373840255880953 28 24.91975364653041 24.203888120137016 25.279869791075924 25.596488442256653 29 25.00873352539528 24.620205067713176 24.94408275298868 25.426978653902864 30 25.019281809314247 24.69052696050632 25.209150919855727 25.08104031032371 31 25.32228977156727 24.60750175804732 24.33239570809609 25.73781276228932 32 25.253896059705554 24.52595104688882 24.36347344781435 25.85667944559127 33 24.964668919991833 24.05383027470907 24.893156091917522 26.088344713381577 34 25.33907628791144 24.36710296486174 25.189528843318286 25.10429190390854 35 26.22978245582197 24.151089989338292 24.7804709298369 24.838656625002837 36 25.000283556019326 24.666935099698296 24.675271646666516 25.65750969761586 37 26.133373409250733 24.408048454052583 24.3811106322165 25.077467504480182 38 24.93637002926298 24.147347049883177 25.16083297416238 25.755449946691467 39 25.380021777102286 24.30897398089967 24.40782160923712 25.90318263276093 40 25.665505977360887 24.262754349749336 25.008790236599143 25.062949436290634 41 24.68576321938162 24.71423224372207 25.27244062336955 25.327563913526756 42 25.89002563346415 24.702776580541254 24.81897783726153 24.588219948733073 43 25.11427307578885 23.711861715400495 25.046843454392846 26.1270217544178 44 24.897352721003564 24.26519293151555 24.973402445387112 25.864051902093777 45 24.890377242928114 24.553852959190618 25.101910033346186 25.453859764535082 46 24.79833495905451 24.24704534627861 25.157543724338183 25.7970759703287 47 24.911587233173783 24.009822380509494 25.599550847265384 25.479039539051335 48 25.50421931356759 24.953099834403282 24.573304902116462 24.969375949912664 49 24.455969421318876 24.730678492843047 25.206995894108843 25.60635619172924 50 24.474967674613797 24.915557017444367 24.98049134587029 25.628983962071544 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6.0 1 9.0 2 12.0 3 52.0 4 92.0 5 111.5 6 131.0 7 153.0 8 175.0 9 235.0 10 295.0 11 396.5 12 498.0 13 911.0 14 1324.0 15 1815.0 16 2306.0 17 2873.5 18 3441.0 19 3918.5 20 4396.0 21 5377.0 22 6358.0 23 6983.5 24 7609.0 25 9635.0 26 11661.0 27 14462.5 28 17264.0 29 19383.0 30 21502.0 31 23152.5 32 24803.0 33 28148.5 34 31494.0 35 36614.0 36 41734.0 37 51852.5 38 61971.0 39 67805.5 40 73640.0 41 81635.0 42 89630.0 43 91870.5 44 94111.0 45 103805.0 46 113499.0 47 121340.0 48 129181.0 49 132516.5 50 135852.0 51 131130.5 52 126409.0 53 123901.0 54 121393.0 55 123206.5 56 125020.0 57 123867.5 58 122715.0 59 111706.0 60 100697.0 61 89068.0 62 77439.0 63 68394.0 64 59349.0 65 51340.0 66 43331.0 67 39143.0 68 34955.0 69 32038.5 70 29122.0 71 22946.5 72 16771.0 73 14838.0 74 12905.0 75 9725.5 76 6546.0 77 5813.5 78 5081.0 79 4360.5 80 3640.0 81 2862.0 82 2084.0 83 1732.0 84 1380.0 85 1122.5 86 865.0 87 649.0 88 433.0 89 278.0 90 123.0 91 85.5 92 48.0 93 31.5 94 15.0 95 11.5 96 8.0 97 5.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01423451217022435 2 0.004366762697638546 3 2.2684481546174262E-4 4 1.1342240773087131E-4 5 0.0 6 3.402672231926139E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1763320.