##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062679_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2083834 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34382201269391 32.0 32.0 32.0 32.0 32.0 2 31.432559887207905 32.0 32.0 32.0 32.0 32.0 3 31.514429172381295 32.0 32.0 32.0 32.0 32.0 4 31.614489925781037 32.0 32.0 32.0 32.0 32.0 5 31.554367574384525 32.0 32.0 32.0 32.0 32.0 6 35.16398619083862 36.0 36.0 36.0 36.0 36.0 7 35.17402345868241 36.0 36.0 36.0 36.0 36.0 8 35.123231984889394 36.0 36.0 36.0 36.0 36.0 9 35.24432272436288 36.0 36.0 36.0 36.0 36.0 10 35.12427765359429 36.0 36.0 36.0 36.0 36.0 11 35.25157282201941 36.0 36.0 36.0 36.0 36.0 12 35.162414088646216 36.0 36.0 36.0 36.0 36.0 13 35.2164246288332 36.0 36.0 36.0 36.0 36.0 14 35.18052445636265 36.0 36.0 36.0 36.0 36.0 15 35.13446512534108 36.0 36.0 36.0 36.0 36.0 16 35.15369410423287 36.0 36.0 36.0 36.0 36.0 17 35.12435779433486 36.0 36.0 36.0 36.0 36.0 18 35.14094164890294 36.0 36.0 36.0 36.0 36.0 19 35.126723625778254 36.0 36.0 36.0 36.0 36.0 20 35.119442335617904 36.0 36.0 36.0 36.0 36.0 21 35.120760098933026 36.0 36.0 36.0 36.0 36.0 22 35.10170483829326 36.0 36.0 36.0 36.0 36.0 23 35.07101525361425 36.0 36.0 36.0 36.0 36.0 24 35.04367190476785 36.0 36.0 36.0 36.0 36.0 25 35.01909413129837 36.0 36.0 36.0 36.0 36.0 26 34.984431101517686 36.0 36.0 36.0 36.0 36.0 27 34.97329297823147 36.0 36.0 36.0 36.0 36.0 28 34.959717040800754 36.0 36.0 36.0 32.0 36.0 29 34.93518293683662 36.0 36.0 36.0 32.0 36.0 30 34.92504777251931 36.0 36.0 36.0 32.0 36.0 31 34.92742560107955 36.0 36.0 36.0 32.0 36.0 32 34.898354187521655 36.0 36.0 36.0 32.0 36.0 33 34.88332323975902 36.0 36.0 36.0 32.0 36.0 34 34.875857673883814 36.0 36.0 36.0 32.0 36.0 35 34.8542801393969 36.0 36.0 36.0 32.0 36.0 36 34.829447547165465 36.0 36.0 36.0 32.0 36.0 37 34.82956847810334 36.0 36.0 36.0 32.0 36.0 38 34.800812828661016 36.0 36.0 36.0 32.0 36.0 39 34.80049178581403 36.0 36.0 36.0 32.0 36.0 40 34.798830425072246 36.0 36.0 36.0 32.0 36.0 41 34.76550531376299 36.0 36.0 36.0 32.0 36.0 42 34.74692369929659 36.0 36.0 36.0 32.0 36.0 43 34.7439033051577 36.0 36.0 36.0 32.0 36.0 44 34.71327274629361 36.0 36.0 36.0 32.0 36.0 45 34.69105792495947 36.0 36.0 36.0 32.0 36.0 46 34.689027532903296 36.0 36.0 36.0 32.0 36.0 47 34.6703696167737 36.0 36.0 36.0 32.0 36.0 48 34.627308605196 36.0 36.0 36.0 32.0 36.0 49 34.616275096768746 36.0 36.0 36.0 32.0 36.0 50 34.12214312656383 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 12.0 21 39.0 22 106.0 23 357.0 24 900.0 25 2259.0 26 4841.0 27 9303.0 28 16452.0 29 26676.0 30 40623.0 31 60570.0 32 92826.0 33 159660.0 34 364299.0 35 1304909.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.9243463870341 18.319209636111612 11.425123926323833 26.331320050530454 2 16.3761776968971 20.790093524682685 36.71808412614314 26.11564465227707 3 18.676232409151442 24.28582054635106 28.875169460007438 28.162777584490062 4 12.167301475023647 16.088060884016027 36.733401125139224 35.011236515821096 5 14.0968590093352 36.91596207565577 33.82545530280018 15.161723612208847 6 33.71015676475401 36.38063309599712 16.75257447489542 13.15663566435345 