##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062690_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1078455 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.257918040159304 32.0 32.0 32.0 32.0 32.0 2 31.396867741352214 32.0 32.0 32.0 32.0 32.0 3 31.479050122629133 32.0 32.0 32.0 32.0 32.0 4 31.577962919176045 32.0 32.0 32.0 32.0 32.0 5 31.518992447529104 32.0 32.0 32.0 32.0 32.0 6 35.09024947726145 36.0 36.0 36.0 36.0 36.0 7 35.10135981566222 36.0 36.0 36.0 36.0 36.0 8 35.05208098622567 36.0 36.0 36.0 36.0 36.0 9 35.156186396279864 36.0 36.0 36.0 36.0 36.0 10 35.04866035207774 36.0 36.0 36.0 36.0 36.0 11 35.178990314848555 36.0 36.0 36.0 36.0 36.0 12 35.08527384081858 36.0 36.0 36.0 36.0 36.0 13 35.12664877069511 36.0 36.0 36.0 36.0 36.0 14 35.09040432841426 36.0 36.0 36.0 36.0 36.0 15 35.06087319359639 36.0 36.0 36.0 36.0 36.0 16 35.06997695777756 36.0 36.0 36.0 36.0 36.0 17 35.04379134966225 36.0 36.0 36.0 36.0 36.0 18 35.054182140191294 36.0 36.0 36.0 36.0 36.0 19 35.03504735941694 36.0 36.0 36.0 36.0 36.0 20 35.030373080007976 36.0 36.0 36.0 36.0 36.0 21 35.01832528941866 36.0 36.0 36.0 36.0 36.0 22 35.00341507063345 36.0 36.0 36.0 36.0 36.0 23 34.96219128290007 36.0 36.0 36.0 32.0 36.0 24 34.94822129806065 36.0 36.0 36.0 32.0 36.0 25 34.924326930655425 36.0 36.0 36.0 32.0 36.0 26 34.88142017979424 36.0 36.0 36.0 32.0 36.0 27 34.86156121488611 36.0 36.0 36.0 32.0 36.0 28 34.84241994334488 36.0 36.0 36.0 32.0 36.0 29 34.817132842816804 36.0 36.0 36.0 32.0 36.0 30 34.811234590223975 36.0 36.0 36.0 32.0 36.0 31 34.797972098974924 36.0 36.0 36.0 32.0 36.0 32 34.76651413364489 36.0 36.0 36.0 32.0 36.0 33 34.73731495519053 36.0 36.0 36.0 32.0 36.0 34 34.71284847304709 36.0 36.0 36.0 32.0 36.0 35 34.68546300031063 36.0 36.0 36.0 32.0 36.0 36 34.65565925328363 36.0 36.0 36.0 32.0 36.0 37 34.63943789958784 36.0 36.0 36.0 32.0 36.0 38 34.59875655451549 36.0 36.0 36.0 32.0 36.0 39 34.57912291194347 36.0 36.0 36.0 32.0 36.0 40 34.56940530666555 36.0 36.0 36.0 32.0 36.0 41 34.54010969396034 36.0 36.0 36.0 32.0 36.0 42 34.51113305608486 36.0 36.0 36.0 32.0 36.0 43 34.502202688104745 36.0 36.0 36.0 32.0 36.0 44 34.45883138378514 36.0 36.0 36.0 32.0 36.0 45 34.41720238674771 36.0 36.0 36.0 32.0 36.0 46 34.406038267707046 36.0 36.0 36.0 32.0 36.0 47 34.37442637847662 36.0 36.0 36.0 32.0 36.0 48 34.32757138684507 36.0 36.0 36.0 32.0 36.0 49 34.31156422845645 36.0 36.0 36.0 32.0 36.0 50 33.776998576667545 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 11.0 21 29.0 22 116.0 23 307.0 24 784.0 25 1679.0 26 3723.0 27 6961.0 28 11761.0 29 18015.0 30 25860.0 31 36922.0 32 53709.0 33 85921.0 34 183912.0 35 648740.