##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062683_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1084073 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249405713452877 32.0 32.0 32.0 32.0 32.0 2 31.331281196008018 32.0 32.0 32.0 32.0 32.0 3 31.443094699342204 32.0 32.0 32.0 32.0 32.0 4 31.57205557190337 32.0 32.0 32.0 32.0 32.0 5 31.482179705610232 32.0 32.0 32.0 32.0 32.0 6 35.08363366673647 36.0 36.0 36.0 36.0 36.0 7 35.10366829540077 36.0 36.0 36.0 36.0 36.0 8 35.036450497337356 36.0 36.0 36.0 36.0 36.0 9 35.19217340529651 36.0 36.0 36.0 36.0 36.0 10 35.045888053664285 36.0 36.0 36.0 36.0 36.0 11 35.19643880070807 36.0 36.0 36.0 36.0 36.0 12 35.09373722987289 36.0 36.0 36.0 36.0 36.0 13 35.14221735990104 36.0 36.0 36.0 36.0 36.0 14 35.10404096403102 36.0 36.0 36.0 36.0 36.0 15 35.05906428810606 36.0 36.0 36.0 36.0 36.0 16 35.06443662004312 36.0 36.0 36.0 36.0 36.0 17 35.04497298613654 36.0 36.0 36.0 36.0 36.0 18 35.05653586059241 36.0 36.0 36.0 36.0 36.0 19 35.04369170710829 36.0 36.0 36.0 36.0 36.0 20 35.02980611084309 36.0 36.0 36.0 36.0 36.0 21 35.01964443353907 36.0 36.0 36.0 36.0 36.0 22 34.99548093163468 36.0 36.0 36.0 36.0 36.0 23 34.95019062369416 36.0 36.0 36.0 32.0 36.0 24 34.92985435482666 36.0 36.0 36.0 32.0 36.0 25 34.906834687331944 36.0 36.0 36.0 32.0 36.0 26 34.85723378407174 36.0 36.0 36.0 32.0 36.0 27 34.83094680893261 36.0 36.0 36.0 32.0 36.0 28 34.815175730785654 36.0 36.0 36.0 32.0 36.0 29 34.79141533826596 36.0 36.0 36.0 32.0 36.0 30 34.77414620602118 36.0 36.0 36.0 32.0 36.0 31 34.77046748696813 36.0 36.0 36.0 32.0 36.0 32 34.73059102108437 36.0 36.0 36.0 32.0 36.0 33 34.70559731678586 36.0 36.0 36.0 32.0 36.0 34 34.69132706007806 36.0 36.0 36.0 32.0 36.0 35 34.65460351839775 36.0 36.0 36.0 32.0 36.0 36 34.61414222104969 36.0 36.0 36.0 32.0 36.0 37 34.608842762433895 36.0 36.0 36.0 32.0 36.0 38 34.56375354796218 36.0 36.0 36.0 32.0 36.0 39 34.52857510518203 36.0 36.0 36.0 32.0 36.0 40 34.49645457455356 36.0 36.0 36.0 32.0 36.0 41 34.47476784312496 36.0 36.0 36.0 32.0 36.0 42 34.415559653270584 36.0 36.0 36.0 32.0 36.0 43 34.417322449687425 36.0 36.0 36.0 32.0 36.0 44 34.40255776133157 36.0 36.0 36.0 32.0 36.0 45 34.31663919311707 36.0 36.0 36.0 32.0 36.0 46 34.36361112212923 36.0 36.0 36.0 32.0 36.0 47 34.31141814250516 36.0 36.0 36.0 32.0 36.0 48 34.285439264698965 36.0 36.0 36.0 32.0 36.0 49 34.293387068952 36.0 36.0 36.0 32.0 36.0 50 33.72319207285856 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 4.0 21 21.0 22 80.0 23 262.0 24 616.0 25 1567.0 26 3468.0 27 6490.0 28 11302.0 29 17593.0 30 26106.0 31 37837.0 32 56762.0 33 91892.0 34 202013.0 35 628057.