7 29.58112746133086 30.644025046164952 21.15679191028835 18.61805558221584 8 27.607237428701136 33.26263032468037 19.776527304958073 19.35360494166042 9 27.25159489671442 13.884647241574905 18.772464601307014 40.09129326040366 10 15.596395874143527 26.96102472653772 32.03393360507603 25.40864579424273 11 37.8478803973829 21.292147071215844 22.235696317460988 18.624276213940266 12 24.099664368658924 24.13800715412072 29.184378410180468 22.57795006703989 13 29.20146230457896 19.544215134218945 25.650363704594515 25.603958856607576 14 23.078805701413838 20.252908820952147 25.25441085998213 31.41387461765189 15 24.95481885793206 27.87218175728009 22.229361839762667 24.94363754502518 16 25.5606732590024 26.08561910401692 24.136807442435433 24.216900194545246 17 23.876853914467276 26.16940696811742 25.241118054509144 24.712621062906162 18 24.65215559396766 25.278741012959767 26.450715364083706 23.618388028988875 19 25.25037982871956 25.28646715621302 25.395592931106798 24.067560083960622 20 25.403511028229698 24.908845906151832 24.962640978120138 24.725002087498332 21 26.79589641017471 24.623794409727452 24.405926767679194 24.174382412418645 22 25.613220630818002 24.970127179036332 25.169135353391876 24.24751683675379 23 24.513085015409096 24.50463904514467 25.489842281103 25.492433658343227 24 24.567311983584105 25.56763158677707 25.31948322179214 24.54557320784669 25 24.71602824409238 24.934231805412523 25.425201815499697 24.924538134995398 26 24.039150911253007 26.09948777109885 26.025057658143595 23.836303659504548 27 25.076181692015776 25.07162278761168 25.254026952242835 24.598168568129708 28 24.210853647651394 25.3293208576115 25.759873387227582 24.699952107509525 29 24.1942016494596 25.053435158462715 25.69350533679746 25.05885785528022 30 24.003207549161782 25.709197565641023 25.92351406110084 24.364080824096355 31 24.739110696917315 25.294001345596627 24.880484721911632 25.08640323557443 32 24.508094214798298 25.34995589859845 24.871462890038266 25.270486996564983 33 24.192330099230553 24.971566833058677 25.578285026542417 25.257818041168346 34 24.948964264907858 25.20387900379781 25.687986663045137 24.159170068249196 35 25.46795953996336 24.94531714138458 25.593833289983753 23.99289002866831 36 23.96937567963667 25.702575157138234 25.258729822049165 25.069319341175927 37 25.129400902375142 25.456346330849772 25.06082538244409 24.353427384331 38 24.27309468988413 25.050123954211323 25.5669597482333 25.109821607671247 39 25.008901860704835 24.87539794436601 25.015764211544685 25.099935983384476 40 25.38589926068967 25.130408660190785 25.508797725730552 23.974894353388994 41 24.039390853590064 25.532024143957727 26.23217588349168 24.19640911896053 42 25.411717056157062 25.74336535443802 25.409605563590958 23.435312025813957 43 24.46879165998827 24.665352422505823 25.809301508661438 25.056554408844466 44 23.992842040200898 25.410277402134717 25.357106180242766 25.239774377421618 45 24.232352481051752 25.53475948660018 25.573342214399037 24.65954581794903 46 24.102505531883857 25.076721746362107 25.524023324370663 25.296749397383373 47 24.377097396960313 24.884767637329862 25.89012651205735 