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.062393724002824 #Duplication Level Percentage of deduplicated Percentage of total 1 81.98201428712414 46.78089977538703 2 11.437527061589305 13.053053448346924 3 2.8829466271015187 4.935235065628585 4 1.1738182671646507 2.6792352048550407 5 0.6296303254310641 1.7964106765159706 6 0.3649596427502692 1.2495282496792364 7 0.26375233022952765 1.0535237519226364 8 0.1860208669204495 0.8491836759276018 9 0.13494222338212 0.6930113652560582 >10 0.7660622125425464 8.1589178384423 >50 0.08560756367204671 3.420820274424072 >100 0.08081673765765451 9.768983348620456 >500 0.009601496014603323 3.6998744022869676 >1k 0.0023003584201653797 1.8613229227072325 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2057 0.11665494635120113 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1859 0.10542612798584489 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1804 0.10230701177324593 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1769 0.10032211963795568 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.6711203865435654E-5 7 0.0 0.0 0.0 0.0 5.6711203865435654E-5 8 0.0 0.0 0.0 0.0 5.6711203865435654E-5 9 0.0 0.0 0.0 0.0 1.1342240773087131E-4 10 0.0 0.0 0.0 0.0 1.1342240773087131E-4 11 0.0 0.0 0.0 0.0 1.1342240773087131E-4 12 0.0 0.0 0.0 0.0 2.2684481546174262E-4 13 0.0 0.0 0.0 0.0 2.2684481546174262E-4 14 0.0 0.0 0.0 5.6711203865435654E-5 2.835560193271783E-4 15 0.0 0.0 0.0 5.6711203865435654E-5 3.969784270580496E-4 16 0.0 0.0 0.0 5.6711203865435654E-5 3.969784270580496E-4 17 0.0 0.0 0.0 5.6711203865435654E-5 5.671120386543566E-4 18 0.0 0.0 0.0 5.6711203865435654E-5 6.805344463852278E-4 19 0.0 0.0 0.0 1.1342240773087131E-4 6.805344463852278E-4 20 0.0 0.0 0.0 1.1342240773087131E-4 7.939568541160992E-4 21 0.0 0.0 0.0 1.7013361159630696E-4 7.939568541160992E-4 22 0.0 0.0 0.0 2.835560193271783E-4 7.939568541160992E-4 23 0.0 0.0 0.0 2.835560193271783E-4 8.506680579815348E-4 24 0.0 0.0 0.0 7.372456502506635E-4 8.506680579815348E-4 25 0.0 0.0 0.0 0.0012476464850395845 8.506680579815348E-4 26 0.0 0.0 0.0 0.0017580473198285053 8.506680579815348E-4 27 0.0 0.0 0.0 0.003175827416464397 8.506680579815348E-4 28 0.0 0.0 0.0 0.007656012521833813 9.073792618469705E-4 29 0.0 0.0 0.0 0.018828119683324637 9.073792618469705E-4 30 0.0 0.0 0.0 0.04043508835605562 9.640904657124062E-4 31 0.0 0.0 0.0 0.0879590771952907 9.640904657124062E-4 32 0.0 0.0 0.0 0.14410316902207201 9.640904657124062E-4 33 0.0 0.0 0.0 0.20257242020733615 9.640904657124062E-4 34 0.0 0.0 0.0 0.27011546401107 0.0010208016695778417 35 0.0 0.0 0.0 0.3469024340448699 0.0010208016695778417 36 0.0 0.0 0.0 0.4562416350974298 0.0010775128734432774 37 0.0 0.0 0.0 0.6171880316675362 0.0010775128734432774 38 0.0 0.0 0.0 0.8301953133861125 0.0011342240773087131 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTA 55 0.00448453 19.99991 9 CGTCGTA 470 0.0 18.72332 10 TCTAGCG 620 0.0 18.451529 28 CATATAG 205 0.0 18.244337 2 TACCGTC 495 0.0 18.22214 7 CGCAATA 645 0.0 18.077438 36 ATACCGT 525 0.0 18.018967 6 ACCGTCG 510 0.0 17.686193 8 CCGTCGT 500 0.0 17.59992 9 ATATAGC 175 1.9099389E-10 17.59992 3 TAGCGGC 640 0.0 17.53117 30 CTAGCGG 640 0.0 17.53117 29 GTCGTAG 500 0.0 17.159924 11 GTATCAA 2675 0.0 16.615837 1 ATACGAA 690 0.0 16.260796 40 TTACACT 285 0.0 16.210453 4 TATAGGG 205 1.05501385E-10 16.097488 4 GCAATAC 720 0.0 15.888817 37 CGGTCCA 720 0.0 15.888817 10 ATTCGTG 250 0.0 15.839929 44 >>END_MODULE