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.0189277532934 17.991421804926787 11.490150021542359 26.499500420237453 2 16.22389272690877 21.018839762849424 35.97939922714815 26.77786828309366 3 18.802712378478454 24.403288726619294 28.650350946943316 28.14364794795894 4 12.58044906652793 16.042768416459808 36.25721931497107 35.11956320204119 5 14.323574150449279 36.688119711495446 33.73259918843104 15.25570694962424 6 33.87650394302197 35.701667885841005 16.859197817109088 13.562630354027933 7 29.733145277116947 30.608455334649975 21.175234509115164 18.48316487911792 8 28.264978465472346 32.36802318663042 20.083702850269308 19.28329549762793 9 27.522408546287934 14.094899513224663 18.42163765724264 39.96105428324476 10 15.443978403668387 26.76840028300677 32.309909019042074 25.477712294282767 11 37.52044373395518 21.36304473960702 21.86909922117791 19.247412305259886 12 23.894331839276507 23.949863154972036 29.13669097929752 23.019114026453938 13 29.66036420056583 19.65863922448027 25.32338689368705 25.35760968126685 14 23.594721019709926 19.33273866243325 25.157254170152747 31.915286147704077 15 25.45585029790429 26.748844404389743 22.819957696575784 24.97534760113018 16 26.069831090710682 25.908587336830635 23.60864997098904 24.41293160146964 17 24.090536338420016 25.665245790643247 25.552614999174413 24.691602871762324 18 25.043055218606124 24.904226929367304 26.327747301150385 23.724970550876186 19 25.319604860558282 25.93460034517971 25.211217325770498 23.534577468491513 20 25.19479776730903 24.315705676647237 25.872704144462595 24.61679241158114 21 26.296199610173854 24.761432117578796 24.258329466742552 24.684038805504795 22 25.17431944158742 24.99370429851126 24.964185991164804 24.867790268736513 23 24.339043588393032 24.53847665240256 25.119433838865096 26.003045920339314 24 24.17779983451299 25.73276891869828 25.047206230576723 25.042225016212004 25 25.084842072443458 24.579525548556234 25.06381027845911 25.271822100541204 26 24.292828988453728 25.075156377845403 25.586653297333296 25.045361336367574 27 25.518945679857353 25.26305885304772 24.862716809661343 24.355278657433583 28 24.572238216430076 24.420218933595798 25.69753143930344 25.310011410670686 29 24.26755393778832 25.409635697964987 25.718839967419164 24.60397039682752 30 25.002283056583828 24.91787914651504 25.655560096045193 24.42427770085594 31 24.382490847018605 25.112515485580765 24.970735365607297 25.53425830179333 32 24.426860552748757 25.371354143125046 25.047851943549926 25.153933360576268 33 24.331295032714586 24.846112761778958 25.237414823540483 25.585177381965973 34 24.409703036603624 25.124230563808897 25.975095773070635 24.49097062651685 35 25.794941853546767 24.668357204726988 25.169891695485454 24.3668092462408 36 24.64907806024133 25.308258761171988 25.072758015373502 24.96990516321318 37 25.543667262260012 25.076540048502267 25.039734409029652 24.34005828020807 38 24.64234419637792 24.80681651512398 25.18160677371358 25.369232514784525 39 24.64511153769165 25.00126836476879 25.237414823540483 25.116205273999075 40 25.25900008578758 24.998501023455063 25.186587988078298 24.555910902679063 41 24.08712328413308 25.29386858634059 25.70352734548319 24.91548078404314 42 25.488135946564483 