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93098107590505 18.314127919647948 11.39461444648993 26.360276557957068 2 16.045693026982217 21.041548051119516 36.7484101652983 26.16434875659997 3 18.80237266667223 24.400875702049888 28.690183773177964 28.10656785809992 4 12.31775945314159 15.906795950859149 36.53323145882381 35.24221313717545 5 14.024414556008363 37.017121715787866 33.75254414880547 15.205919579398305 6 33.60418526977168 35.895995081825845 16.888791217758094 13.611028430644378 7 29.516762405478207 30.773838500447397 21.14107681822607 18.56832227584832 8 27.755472185183606 33.26168756386457 19.91999658770796 19.062843663243868 9 27.285144025480896 14.140784733716288 19.01516521319851 39.55890602760431 10 15.521649025689527 27.1888952251137 32.2793255165955 25.01013023260127 11 37.11578137242629 21.368068208687426 22.547626002012137 18.96852441687414 12 24.348072010422317 24.040316934874426 29.37285283113343 22.23875822356983 13 29.548567163210333 19.827531051365145 25.556096452795895 25.067805332628623 14 22.899240116648354 20.258796148193483 25.66810854416735 31.173855190990817 15 24.73890890208678 27.85716603845316 22.92993217148606 24.473992887974 16 24.9879688999541 26.26896810715329 24.734736266232712 24.0083267266599 17 23.27932088033344 26.275180698313793 26.058389084384604 24.387109336968162 18 24.09474665145973 25.143005503243067 27.463547389552645 23.298700455744562 19 24.891349198622102 25.555169200383883 26.063210796927084 23.490270804066927 20 24.945871640448605 24.94614981617221 26.197569671428106 23.910408871951077 21 25.79430759744264 24.796676727355337 25.14801266626795 24.261003008934075 22 24.940864477423723 25.34496107858001 25.729585379083968 23.984589064912303 23 23.768724703395137 24.99649962214464 26.23716334942116 24.99761232503906 24 24.109768140534378 25.602459073396666 26.17531561353974 24.11245717252922 25 24.253492264396755 25.150238072056787 26.209716678025508 24.386552985520954 26 23.52235373752266 25.9432243348123 26.636067337070163 23.898354590594877 27 24.43588281384017 25.701675081482307 25.83121224344085 24.031229861236678 28 23.6760921874348 25.408663319285456 26.4509877556319 24.464256737647837 29 23.735436341803783 25.59188839589969 26.2211218826933 24.451553379603226 30 23.833632372236206 25.560639989614774 26.584975729168114 24.020751908980902 31 24.170410448280176 25.419512172506035 25.897788966623548 24.512288412590234 32 23.840123139120315 25.71020580367285 25.909008720808934 24.540662336397904 33 23.57186901632428 25.30583102679296 26.46183660885248 24.660463348030284 34 24.063220069451205 25.523178992169353 26.747615802235607 23.665985136143835 35 24.618551539007193 25.369718717980817 26.357149811535947 23.654579931476047 36 23.52967903157758 25.82110519214988 26.29752748144336 24.351688294829177 37 24.45656054262811 25.548956609223378 25.802374693427172 24.192108154721335 38 23.78040808378653 25.539498634620823 26.26766995377647 24.41242332781618 39 24.164105131878475 25.16498138540783 25.957318571474936 24.71359491123876 40 24.587952209410684 25.23035268045491 26.472500011590654 23.709195098543752 41 23.60144836826757 