##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062687_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 536755 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0243910163855 32.0 32.0 32.0 32.0 32.0 2 31.14232750510009 32.0 32.0 32.0 32.0 32.0 3 31.328140399251055 32.0 32.0 32.0 32.0 32.0 4 31.502445249694926 32.0 32.0 32.0 32.0 32.0 5 31.363234622872632 32.0 32.0 32.0 32.0 32.0 6 34.94655475962031 36.0 36.0 36.0 36.0 36.0 7 34.952335795660964 36.0 36.0 36.0 36.0 36.0 8 34.893211986846886 36.0 36.0 36.0 32.0 36.0 9 35.00020679825992 36.0 36.0 36.0 36.0 36.0 10 34.876696071764584 36.0 36.0 36.0 32.0 36.0 11 35.02694152825777 36.0 36.0 36.0 36.0 36.0 12 34.90703766150292 36.0 36.0 36.0 32.0 36.0 13 34.9683598662332 36.0 36.0 36.0 36.0 36.0 14 34.91805758679472 36.0 36.0 36.0 32.0 36.0 15 34.873441327980174 36.0 36.0 36.0 32.0 36.0 16 34.88865124684446 36.0 36.0 36.0 32.0 36.0 17 34.865016627697926 36.0 36.0 36.0 32.0 36.0 18 34.870723141843115 36.0 36.0 36.0 32.0 36.0 19 34.83746960903951 36.0 36.0 36.0 32.0 36.0 20 34.807204404244025 36.0 36.0 36.0 32.0 36.0 21 34.78557069799071 36.0 36.0 36.0 32.0 36.0 22 34.76593231548844 36.0 36.0 36.0 32.0 36.0 23 34.719065495430876 36.0 36.0 36.0 32.0 36.0 24 34.697450419651425 36.0 36.0 36.0 32.0 36.0 25 34.68623487438403 36.0 36.0 36.0 32.0 36.0 26 34.63098806718149 36.0 36.0 36.0 32.0 36.0 27 34.61061378096152 36.0 36.0 36.0 32.0 36.0 28 34.57566114894132 36.0 36.0 36.0 32.0 36.0 29 34.53075984387663 36.0 36.0 36.0 32.0 36.0 30 34.52818324934095 36.0 36.0 36.0 32.0 36.0 31 34.51473018416223 36.0 36.0 36.0 32.0 36.0 32 34.43925254538849 36.0 36.0 36.0 32.0 36.0 33 34.40015835902786 36.0 36.0 36.0 32.0 36.0 34 34.37215675680711 36.0 36.0 36.0 32.0 36.0 35 34.30043502156477 36.0 36.0 36.0 32.0 36.0 36 34.25711358068393 36.0 36.0 36.0 32.0 36.0 37 34.225648573371465 36.0 36.0 36.0 32.0 36.0 38 34.15369582025319 36.0 36.0 36.0 32.0 36.0 39 34.05659379046306 36.0 36.0 36.0 32.0 36.0 40 34.00372609477322 36.0 36.0 36.0 32.0 36.0 41 33.97891402967834 36.0 36.0 36.0 32.0 36.0 42 33.86130916339857 36.0 36.0 36.0 32.0 36.0 43 33.86589598606441 36.0 36.0 36.0 32.0 36.0 44 33.82482696947397 36.0 36.0 36.0 32.0 36.0 45 33.66514145187283 36.0 36.0 36.0 27.0 36.0 46 33.721791133757485 36.0 36.0 36.0 27.0 36.0 47 33.61686057884882 36.0 36.0 36.0 27.0 36.0 48 33.571312796340976 36.0 36.0 36.0 21.0 36.0 49 33.5821203342307 36.0 36.0 36.0 21.0 36.0 50 32.90670044992594 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 13.0 22 53.0 23 173.0 24 454.0 25 1074.0 26 2373.0 27 4566.0 28 8168.0 29 12442.0 30 17789.0 31 25167.0 32 36636.0 33 55544.0 34 109769.0 35 262530.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.3861963207331 17.493194306508684 11.638527771515028 25.482081601243188 2 16.294195788952006 21.118586405480585 35.37284039863544 27.214377406931966 3 19.071377470414642 25.451791516380005 27.85196887948252 27.62486213372284 4 12.86532166564509 15.32772057165959 34.8955664896144 36.91139127308091 5 14.699816489832418 36.46710324077093 32.553399595718716 16.279680673677934 6 34.491720571139 34.30429695650878 16.684614123468567 14.519368348883654 7 29.73554042347067 30.616389227860008 21.0990116533614 18.549058695307917 8 29.400191893880823 30.671908039981 20.057381859507597 19.870518206630585 9 28.046501662769792 13.807789401123419 18.064852679527903 40.08085625657888 10 16.51256159700422 26.074279699304153 30.803625490214344 26.60953321347728 11 38.143473279242855 21.191977717953257 20.821603897495134 19.842945105308754 12 24.641409954262187 23.479799908710678 28.247524475785042 23.631265661242093 13 30.36972175387281 19.164982161321273 25.36166407392572 25.103632010880194 14 24.717049678158563 18.40877122709616 24.74201451313914 32.13216458160613 15 26.059002710733946 25.394453707930058 23.8028523255489 24.74369125578709 16 26.590157520656536 25.090963288651245 