##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062686_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 516445 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.111115414032472 32.0 32.0 32.0 32.0 32.0 2 31.35380921492124 32.0 32.0 32.0 32.0 32.0 3 31.445764795864033 32.0 32.0 32.0 32.0 32.0 4 31.564937214998693 32.0 32.0 32.0 32.0 32.0 5 31.486806920388425 32.0 32.0 32.0 32.0 32.0 6 35.065660428506426 36.0 36.0 36.0 36.0 36.0 7 35.07376003253009 36.0 36.0 36.0 36.0 36.0 8 35.01584486247325 36.0 36.0 36.0 36.0 36.0 9 35.10592028192741 36.0 36.0 36.0 36.0 36.0 10 35.007809156831804 36.0 36.0 36.0 36.0 36.0 11 35.142745113226 36.0 36.0 36.0 36.0 36.0 12 35.049503819380575 36.0 36.0 36.0 36.0 36.0 13 35.0829304185344 36.0 36.0 36.0 36.0 36.0 14 35.04715894238496 36.0 36.0 36.0 36.0 36.0 15 35.01679365663333 36.0 36.0 36.0 36.0 36.0 16 35.026419076571564 36.0 36.0 36.0 36.0 36.0 17 35.00274375780577 36.0 36.0 36.0 36.0 36.0 18 35.011042802234506 36.0 36.0 36.0 36.0 36.0 19 34.982735818915856 36.0 36.0 36.0 36.0 36.0 20 34.94783955697122 36.0 36.0 36.0 36.0 36.0 21 34.93744348381725 36.0 36.0 36.0 32.0 36.0 22 34.9320624655094 36.0 36.0 36.0 32.0 36.0 23 34.90655152049105 36.0 36.0 36.0 32.0 36.0 24 34.896436212955884 36.0 36.0 36.0 32.0 36.0 25 34.87388589297989 36.0 36.0 36.0 32.0 36.0 26 34.822596791526685 36.0 36.0 36.0 32.0 36.0 27 34.809135532341294 36.0 36.0 36.0 32.0 36.0 28 34.78328766858039 36.0 36.0 36.0 32.0 36.0 29 34.76074509386285 36.0 36.0 36.0 32.0 36.0 30 34.738917019237284 36.0 36.0 36.0 32.0 36.0 31 34.736221669296825 36.0 36.0 36.0 32.0 36.0 32 34.68357908392956 36.0 36.0 36.0 32.0 36.0 33 34.62569876753575 36.0 36.0 36.0 32.0 36.0 34 34.59461510906292 36.0 36.0 36.0 32.0 36.0 35 34.54422639390448 36.0 36.0 36.0 32.0 36.0 36 34.513655858803936 36.0 36.0 36.0 32.0 36.0 37 34.48767632564939 36.0 36.0 36.0 32.0 36.0 38 34.43952018123905 36.0 36.0 36.0 32.0 36.0 39 34.4143209828733 36.0 36.0 36.0 32.0 36.0 40 34.3888022925965 36.0 36.0 36.0 32.0 36.0 41 34.34578706348208 36.0 36.0 36.0 32.0 36.0 42 34.30449128174346 36.0 36.0 36.0 32.0 36.0 43 34.283768842761575 36.0 36.0 36.0 32.0 36.0 44 34.22249997579607 36.0 36.0 36.0 32.0 36.0 45 34.14996950304486 36.0 36.0 36.0 32.0 36.0 46 34.140723600770656 36.0 36.0 36.0 32.0 36.0 47 34.06582501524848 36.0 36.0 36.0 32.0 36.0 48 33.9986097261083 36.0 36.0 36.0 32.0 36.0 49 33.968110834648414 36.0 36.0 36.0 32.0 36.0 50 33.39762801459981 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 12.0 21 32.0 22 60.0 23 179.0 24 434.0 25 1075.0 26 2179.0 27 4005.0 28 6828.0 29 10235.0 30 14136.0 31 19450.0 32 27611.0 33 43251.0 34 88475.0 35 298480.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.3246320902156 18.463561486783522 11.513412076388123 25.69839434661275 2 15.807787711379492 21.381448369475763 37.03819886179901 25.772565057345737 3 18.87108111091102 25.32932125838189 28.72816062241379 27.071437008293298 4 12.322730053984555 16.15160598244921 36.088327098388206 35.437336865178025 5 13.70504119509338 37.36525670690974 33.524189410295385 15.405512687701497 6 33.02300544300145 35.87540154479778 17.131609877566355 13.969983134634411 7 28.90801537433802 31.192092091122962 21.31456399035715 18.58532854418186 8 27.937534490604033 32.66098035608826 20.283670090716342 19.11781506259137 9 27.64592550997686 14.000522804945348 19.2171480022074 39.136403682870395 10 15.56564590614683 27.335921540531906 32.36511148331381 24.733321070007456 11 36.3177105016023 21.83911161885583 22.52030709949753 19.32287078004434 12 24.239948106768388 24.612495038193806 29.46528671978623 21.682270135251574 13 29.549516405425553 20.156066957759297 25.957846430888093 24.336570205927057 14 23.101588746139473 20.07687169011221 