25.19489001201949 25.373291282044658 23.94368275937137 43 24.806355291571695 24.172818620148274 25.366649662891703 25.654176425388325 44 24.313030580043964 24.765214150707564 25.890691863001848 25.031063406246627 45 24.708022430223796 24.97710025062888 25.47918820965009 24.83568910949724 46 24.293150540877857 24.849756150658028 25.852458003211964 25.004635305252148 47 24.541243993716293 24.595945107017698 26.203124697322046 24.659686201943963 48 24.722966073317938 25.93312442981238 24.884117582487526 24.45979191438215 49 23.76315986100567 25.049235614206793 26.21825282983711 24.969351694950433 50 23.90586242808372 25.848443785612226 24.988538594725632 25.257155191578427 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 13.0 2 18.0 3 52.5 4 87.0 5 103.5 6 120.0 7 127.0 8 134.0 9 190.0 10 246.0 11 349.0 12 452.0 13 774.0 14 1096.0 15 1504.5 16 1913.0 17 2330.5 18 2748.0 19 3131.5 20 3515.0 21 4287.0 22 5059.0 23 5528.5 24 5998.0 25 7001.5 26 8005.0 27 10074.5 28 12144.0 29 13661.5 30 15179.0 31 16445.5 32 17712.0 33 20127.5 34 22543.0 35 26194.5 36 29846.0 37 35149.0 38 40452.0 39 44248.5 40 48045.0 41 53099.0 42 58153.0 43 59641.0 44 61129.0 45 68062.0 46 74995.0 47 80209.5 48 85424.0 49 85664.5 50 85905.0 51 82030.5 52 78156.0 53 75336.5 54 72517.0 55 72559.5 56 72602.0 57 70390.5 58 68179.0 59 62322.0 60 56465.0 61 49756.0 62 43047.0 63 37860.5 64 32674.0 65 28075.0 66 23476.0 67 20852.5 68 18229.0 69 16090.0 70 13951.0 71 11247.5 72 8544.0 73 7412.0 74 6280.0 75 4700.5 76 3121.0 77 2681.0 78 2241.0 79 1945.0 80 1649.0 81 1261.5 82 874.0 83 722.0 84 570.0 85 460.5 86 351.0 87 250.0 88 149.0 89 96.5 90 44.0 91 31.0 92 18.0 93 10.0 94 2.0 95 2.5 96 3.0 97 3.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014943643094145873 2 0.003320809576476861 3 5.534682627461435E-4 4 1.8448942091538116E-4 5 0.0 6 5.534682627461435E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.8448942091538116E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1084073.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.263247371051555 #Duplication Level Percentage of deduplicated Percentage of total 1 81.87601326264156 49.34114441002067 2 11.443757031272677 13.792759216595918 3 2.975391494569966 5.37920260988978 4 1.1459005950035648 2.7622276407734 5 0.5902608493830966 1.7785517789910281 6 0.3959611474113031 1.431714274546366 7 0.2554561362089765 1.0776231430170213 8 0.19150620698234402 0.9232628739575038 9 0.13878923561752313 0.752750103461216 >10 0.8344937437075987 9.48568409983251 >50 0.07886380369586495 3.329426412253743 >100 0.06930381865466982 7.987804877580162 >500 0.003995340932997575 1.5996535810028185 >1k 3.0733391792289033E-4 0.35819497807797285 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2056 0.18965512470101184 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1812 0.16714741534933533 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.224471045769058E-5 0.0 0.0 0.0 0.0 7 