FastQCFastQC Report
Thu 2 Feb 2017
SRR4062678_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062678_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1174
Sequences flagged as poor quality0
Sequence length25
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGG968.17717206132879No Hit
GGTCACGTGGGCCGCGGCACCGCAT30.2555366269165247No Hit
CCTTCCAAGCTGCCACTTCCTTCAG30.2555366269165247No Hit
ATACAGTGGAATATTATTTATCCTG20.17035775127768313No Hit
TATTTGTCAAGGCACCTTTTTTTTT20.17035775127768313No Hit
CAACAAAATTTGCTTAAAAACAAAA20.17035775127768313No Hit
GGTCCCAGAGGTGGTGTAGCAAGTG20.17035775127768313No Hit
GCTATAATATGCAGAGGCAGAAGTA20.17035775127768313No Hit
GATTTCCTCATCTGGGGCTAAATAT20.17035775127768313No Hit
TTCTTCACCACATCGCCGGCCACCA20.17035775127768313No Hit
CCCCAGGGCAGCTCCAGGTGGAGGG20.17035775127768313No Hit
GCCTCATTGTTCGCGGGCGCTCCAA20.17035775127768313No Hit
ATTTGGGGCAGAAGAGGCAGTCTTA20.17035775127768313No Hit
ACGCACATGTGTTCACACAAACACA20.17035775127768313No Hit
CAGTTTTTCCTGAGAAAGTGGCCAC20.17035775127768313No Hit
TTCAGAGACTGTGTTTCCTCCTAGA20.17035775127768313No Hit
GCCTGCTGGCAGCGCTCTTGACCAA20.17035775127768313No Hit
CGTCCGTTCCACCCAGTTGGCAGGC20.17035775127768313No Hit
TCAAAATATTGCTTCAAATGAAACA20.17035775127768313No Hit
GGCAGAACTTACACAAATGCTTGTG20.17035775127768313No Hit
GTCCCTGCTTATTGCGACCCACTTC20.17035775127768313No Hit
GTCCGTACTACCCAAAGCAATCTAC20.17035775127768313No Hit
CTCTCGGGACTCGAGAATTCCAATC20.17035775127768313No Hit
GGCTTCATTGCATTAAGGGGCATTA20.17035775127768313No Hit
CTCATACAAAGTGAAGTAAGTCAGA20.17035775127768313No Hit
CTTTATGCGGGATCTGCCGACGGAG20.17035775127768313No Hit
CAAGTGGATCGTGATTGAGCTAGCC20.17035775127768313No Hit
CCACCACTCTGCTGATTTCACCCCT20.17035775127768313No Hit
GTGTTCATTTAGTCCAATCAGGATA20.17035775127768313No Hit
CAGCTAATTTTTGTATTTTTAGTAG20.17035775127768313No Hit
GGCCTGCTGCGCACCGCCGTGCGCG20.17035775127768313No Hit
TCTTTACACATTCACAGATGGCCAT20.17035775127768313No Hit
GCTGAGCCTCAATGGCCCACGGCAC20.17035775127768313No Hit
ATCTGGAGCTGAGTCTTTAAGACGT20.17035775127768313No Hit
GGGCAGTGGCTCAGACTGCGGAGGC20.17035775127768313No Hit
CAATAGTGGAGATAAAATGGAACCA20.17035775127768313No Hit
TCTTTAATACATGGCAGATTCTTTG20.17035775127768313No Hit
CCCCCAAACCGAGCGACCACAGATG20.17035775127768313No Hit
ATGTCAGGAAGCGAAGGAGTTCAGA20.17035775127768313No Hit
GCTCGCGCTCGTCATCCCGCAGATG20.17035775127768313No Hit
TATCTACCCAGAACAGAACTAAATA20.17035775127768313No Hit
GGATGGGTCTGCCTTTCTTGTGCCC20.17035775127768313No Hit
GCTCGCCACGAGCGGATTGCTCGAT20.17035775127768313No Hit
GTAAAAGGTTTTGGTGGGCCGGGTG20.17035775127768313No Hit
GCCCCTCAACAGAGGAATGGATACA20.17035775127768313No Hit
CATTAGCGCAGGGAAAGGAGATTCA20.17035775127768313No Hit
ATATTCACATACACACAAAATACAC20.17035775127768313No Hit
CATTTACATTTAAGGTTAATATTGT20.17035775127768313No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)