24.848008453652476 48 25.094993171241086 25.420115037954076 24.96811166340505 24.516780127399784 49 24.04308596558075 25.678916842704364 25.422850380596536 24.855146811118352 50 24.070679334342373 25.76908717297059 25.283923767440207 24.876309725246827 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 10.0 2 16.0 3 48.0 4 80.0 5 116.5 6 153.0 7 154.5 8 156.0 9 218.0 10 280.0 11 421.5 12 563.0 13 983.5 14 1404.0 15 1998.5 16 2593.0 17 3174.0 18 3755.0 19 4340.5 20 4926.0 21 6168.0 22 7410.0 23 8504.5 24 9599.0 25 12469.0 26 15339.0 27 20209.5 28 25080.0 29 28830.5 30 32581.0 31 35735.0 32 38889.0 33 44556.5 34 50224.0 35 58247.5 36 66271.0 37 78001.0 38 89731.0 39 95272.5 40 100814.0 41 108060.5 42 115307.0 43 117127.5 44 118948.0 45 128688.5 46 138429.0 47 146127.0 48 153825.0 49 158559.0 50 163293.0 51 154935.5 52 146578.0 53 142178.5 54 137779.0 55 138784.5 56 139790.0 57 135506.5 58 131223.0 59 118959.0 60 106695.0 61 93643.0 62 80591.0 63 70117.0 64 59643.0 65 51166.0 66 42689.0 67 37383.0 68 32077.0 69 29178.0 70 26279.0 71 20026.5 72 13774.0 73 12434.5 74 11095.0 75 7883.0 76 4671.0 77 4295.5 78 3920.0 79 3398.5 80 2877.0 81 2299.5 82 1722.0 83 1488.5 84 1255.0 85 1084.5 86 914.0 87 681.0 88 448.0 89 270.5 90 93.0 91 60.0 92 27.0 93 18.5 94 10.0 95 7.5 96 5.0 97 5.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016220101985090944 2 0.005086777545620236 3 4.31896206703605E-4 4 1.43965402234535E-4 5 4.798846741151167E-5 6 5.278731415266284E-4 7 9.597693482302334E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.399423370575583E-4 47 4.798846741151167E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2083834.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.46271940777992 #Duplication Level Percentage of deduplicated Percentage of total 1 78.10826373192585 42.53988451060751 2 13.834728482613166 15.069538708627636 3 3.947884588576879 6.450375918058839 4 1.5573707437709428 3.3927458332752956 5 0.7268430777425192 1.9792925298288997 6 0.42180977972479256 1.37837446059653 7 0.2690084439775471 1.0255651981870844 8 0.18537381489257648 0.8076769652835303 9 0.12614626278740265 0.6183241663077343 >10 0.6667312798973644 6.545034055968857 >50 0.06425562683506267 2.4720460220023526 >100 0.07402892749663546 8.753250804257682 >500 0.012526854501637255 4.6588311518719925 >1k 0.00502838525769946 4.309059675126005 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2741 0.13153638917495347 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2565 0.12309041891052742 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2483 0.11915536458278347 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2463 0.11819559523455322 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2440 0.11709186048408846 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2386 0.11450048324386684 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2307 0.11070939431835741 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2166 0.10394302041333427 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2160 0.10365508960886521 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2139 0.10264733179322345 