25.242128786087502 27.011233662971566 24.145189182673363 42 24.484192664506168 25.767788178459 26.370502246268966 23.377516910765863 43 23.577432530796372 25.02348266733429 26.59128104556982 24.80780375629952 44 23.107964634593007 25.540518612274038 26.58766476116296 24.763851991969993 45 23.2588286020279 25.670333949956188 26.62419850619636 24.446638941819547 46 23.230105317426613 25.102322398544587 26.681249269788047 24.986323014240757 47 23.55939479977338 25.012216573184 26.97326633613148 24.455122290911145 48 23.751385083290447 25.92440111084839 25.996170447538375 24.328043358322784 49 23.034711694043793 25.687024493372462 26.55678725584285 24.721476556740893 50 22.778254798072055 26.330932983697032 26.129069946423307 24.761742271807606 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 46.5 2 40.0 3 154.5 4 269.0 5 300.0 6 331.0 7 303.5 8 276.0 9 356.5 10 437.0 11 659.0 12 881.0 13 1457.0 14 2033.0 15 2734.0 16 3435.0 17 3793.0 18 4151.0 19 4484.0 20 4817.0 21 5734.5 22 6652.0 23 7081.0 24 7510.0 25 8769.5 26 10029.0 27 12166.5 28 14304.0 29 16450.5 30 18597.0 31 20538.0 32 22479.0 33 26070.5 34 29662.0 35 33778.5 36 37895.0 37 42929.5 38 47964.0 39 50082.0 40 52200.0 41 55173.0 42 58146.0 43 59067.5 44 59989.0 45 64861.5 46 69734.0 47 73662.0 48 77590.0 49 78495.5 50 79401.0 51 75928.0 52 72455.0 53 70499.5 54 68544.0 55 68537.0 56 68530.0 57 66663.0 58 64796.0 59 59073.5 60 53351.0 61 46527.0 62 39703.0 63 34801.0 64 29899.0 65 25493.5 66 21088.0 67 18665.0 68 16242.0 69 14654.0 70 13066.0 71 10216.5 72 7367.0 73 6530.0 74 5693.0 75 4258.5 76 2824.0 77 2484.5 78 2145.0 79 1875.5 80 1606.0 81 1292.0 82 978.0 83 800.5 84 623.0 85 504.5 86 386.0 87 287.5 88 189.0 89 122.0 90 55.0 91 39.0 92 23.0 93 17.0 94 11.0 95 7.0 96 3.0 97 2.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.018545048240306734 2 0.003801734889262881 3 5.56351447209202E-4 4 3.709009648061347E-4 5 0.0 6 5.56351447209202E-4 7 0.0 8 9.272524120153367E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.272524120153367E-5 47 1.8545048240306734E-4 48 0.0 49 0.0 50 9.272524120153367E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1078455.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.48259732894882 #Duplication Level Percentage of deduplicated Percentage of total 1 82.89895145241422 52.626407540456896 2 11.401017484479965 14.475324042150934 3 2.7210122379973347 5.1821077269578 4 1.0306214470669883 2.6170610529092873 5 0.5038430885075149 1.5992633952348247 6 0.28608277103342916 1.0896766413759031 7 0.19132003446117826 0.8501844896061714 8 0.1350549323606467 0.6858910310671484 9 0.10383826383409209 0.5932730421285136 >10 0.5839397771201807 7.14365520640526 >50 0.07401159927917526 3.302785399322178 >100 0.06634389256321717 8.07385038183299 >500 0.003963018882086431 1.7605200505520446 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8545048240306734E-4 2 0.0 0.0 0.0 0.0 