##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062679_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2083834 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227334327014532 32.0 32.0 32.0 32.0 32.0 2 30.900122082661095 32.0 32.0 32.0 32.0 32.0 3 30.8790095564234 32.0 32.0 32.0 32.0 32.0 4 30.95943198930433 32.0 32.0 32.0 32.0 32.0 5 30.776180348338688 32.0 32.0 32.0 32.0 32.0 6 34.4350015404298 36.0 36.0 36.0 32.0 36.0 7 34.32662102643493 36.0 36.0 36.0 32.0 36.0 8 34.3308243362955 36.0 36.0 36.0 32.0 36.0 9 34.47775878500879 36.0 36.0 36.0 32.0 36.0 10 34.15942296747246 36.0 36.0 36.0 32.0 36.0 11 34.44635273251132 36.0 36.0 36.0 32.0 36.0 12 34.24351651811037 36.0 36.0 36.0 32.0 36.0 13 34.359827126344996 36.0 36.0 36.0 32.0 36.0 14 34.26679572365169 36.0 36.0 36.0 32.0 36.0 15 34.206118625571904 36.0 36.0 36.0 32.0 36.0 16 34.21230769821396 36.0 36.0 36.0 32.0 36.0 17 34.13543209295942 36.0 36.0 36.0 32.0 36.0 18 34.14901666831427 36.0 36.0 36.0 32.0 36.0 19 34.144024907934124 36.0 36.0 36.0 32.0 36.0 20 34.13747304247843 36.0 36.0 36.0 32.0 36.0 21 34.11653519426211 36.0 36.0 36.0 32.0 36.0 22 34.08079338373402 36.0 36.0 36.0 32.0 36.0 23 34.04172693218366 36.0 36.0 36.0 32.0 36.0 24 34.00734223551396 36.0 36.0 36.0 32.0 36.0 25 33.57365269978319 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 9.0 4 89.0 5 184.0 6 379.0 7 68.0 8 304.0 9 383.0 10 247.0 11 72.0 12 149.0 13 113.0 14 257.0 15 357.0 16 532.0 17 829.0 18 1045.0 19 1504.0 20 2313.0 21 3504.0 22 5287.0 23 8000.0 24 11345.0 25 16228.0 26 22895.0 27 29542.0 28 40774.0 29 54172.0 30 70808.0 31 97441.0 32 141313.0 33 204655.0 34 466638.0 35 902396.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.345463236430405 17.7400792641431 10.952283139428296 25.962174359998198 2 16.95173587399335 20.27749796881891 37.06606749423999 25.704698662947756 3 19.24328749872824 23.964258222298156 28.55085414383095 28.241600135142658 4 12.48728718178358 15.534523910657267 36.575767916614474 35.402420990944684 5 14.38510180293839 36.66830849468374 33.90902928598724 15.037560416390628 6 33.46173050517077 36.07021115197373 17.139654129418204 13.328404213437292 7 29.516973586398848 30.53363119305882 21.19859086482406 18.750804355718273 8 27.532385942548483 33.05731655010401 20.005725266918954 19.40457224042855 9 26.991642477292892 14.109798221474593 18.933855052052586 39.96470424917993 10 15.48090056822413 26.8396178143814 32.10877117628208 25.57071044111239 11 37.641037861855445 21.297702074993417 22.326694712485516 18.734565350665626 12 24.050615880362464 24.11519754589671 29.335789102420563 22.498397471320263 13 29.01128985296958 19.53450136402641 25.71403587499964 25.74017290800437 14 22.95096854045307 20.26031146277572 25.286218646637927 31.502501350133283 15 24.85050465937354 27.75965252031825 22.443013533970404 24.946829286337806 16 25.35774372357097 26.103497543619607 24.29251152284054 24.246247209968878 17 23.71324077001356 26.027644074848872 25.45065280875447 24.808462346383102 18 24.455550302135705 25.25927548933684 26.55344265571905 23.7317315528084 19 25.021274510133683 25.25667558330118 25.564249020603718 24.157800885961418 20 25.16574618816198 24.976781840588657 25.12188032257987 24.735591648669487 21 26.600687215211956 24.603140662892155 24.562105717359557 24.234066404536332 22 25.453864752989443 24.919343637675233 25.36802994702368 24.25876166231165 23 24.313864000595878 24.546784784943522 25.7156175139899 25.423733700470695 24 24.327817869564424 25.55762501573719 25.565409517658804 24.549147597039582 25 24.52174439506486 24.9499196840988 25.564337529556873 24.963998391279464 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 154.0 1 154.0 2 497.0 3 840.0 4 840.0 5 840.0 6 1933.0 7 3026.0 8 3026.0 9 3026.0 10 3565.5 11 4105.0 12 4105.0 13 4105.0 14 5411.0 15 6717.0 16 6717.0 17 6717.0 18 10751.0 19 14785.0 20 14785.0 21 14785.0 22 23885.5 23 32986.0 24 32986.0 25 32986.0 26 49611.5 27 66237.0 28 66237.0 29 66237.0 30 83808.0 31 101379.0 32 101379.0 33 101379.0 34 122694.5 35 144010.0 36 144010.0 37 144010.0 38 161787.5 39 179565.0 40 179565.0 41 