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 2139 0.10264733179322345 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2125 0.10197549324946228 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.7988467411511665E-5 0.0 5 0.0 0.0 0.0 4.7988467411511665E-5 0.0 6 0.0 0.0 0.0 4.7988467411511665E-5 4.7988467411511665E-5 7 0.0 0.0 0.0 4.7988467411511665E-5 4.7988467411511665E-5 8 0.0 0.0 0.0 4.7988467411511665E-5 4.7988467411511665E-5 9 0.0 0.0 0.0 4.7988467411511665E-5 4.7988467411511665E-5 10 0.0 0.0 0.0 9.597693482302333E-5 4.7988467411511665E-5 11 0.0 0.0 0.0 9.597693482302333E-5 4.7988467411511665E-5 12 0.0 0.0 0.0 9.597693482302333E-5 4.7988467411511665E-5 13 0.0 0.0 0.0 9.597693482302333E-5 4.7988467411511665E-5 14 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 15 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 16 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 17 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 18 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 19 0.0 0.0 0.0 9.597693482302333E-5 9.597693482302333E-5 20 0.0 0.0 0.0 1.9195386964604666E-4 9.597693482302333E-5 21 0.0 0.0 0.0 1.9195386964604666E-4 9.597693482302333E-5 22 0.0 4.7988467411511665E-5 0.0 1.9195386964604666E-4 9.597693482302333E-5 23 0.0 4.7988467411511665E-5 0.0 5.7586160893814E-4 1.43965402234535E-4 24 0.0 4.7988467411511665E-5 0.0 7.19827011172675E-4 1.43965402234535E-4 25 0.0 4.7988467411511665E-5 0.0 7.19827011172675E-4 1.43965402234535E-4 26 0.0 4.7988467411511665E-5 0.0 0.001007757815641745 1.43965402234535E-4 27 0.0 4.7988467411511665E-5 0.0 0.0011997116852877916 1.43965402234535E-4 28 0.0 4.7988467411511665E-5 0.0 0.002543388772810118 1.43965402234535E-4 29 0.0 4.7988467411511665E-5 0.0 0.0057586160893814 1.43965402234535E-4 30 0.0 4.7988467411511665E-5 0.0 0.014348551756041989 1.43965402234535E-4 31 0.0 4.7988467411511665E-5 0.0 0.03316003098135456 1.43965402234535E-4 32 0.0 4.7988467411511665E-5 0.0 0.059073803383570864 1.43965402234535E-4 33 0.0 4.7988467411511665E-5 0.0 0.086379241340721 1.43965402234535E-4 34 4.7988467411511665E-5 4.7988467411511665E-5 0.0 0.12083496094218638 1.9195386964604666E-4 35 4.7988467411511665E-5 4.7988467411511665E-5 0.0 0.16095331969821014 1.9195386964604666E-4 36 4.7988467411511665E-5 4.7988467411511665E-5 0.0 0.22655355464974658 1.9195386964604666E-4 37 4.7988467411511665E-5 4.7988467411511665E-5 0.0 0.3206109507763094 1.9195386964604666E-4 38 4.7988467411511665E-5 4.7988467411511665E-5 0.0 0.462752791249207 1.9195386964604666E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2900 0.0 22.68647 1 TAGGACG 460 0.0 21.043386 4 CGTCTTA 225 0.0 20.533245 15 AGGACGT 460 0.0 19.13035 5 GATATAC 580 0.0 18.589247 1 GGTATCA 1400 0.0 18.54589 1 CGAGCGT 60 0.007414044 18.333252 28 TCGGTAT 60 0.007414044 18.333252 12 AACGCAG 3930 0.0 16.569902 6 GGACGTG 535 0.0 16.448526 6 TTAGGAC 495 0.0 16.444372 3 GACGTGA 310 0.0 16.32251 7 ATACACT 770 0.0 16.285643 4 ACTGTTC 870 0.0 16.183838 8 ATACCGT 630 0.0 16.063421 6 CGGGATT 195 8.931238E-10 15.794804 44 ACCGTCG 655 0.0 15.786191 8 CGTCGTA 615 0.0 15.739768 10 CCGTCGT 610 0.0 15.50813 9 TCAACGC 4225 0.0 15.41295 4 >>END_MODULE