9.224471045769058E-5 0.0 0.0 0.0 0.0 8 9.224471045769058E-5 0.0 0.0 0.0 0.0 9 9.224471045769058E-5 0.0 0.0 0.0 0.0 10 9.224471045769058E-5 0.0 0.0 9.224471045769058E-5 0.0 11 9.224471045769058E-5 0.0 0.0 9.224471045769058E-5 0.0 12 9.224471045769058E-5 0.0 0.0 1.8448942091538116E-4 9.224471045769058E-5 13 9.224471045769058E-5 0.0 0.0 1.8448942091538116E-4 9.224471045769058E-5 14 9.224471045769058E-5 0.0 0.0 1.8448942091538116E-4 1.8448942091538116E-4 15 9.224471045769058E-5 0.0 0.0 1.8448942091538116E-4 2.7673413137307176E-4 16 1.8448942091538116E-4 0.0 0.0 2.7673413137307176E-4 4.612235522884529E-4 17 1.8448942091538116E-4 0.0 0.0 2.7673413137307176E-4 4.612235522884529E-4 18 1.8448942091538116E-4 0.0 0.0 3.6897884183076233E-4 4.612235522884529E-4 19 1.8448942091538116E-4 0.0 0.0 4.612235522884529E-4 4.612235522884529E-4 20 1.8448942091538116E-4 0.0 0.0 7.379576836615247E-4 5.534682627461435E-4 21 1.8448942091538116E-4 0.0 0.0 9.224471045769058E-4 6.45712973203834E-4 22 1.8448942091538116E-4 0.0 0.0 0.0014759153673230493 6.45712973203834E-4 23 1.8448942091538116E-4 0.0 0.0 0.002213873050984574 6.45712973203834E-4 24 1.8448942091538116E-4 0.0 0.0 0.0033208095764768607 6.45712973203834E-4 25 1.8448942091538116E-4 0.0 0.0 0.003874277839223004 6.45712973203834E-4 26 1.8448942091538116E-4 0.0 0.0 0.0048889696542576 6.45712973203834E-4 27 1.8448942091538116E-4 0.0 0.0 0.006826108573869103 6.45712973203834E-4 28 1.8448942091538116E-4 0.0 0.0 0.01282201475361899 6.45712973203834E-4 29 1.8448942091538116E-4 0.0 0.0 0.024352603560830313 6.45712973203834E-4 30 1.8448942091538116E-4 0.0 0.0 0.04455419515106455 6.45712973203834E-4 31 1.8448942091538116E-4 0.0 0.0 0.08947736914395986 6.45712973203834E-4 32 1.8448942091538116E-4 0.0 0.0 0.14528541897086267 6.45712973203834E-4 33 1.8448942091538116E-4 0.0 0.0 0.20607468316248076 6.45712973203834E-4 34 1.8448942091538116E-4 0.0 0.0 0.27645739724169865 7.379576836615247E-4 35 1.8448942091538116E-4 0.0 0.0 0.35006867618693577 7.379576836615247E-4 36 1.8448942091538116E-4 0.0 0.0 0.46177702055119907 7.379576836615247E-4 37 1.8448942091538116E-4 0.0 0.0 0.6376876833940149 7.379576836615247E-4 38 1.8448942091538116E-4 0.0 0.0 0.8555696894950802 7.379576836615247E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 250 0.0 21.999931 36 GTCGCGC 65 4.931815E-4 20.30763 8 ATATAGG 125 2.2873792E-8 19.35994 3 CTAGCGG 290 0.0 18.965458 29 ATACGAA 310 0.0 17.74188 40 GTATAGA 150 9.576979E-9 17.60238 1 TCGTTAG 75 0.0012907813 17.599945 14 CATATAG 125 4.8514994E-7 17.599945 2 GTAGTAC 100 2.4826966E-5 17.599945 3 TCTAGCG 315 0.0 17.460262 28 TACCGTC 230 0.0 17.217337 7 TATTAGG 90 2.2151586E-4 17.111057 2 CGGTCCA 355 0.0 16.732342 10 GATAGTA 80 0.0019882137 16.499949 2 GTACGAA 80 0.0019882137 16.499949 25 ACTACCC 95 3.3459958E-4 16.210474 3 TAGCGGC 340 0.0 16.17642 30 ATGGGTG 455 0.0 15.955993 5 ATACCGT 235 3.6379788E-12 15.914843 6 GTATTAC 125 9.426289E-6 15.842142 1 >>END_MODULE