1.8545048240306734E-4 3 0.0 0.0 0.0 0.0 1.8545048240306734E-4 4 0.0 0.0 0.0 0.0 1.8545048240306734E-4 5 0.0 0.0 0.0 0.0 2.78175723604601E-4 6 0.0 0.0 0.0 0.0 4.6362620600766836E-4 7 0.0 0.0 0.0 9.272524120153367E-5 4.6362620600766836E-4 8 0.0 0.0 0.0 9.272524120153367E-5 4.6362620600766836E-4 9 0.0 0.0 0.0 1.8545048240306734E-4 4.6362620600766836E-4 10 0.0 0.0 0.0 1.8545048240306734E-4 4.6362620600766836E-4 11 0.0 0.0 0.0 1.8545048240306734E-4 4.6362620600766836E-4 12 0.0 0.0 0.0 1.8545048240306734E-4 4.6362620600766836E-4 13 0.0 0.0 0.0 1.8545048240306734E-4 4.6362620600766836E-4 14 0.0 0.0 0.0 1.8545048240306734E-4 5.56351447209202E-4 15 0.0 0.0 0.0 1.8545048240306734E-4 6.490766884107357E-4 16 0.0 0.0 0.0 2.78175723604601E-4 6.490766884107357E-4 17 0.0 0.0 0.0 2.78175723604601E-4 6.490766884107357E-4 18 0.0 0.0 0.0 3.709009648061347E-4 6.490766884107357E-4 19 0.0 0.0 0.0 4.6362620600766836E-4 6.490766884107357E-4 20 0.0 0.0 0.0 7.418019296122694E-4 6.490766884107357E-4 21 9.272524120153367E-5 0.0 0.0 0.0010199776532168704 7.418019296122694E-4 22 9.272524120153367E-5 0.0 0.0 0.001947230065232207 7.418019296122694E-4 23 9.272524120153367E-5 0.0 0.0 0.0029672077184490775 8.34527170813803E-4 24 9.272524120153367E-5 0.0 0.0 0.005285338748487419 8.34527170813803E-4 25 9.272524120153367E-5 0.0 0.0 0.006768942607711958 8.34527170813803E-4 26 9.272524120153367E-5 0.0 0.0 0.008437996949339565 8.34527170813803E-4 27 9.272524120153367E-5 0.0 0.0 0.012239731838602445 8.34527170813803E-4 28 9.272524120153367E-5 0.0 0.0 0.02420128795360029 8.34527170813803E-4 29 9.272524120153367E-5 0.0 0.0 0.04979345452522358 8.34527170813803E-4 30 9.272524120153367E-5 0.0 0.0 0.09420884506075822 8.34527170813803E-4 31 9.272524120153367E-5 0.0 0.0 0.17831063883054926 8.34527170813803E-4 32 9.272524120153367E-5 0.0 0.0 0.2806793051170424 8.34527170813803E-4 33 9.272524120153367E-5 0.0 0.0 0.3835115976095433 8.34527170813803E-4 34 9.272524120153367E-5 0.0 0.0 0.5074852450959938 8.34527170813803E-4 35 9.272524120153367E-5 0.0 0.0 0.6476858097927127 8.34527170813803E-4 36 9.272524120153367E-5 0.0 0.0 0.844077870657561 8.34527170813803E-4 37 1.8545048240306734E-4 0.0 0.0 1.1331024474827416 8.34527170813803E-4 38 1.8545048240306734E-4 0.0 0.0 1.4889819232142278 8.34527170813803E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTA 55 0.0044834944 19.999853 7 ATACCGT 255 0.0 19.84299 6 TGTAGGA 545 0.0 19.781506 2 TAGGACG 470 0.0 19.65943 4 CGTCGTA 225 0.0 19.555412 10 AGGACGT 455 0.0 19.340517 5 CTGTAGG 560 0.0 19.254322 1 CGCGGGA 195 0.0 19.179346 44 CGCAATA 255 0.0 18.980251 36 GTAGGAC 635 0.0 18.708525 3 GGACGTG 480 0.0 18.333199 6 ACCGTCG 255 0.0 18.117514 8 GACGTGA 280 0.0 18.071295 7 TAGCGTA 220 0.0 17.999866 7 AGCGTAT 225 0.0 17.59987 8 GTCGTAG 250 0.0 17.59987 11 CGAGCCG 300 0.0 17.59987 15 TTAGGAC 365 0.0 17.479322 3 CCGTCGT 240 0.0 17.416538 9 CGTATAT 230 0.0 17.217264 10 >>END_MODULE