23.534759806615682 24.784119384076533 17 24.169686355972463 24.94844016357556 25.748432711386016 25.133440769065963 18 25.710053935221843 23.163268157725593 27.14664977503703 23.980028132015537 19 25.245223612262578 25.616342651675346 25.348995351696768 23.789438384365305 20 25.353466665424634 22.80928915426964 26.779443135136145 25.057801045169587 21 26.861789829624318 23.92450931989455 24.158880681130125 25.054820169351004 22 25.3326005346946 24.1001946884519 25.0935715549925 25.473633221860997 23 23.98394053152742 23.599221246192396 25.71527046790435 26.701567754375834 24 24.205456865795384 25.522445063390187 25.267207571424578 25.00489049938985 25 25.534368566664494 23.646356345073638 24.946204506711627 25.873070581550238 26 24.064796788106303 24.569496325139028 25.718623953200247 25.647082933554415 27 25.9602611992436 24.72971840038751 25.02836489646114 24.281655503907743 28 24.55496455552347 23.392050376801336 26.205997149537495 25.8469879181377 29 23.94034522268074 25.133813378543284 26.478188372721263 24.447653026054716 30 25.12263509422362 24.311836871570826 26.203202578457585 24.362325455747964 31 24.108205792214324 24.795297668396195 25.230505537908353 25.86599100148112 32 24.34965673351902 24.720962077670443 25.30316438598616 25.62621680282438 33 23.756835055099625 24.27029091484942 25.842330299671172 26.130543730379785 34 24.33978258236998 24.91080660636603 26.252200724725434 24.49721008653855 35 26.196122998388464 24.182355078201414 25.322912688284227 24.298609235125895 36 24.652029324365866 25.52654376764073 24.999860271446003 24.821566636547402 37 26.004042812828942 24.80163202951067 25.337258153161123 23.85706700449926 38 24.405920764594647 24.726923829307598 25.121144656314332 25.746010749783423 39 24.58328287579995 24.60526683496195 25.66366405529525 25.14778623394286 40 25.466181032314555 24.679229816210373 25.099905916106973 24.75468323536809 41 23.558793117902955 25.481458020884762 25.851831841342886 25.1079170198694 42 26.274743598103417 25.385697385212993 24.98290654022785 23.35665247645574 43 25.12393922739425 23.82222801836965 24.807407476409164 26.24642527782694 44 24.480442660059058 24.640478430568884 25.87344319102756 25.0056357183445 45 24.93148643235741 25.030600553325073 24.84839451891459 25.18951849540293 46 24.32031120459504 24.812530158191944 25.779082743831893 25.088075893381127 47 24.935445287785466 24.23344772465599 26.261937498369832 24.569169489188717 48 25.188028057493643 26.651638084414675 23.933824556827606 24.226509301264077 49 23.903456884425857 25.147227319726877 25.95150487652653 24.997810919320735 50 23.978440735310283 26.46822653995413 23.86647117016579 25.686861554569795 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 17.0 2 22.0 3 66.0 4 110.0 5 143.5 6 177.0 7 165.5 8 154.0 9 213.0 10 272.0 11 385.5 12 499.0 13 851.5 14 1204.0 15 1749.0 16 2294.0 17 2697.0 18 3100.0 19 3507.5 20 3915.0 21 4224.0 22 4533.0 23 4564.5 24 4596.0 25 4273.5 26 3951.0 27 4079.5 28 4208.0 29 4703.5 30 5199.0 31 5892.0 32 6585.0 33 7444.5 34 8304.0 35 9570.5 36 10837.0 37 13168.5 38 15500.0 39 17389.5 40 19279.0 41 21760.5 42 24242.0 43 25687.0 44 27132.0 45 32251.0 46 37370.0 47 41211.0 48 45052.0 49 44681.5 50 44311.0 51 41050.5 52 37790.0 53 36971.5 54 36153.0 55 36663.0 56 37173.0 57 36454.5 58 35736.0 59 32876.5 60 30017.0 61 26773.5 62 23530.0 63 20983.5 64 18437.0 65 15844.5 66 13252.0 67 11519.5 68 9787.0 69 8949.0 70 8111.0 71 6384.0 72 4657.0 73 4165.5 74 3674.0 75 2676.0 76 1678.0 77 1556.0 78 1434.0 79 1208.5 80 983.0 81 781.0 82 579.0 83 503.5 84 428.0 85 348.5 86 269.0 87 196.0 88 123.0 89 86.0 90 49.0 91 35.0 92 21.0 93 14.0 94 7.0 95 5.0 96 3.0 97 3.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013413941183594005 2 0.004471313727864669 3 5.589142159830836E-4 4 3.726094773220557E-4 5 0.0 6 5.589142159830836E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.726094773220557E-4 47 1.8630473866102786E-4 48 0.0 49 0.0 50 3.726094773220557E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 536755.