SRR4062686_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062686_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	516445
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2844	0.5506878757660544	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2248	0.43528352486712046	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1840	0.3562818886812729	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1682	0.325688117805381	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1374	0.26604962774351576	No Hit
GTACATGGAAGCAGTGGTATCAACG	1086	0.21028376690644693	No Hit
GGTATCAACGCAGAGTACTTTTTTT	940	0.1820135735654329	No Hit
TCCATGTACTCTGCGTTGATACCAC	840	0.1626504274414507	No Hit
GTACATGGGGTGGTATCAACGCAAA	627	0.12140692619736855	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	585	0.11327440482529602	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCAT	65	9.946234E-9	17.543478	10
AACTATA	35	0.002181718	16.269844	2
CCGACCA	70	4.404974E-7	14.932843	9
GACCATA	70	4.4098306E-7	14.931393	11
ATGGGTA	50	0.0014994254	13.297352	5
TATACTG	50	0.0014994254	13.297352	5
ATCCTAT	50	0.0015137375	13.280602	1
CGGTCCA	80	1.985627E-6	13.066237	10
ACTCTAA	75	1.4697172E-5	12.670291	10
CCATTAA	60	4.1343892E-4	12.648192	1
CGAACCT	85	3.9163388E-6	12.297634	16
TCCGACC	85	3.9163388E-6	12.297634	8
GAACACT	85	3.9163388E-6	12.297634	6
CGCCAGT	70	1.08625514E-4	12.216595	18
GCAGTTA	55	0.0030571055	12.094368	15
CTTACAC	55	0.0030794041	12.082641	3
TCTTACA	55	0.0030861208	12.079126	2
GAATATA	55	0.0030973433	12.073275	1
GCGTTAT	55	0.0030973433	12.073275	1
GCCGGTC	80	2.8493032E-5	11.878397	8