26.52421845501457 30.297321108733748 15 24.567766170647406 27.520258691632215 23.989776258846536 23.92219887887384 16 24.17546883017553 26.56797916525477 25.29582046490914 23.960731539660564 17 22.622157248109673 26.38112480515834 26.80692038842471 24.189797558307273 18 23.469875785417614 25.28691341769211 28.282973017455877 22.960237779434404 19 24.453136345593432 25.576973346629362 27.239880335756954 22.730009972020255 20 24.8132908634995 24.481212907473207 27.347152165283816 23.358344063743477 21 25.745626349369243 24.637279865232504 26.09764834590324 23.51944543949501 22 24.613075932577523 25.230373031010078 26.71184734095596 23.444703695456436 23 23.315551510809478 25.06249455411515 27.174626533319135 24.44732740175624 24 23.459226055049424 25.829662403547328 27.094850371288327 23.61626117011492 25 23.783558752626128 25.158729390351343 27.235233180687196 23.822478676335333 26 22.980181819942107 25.86083706880694 27.661609658337287 23.497371452913672 27 23.89102421361423 25.707480951505 27.011395211493966 23.39009962338681 28 23.153481977751746 25.47686588116837 27.654251662810175 23.71540047826971 29 23.055310826903156 25.879619320547203 27.412599599182876 23.65247025336677 30 23.25804296682125 25.934223392616833 27.482500556690454 23.325233083871467 31 23.30122278267773 25.642227149067182 26.903736119044623 24.152813949210465 32 23.057440772976793 25.85909438565578 27.05767313073028 24.025791710637144 33 23.06460513704267 25.41432291918791 27.41434228233403 24.106729661435388 34 23.32484582094899 25.80836294281095 27.607199217728894 23.259592018511167 35 24.0970480883734 25.60834164335021 27.214320982873296 23.08028928540309 36 23.206536998131455 26.01303139734144 27.052638712738048 23.727792891789058 37 23.66079640620008 26.0138059231864 26.926971894393404 23.39842577622012 38 23.09616706522476 25.899950623977386 27.09775484320692 23.906127467590935 39 23.374996369410102 25.636611836691227 27.0164296294862 23.971962164412474 40 23.751803192982795 25.750273504439004 27.283834677458398 23.214088625119807 41 22.77377068226045 25.953199275818335 27.773141380011424 23.499888661909786 42 23.657117408436523 26.177230876472805 27.231941445846118 22.933710269244546 43 22.846963374609107 25.504167917203187 27.401756237353446 24.24711247083426 44 22.402191908141234 25.96636621518264 27.379488619310866 24.25195325736526 45 22.568134070423763 26.086030458228855 27.15448886135019 24.19134660999719 46 22.394102748797547 25.70055998327021 27.36114661028108 24.544190657651168 47 22.654106439214246 25.799455895593915 27.48153239938425 24.06490526580759 48 22.801653612678987 26.667505736332036 26.607286351886454 23.923554299102516 49 22.16751057711857 26.477940535778256 27.181984528846247 24.172564358256928 50 22.092381570157517 26.944205094443745 26.53196371346416 24.431449621934572 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 102.0 1 85.5 2 69.0 3 210.5 4 352.0 5 369.5 6 387.0 7 343.0 8 299.0 9 389.5 10 480.0 11 709.5 12 939.0 13 1461.0 14 1983.0 15 2552.0 16 3121.0 17 3457.5 18 3794.0 19 3966.5 20 4139.0 21 4459.5 22 4780.0 23 5046.5 24 5313.0 25 5485.5 26 5658.0 27 6433.5 28 7209.0 29 7998.5 30 8788.0 31 10040.5 32 11293.0 33 12834.5 34 14376.0 35 15990.0 36 17604.0 37 19548.5 38 21493.0 39 22841.0 40 24189.0 41 26041.5 42 27894.0 43 28874.0 44 29854.0 45 32108.5 46 34363.0 47 35905.0 48 37447.0 49 37331.5 50 37216.0 51 35434.5 52 33653.0 53 32656.0 54 31659.0 55 31481.5 56 31304.0 57 29859.5 58 28415.0 59 26109.0 60 23803.0 61 21062.5 62 18322.0 63 15824.0 64 13326.0 65 11470.0 66 9614.0 67 8414.5 68 7215.0 69 6465.0 70 5715.0 71 4575.5 72 3436.0 73 3016.5 74 2597.0 75 1976.0 76 1355.0 77 1209.0 78 1063.0 79 923.0 80 783.0 81 608.5 82 434.0 83 374.5 84 315.0 85 243.0 86 171.0 87 128.5 88 86.0 89 55.0 90 24.0 91 15.5 92 7.0 93 6.