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.12118282229623 #Duplication Level Percentage of deduplicated Percentage of total 1 80.18374548879069 45.80190385441683 2 12.06049576787312 13.778195673684207 3 3.3955257967778234 5.818693494467073 4 1.463598163239678 3.344098330431624 5 0.7471244775874396 2.1338316937642348 6 0.41790732572377304 1.4322816453266722 7 0.290928975665628 1.1632745045109791 8 0.21451097712203077 0.9802496593261538 9 0.1497725030506259 0.769966427565695 >10 0.8861030903022984 9.570966215511566 >50 0.104001925776076 4.2606343814390275 >100 0.08136428139361027 8.639520713184 >500 0.004265063137568276 1.551519315946515 >1k 6.561635596258886E-4 0.7548640904254817 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2173 0.40484019711041347 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1855 0.34559529021620666 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 937 0.17456754012538309 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 901 0.16786056953358608 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 844 0.1572411994299075 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 648 0.12072547065234604 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 592 0.11029240528732849 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 584 0.10880196737804025 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 570 0.10619370103678587 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 563 0.10488956786615868 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 553 0.1030265204795484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.8630473866102784E-4 0.0 10 0.0 0.0 0.0 1.8630473866102784E-4 0.0 11 0.0 0.0 0.0 3.7260947732205567E-4 0.0 12 0.0 0.0 0.0 3.7260947732205567E-4 0.0 13 0.0 0.0 0.0 9.315236933051392E-4 0.0 14 0.0 0.0 0.0 9.315236933051392E-4 0.0 15 0.0 0.0 0.0 9.315236933051392E-4 0.0 16 0.0 0.0 0.0 9.315236933051392E-4 0.0 17 0.0 0.0 0.0 0.001117828431966167 0.0 18 0.0 0.0 0.0 0.001117828431966167 0.0 19 0.0 0.0 0.0 0.001117828431966167 0.0 20 0.0 0.0 0.0 0.001117828431966167 0.0 21 0.0 0.0 0.0 0.0016767426479492506 0.0 22 0.0 0.0 0.0 0.0027945710799154176 0.0 23 0.0 0.0 0.0 0.006334361114474947 0.0 24 1.8630473866102784E-4 0.0 0.0 0.01043306536501756 0.0 25 1.8630473866102784E-4 0.0 0.0 0.011923503274305781 0.0 26 1.8630473866102784E-4 0.0 0.0 0.014531769615560172 0.0 27 1.8630473866102784E-4 0.0 0.0 0.018444169127441755 0.0 28 1.8630473866102784E-4 0.0 0.0 0.02775940606049315 0.0 29 3.7260947732205567E-4 0.0 0.0 0.048066622574545186 0.0 30 3.7260947732205567E-4 0.0 0.0 0.0816014755335302 0.0 31 3.7260947732205567E-4 0.0 0.0 0.133953107097279 0.0 32 3.7260947732205567E-4 0.0 0.0 0.2127600115508938 0.0 33 3.7260947732205567E-4 0.0 0.0 0.28355581224208437 0.0 34 3.7260947732205567E-4 0.0 0.0 0.36180380247971605 0.0 35 3.7260947732205567E-4 0.0 0.0 0.4396791832400257 0.0 36 3.7260947732205567E-4 0.0 0.0 0.5659937960522026 0.0 37 3.7260947732205567E-4 0.0 0.0 0.749876573110637 0.0 38 3.7260947732205567E-4 0.0 0.0 0.9576063567176831 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGAC 30 0.005742263 29.333271 23 CGCAATA 190 0.0 25.47363 36 TTAGTGT 45 0.0013972198 24.444391 4 ATACGAA 210 0.0 24.095188 40 CTAGCGG 230 0.0 22.956472 29 AATACGA 225 0.0 22.48884 39 GTGTATA 50 0.002577224 22.002 1 TACGAAT 230 0.0 21.999952 41 TAGCGGC 245 0.0 21.550974 30 TCTAGCG 235 0.0 21.53187 28 CAATACG 225 0.0 21.511065 38 CGAATGC 260 0.0 21.153803 43 GCAATAC 230 0.0 21.043434 37 ATACTGA 85 6.0981984E-6 20.707767 1 GCGCAAT 235 0.0 20.595703 35 AGCGGCG 260 0.0 20.30765 31 GTATAGA 55 0.004478061 20.00182 1 TTTACAC 55 0.0044804765 19.999958 3 TCATATA 55 0.0044804765 19.999958 2 CGCAAAT 125 2.2808308E-8 19.359959 23 >>END_MODULE