179565.0 42 202632.5 43 225700.0 44 225700.0 45 225700.0 46 247132.0 47 268564.0 48 268564.0 49 268564.0 50 270997.0 51 273430.0 52 273430.0 53 273430.0 54 251348.5 55 229267.0 56 229267.0 57 229267.0 58 208794.5 59 188322.0 60 188322.0 61 188322.0 62 165980.5 63 143639.0 64 143639.0 65 143639.0 66 119000.5 67 94362.0 68 94362.0 69 94362.0 70 71592.0 71 48822.0 72 48822.0 73 48822.0 74 38085.5 75 27349.0 76 27349.0 77 27349.0 78 22714.5 79 18080.0 80 18080.0 81 18080.0 82 12533.0 83 6986.0 84 6986.0 85 6986.0 86 5171.0 87 3356.0 88 3356.0 89 3356.0 90 2209.5 91 1063.0 92 1063.0 93 1063.0 94 638.0 95 213.0 96 213.0 97 213.0 98 545.0 99 877.0 100 877.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008062062525133959 2 0.003407181186217328 3 0.005278731415266283 4 0.014732459495334083 5 0.03791088925509421 6 0.04674076725881236 7 0.06823960065916959 8 0.0880588377001239 9 0.0958329694207888 10 0.11694789508185392 11 0.1189154222457259 12 0.13187230844683404 13 0.11977921465913312 14 0.12275449963864685 15 0.11186111753623369 16 0.11114129052506101 17 0.12093093787700941 18 0.1271694386405059 19 0.12980880434813905 20 0.11944329538725253 21 0.12865708113026278 22 0.1484283297038056 23 0.13767891300362697 24 0.13321598553435637 25 0.12846512726061673 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2083834.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.99062178707803 #Duplication Level Percentage of deduplicated Percentage of total 1 77.85419741326433 40.476881322495345 2 13.783858758436734 14.332627749527743 3 3.9686450609627855 6.189969731150142 4 1.6220703454764562 3.3732978337480577 5 0.7884388408813824 2.0495712789253075 6 0.44750396685065924 1.3959605693249837 7 0.2909504745229685 1.0588687255786176 8 0.2004696669805117 0.8338034108612216 9 0.15131344787445006 0.7080192215765352 >10 0.7103999717791223 6.736071944525077 >50 0.07623743898060449 2.7841171734324037 >100 0.08515827940159791 9.694690675710152 >500 0.014760060151799426 5.386656936092759 >1k 0.005996274436668517 4.979463427051628 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2955 0.14180592120101698 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2892 0.13878264775409174 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2494 0.1196832377243101 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2485 0.11925134151760648 No Hit GAATAGGACCGCGGTTCTATTTTGT 2462 0.11814760676714171 No Hit GTATCTGATCGTCTTCGAACCTCCG 2434 0.1168039296796194 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2401 0.11522031025503951 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 2297 0.11022950964424229 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2276 0.10922175182860054 No Hit GAACTACGACGGTATCTGATCGTCT 2268 0.10883784408930845 No Hit GAATAACGCCGCCGCATCGCCAGTC 2241 0.10754215546919764 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 2185 0.10485480129415299 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.7988467411511665E-5 2 0.0 0.0 0.0 0.0 4.7988467411511665E-5 3 0.0 0.0 0.0 0.0 4.7988467411511665E-5 4 0.0 0.0 0.0 0.0 4.7988467411511665E-5 5 0.0 0.0 0.0 0.0 4.7988467411511665E-5 6 0.0 0.0 0.0 0.0 4.7988467411511665E-5 7 0.0 0.0 0.0 0.0 4.7988467411511665E-5 8 0.0 0.0 0.0 0.0 4.7988467411511665E-5 9 0.0 0.0 0.0 0.0 4.7988467411511665E-5 10 0.0 0.0 0.0 0.0 4.7988467411511665E-5 11 0.0 0.0 0.0 0.0 4.7988467411511665E-5 12 0.0 0.0 0.0 0.0 4.7988467411511665E-5 13 0.0 0.0 0.0 0.0 9.597693482302333E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 120 0.0 15.042694 7 TCGCGCA 45 6.760192E-4 14.778788 9 GCGTTAT 275 0.0 13.461678 1 TTAGACG 50 0.0015020627 13.297393 4 ACGGTAT 390 0.0 13.154744 9 CAAGACG 460 0.0 13.00832 4 CGCATCG 330 0.0 12.667836 13 AAGACGG 475 0.0 12.599649 5 CGGTTCT 480 0.0 12.4708 12 CGTTATT 290 0.0 12.441352 2 GTATCAA 2685 0.0 12.302751 1 TTATACC 70 1.093242E-4 12.211891 4 ATCGCCA 360 0.0 12.142052 16 GGTTCTA 525 0.0 12.124929 13 CCTATAC 145 9.822543E-11 11.788527 3 GGTATCA 1065 0.0 11.764992 1 CGCAAGA 495 0.0 11.700559 2 CGAACGA 245 0.0 11.635685 16 AGGCCCG 490 0.0 11.633447 10 GATATAC 485 0.0 11.547224 1 >>END_MODULE