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015877779821665425 2 0.0030981033798371557 3 7.745258449592889E-4 4 1.9363146123982223E-4 5 0.0 6 3.8726292247964446E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.9363146123982223E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 516445.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.42627848103817 #Duplication Level Percentage of deduplicated Percentage of total 1 85.77630355818286 60.40905841462651 2 9.893236168692644 13.934876109900543 3 2.0462148789615875 4.323218966933777 4 0.743753313381974 2.09519111877735 5 0.3603936184348436 1.2690590667340649 6 0.23394266875215597 0.9885426922881959 7 0.13426452582458248 0.661902562009261 8 0.10057509706089213 0.5666503835094265 9 0.08612807335426795 0.5459111711174661 >10 0.5199381344378745 7.202766724451654 >50 0.06823291847995161 3.363773270614781 >100 0.03646455123582839 4.379714102434903 >500 5.524932005428165E-4 0.2593354166020559 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 679 0.1314757621818393 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 654 0.12663497565084375 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.9363146123982226E-4 0.0 12 0.0 0.0 0.0 1.9363146123982226E-4 0.0 13 0.0 0.0 0.0 1.9363146123982226E-4 0.0 14 0.0 0.0 0.0 1.9363146123982226E-4 0.0 15 0.0 0.0 0.0 1.9363146123982226E-4 0.0 16 0.0 0.0 0.0 1.9363146123982226E-4 0.0 17 0.0 0.0 0.0 1.9363146123982226E-4 0.0 18 0.0 0.0 0.0 1.9363146123982226E-4 1.9363146123982226E-4 19 0.0 0.0 0.0 1.9363146123982226E-4 1.9363146123982226E-4 20 0.0 0.0 0.0 7.74525844959289E-4 1.9363146123982226E-4 21 0.0 0.0 0.0 0.0011617887674389336 1.9363146123982226E-4 22 0.0 0.0 0.0 0.0029044719185973337 1.9363146123982226E-4 23 0.0 0.0 0.0 0.004840786530995556 1.9363146123982226E-4 24 1.9363146123982226E-4 0.0 0.0 0.009681573061991113 1.9363146123982226E-4 25 1.9363146123982226E-4 0.0 0.0 0.0121987820581088 1.9363146123982226E-4 26 1.9363146123982226E-4 0.0 0.0 0.016845937127864537 5.808943837194668E-4 27 1.9363146123982226E-4 0.0 0.0 0.02246124950381938 7.74525844959289E-4 28 1.9363146123982226E-4 0.0 0.0 0.0400817124766432 7.74525844959289E-4 29 1.9363146123982226E-4 0.0 0.0 0.07435448111609175 7.74525844959289E-4 30 1.9363146123982226E-4 0.0 0.0 0.14193186108878972 7.74525844959289E-4 31 1.9363146123982226E-4 0.0 0.0 0.2749566749605476 7.74525844959289E-4 32 1.9363146123982226E-4 0.0 0.0 0.42966821249116555 7.74525844959289E-4 33 1.9363146123982226E-4 0.0 0.0 0.5830243297931048 7.74525844959289E-4 34 1.9363146123982226E-4 0.0 0.0 0.761552537056221 7.74525844959289E-4 35 1.9363146123982226E-4 0.0 0.0 0.9590566275208395 7.74525844959289E-4 36 1.9363146123982226E-4 0.0 0.0 1.2301406732565907 7.74525844959289E-4 37 1.9363146123982226E-4 0.0 0.0 1.6247615912633484 7.74525844959289E-4 38 1.9363146123982226E-4 0.0 0.0 2.114261925277619 7.74525844959289E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACGCT 55 1.5919664E-4 23.999844 29 GTAAACG 60 2.8698213E-4 21.999855 27 TATACAG 115 8.742063E-9 21.04334 5 CTAGAAC 75 5.4651384E-5 20.533197 3 GTATAGT 55 0.0044803657 19.999868 6 ATACGAA 110 1.262215E-7 19.999868 40 GCCGATC 90 1.0001968E-5 19.555426 13 CGAATGC 115 2.0159496E-7 19.130308 43 TCGCACG 70 8.115079E-4 18.85702 18 ATAGTGC 70 8.115079E-4 18.85702 8 CGCTAGA 105 1.7887505E-6 18.857018 37 GTATAGA 95 1.5903292E-5 18.531576 1 CCGCTAG 95 1.5943151E-5 18.526194 36 GCTTAGA 60 0.0073943785 18.33854 1 CGCAATA 120 3.153491E-7 18.333212 36 CAATACG 120 3.153491E-7 18.333212 38 TACGAAT 145 6.2827894E-9 18.206778 41 TTAGAAC 85 1.4288956E-4 18.117527 3 CCGTCGT 85 1.4288956E-4 18.117527 9 TAGGACG 85 1.4288956E-4 18.117527 4 >>END_MODULE