##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062677_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1055519 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.854092631207966 32.0 32.0 32.0 32.0 32.0 2 30.542045192933525 32.0 32.0 32.0 32.0 32.0 3 30.552472290882495 32.0 32.0 32.0 32.0 32.0 4 30.570869875388315 32.0 32.0 32.0 32.0 32.0 5 30.4421976297916 32.0 32.0 32.0 32.0 32.0 6 34.013710790615804 36.0 36.0 36.0 32.0 36.0 7 33.844115548843746 36.0 36.0 36.0 32.0 36.0 8 33.812022332141815 36.0 36.0 36.0 32.0 36.0 9 33.93972159667424 36.0 36.0 36.0 32.0 36.0 10 33.64385577142619 36.0 36.0 36.0 27.0 36.0 11 34.02299248047643 36.0 36.0 36.0 32.0 36.0 12 33.7780864200455 36.0 36.0 36.0 32.0 36.0 13 33.87688426262341 36.0 36.0 36.0 32.0 36.0 14 33.76374466020981 36.0 36.0 36.0 32.0 36.0 15 33.75637387863222 36.0 36.0 36.0 32.0 36.0 16 33.728276800322874 36.0 36.0 36.0 27.0 36.0 17 33.635718542252675 36.0 36.0 36.0 27.0 36.0 18 33.68092189718991 36.0 36.0 36.0 27.0 36.0 19 33.66514671929165 36.0 36.0 36.0 27.0 36.0 20 33.62734919977755 36.0 36.0 36.0 27.0 36.0 21 33.543789358599895 36.0 36.0 36.0 27.0 36.0 22 33.51286334021462 36.0 36.0 36.0 27.0 36.0 23 33.39909276858114 36.0 36.0 36.0 27.0 36.0 24 33.42538883715026 36.0 36.0 36.0 27.0 36.0 25 32.84962942400848 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 39.0 5 112.0 6 161.0 7 54.0 8 155.0 9 194.0 10 113.0 11 37.0 12 79.0 13 65.0 14 371.0 15 401.0 16 602.0 17 869.0 18 1266.0 19 1878.0 20 2934.0 21 4321.0 22 5925.0 23 8129.0 24 10310.0 25 13135.0 26 16771.0 27 20692.0 28 26235.0 29 33334.0 30 41152.0 31 54786.0 32 75582.0 33 105696.0 34 224772.0 35 405343.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.056700737894104 17.008326416760468 12.590815549213785 24.344157296131648 2 13.716521124532086 21.28038549322156 38.41772313802549 26.58537024422087 3 19.907662251900334 26.682823719791983 27.16308233370252 26.246431694605164 4 12.394348847786537 17.11198074590661 34.4530776228017 36.040592783505154 5 13.112810486381674 37.86983762636721 33.809406923506316 15.2079449637448 6 33.40486253219051 33.459931168943186 18.416620302223503 14.718585996642803 7 28.367145728262106 31.229854764703653 21.75856053998711 18.644438967047137 8 28.374000005689194 33.25248357008281 20.81647514628339 17.557041277944606 9 27.036963631898026 16.59944828135565 18.126299758279334 38.237288328466995 10 16.040364835281576 27.827037117133525 31.96595983624906 24.166638211335844 11 35.611628162858025 22.176998637917496 20.883968782131298 21.327404417093188 12 23.78004356174156 24.51182769585708 29.272978059756994 22.435150682644363 13 31.469828869965077 20.719614981134153 24.282120790753172 23.5284353581476 14 24.561932703681254 20.118986979159256 24.36928079466304 30.949799522496452 15 25.960039152752646 26.502562760117303 25.5894727656943 21.94792532143575 16 25.493100949591597 25.467777242428497 26.56836262789895 22.47075918008096 17 23.583629596184565 26.01513501618221 27.91431585097947 22.486919536653755 18 25.68785495497461 22.999801742202255 29.991566929081575 21.320776373741563 19 23.882518336944436 29.255347405886795 25.0839534186591 21.77818083850967 20 24.032997458888342 23.41493536242854 30.22907946119706 22.322987717486054 21 24.42822749099298 26.777830688934884 23.245125586001606 25.548816234070525 22 23.232190974989564 27.768606019203766 24.55985046870849 24.439352537098184 23 21.667874680287493 26.869322019748175 24.96214679832118 26.50065650164315 24 22.33821330722585 28.83434651609329 25.1105204040588 23.716919772622056 25 25.172456316758048 25.193041036635112 23.872014267013224 25.762488379593616 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 596.0 1 596.0 2 952.0 3 1308.0 4 1308.0 5 1308.0 6 2941.5 7 4575.0 8 4575.0 9 4575.0 10 4287.5 11 4000.0 12 4000.0 13 4000.0 14 3656.0 15 3312.0 16 3312.0 17 3312.0 18 5102.0 19 6892.0 20 6892.0 21 6892.0 22 11213.0 23 15534.0 24 15534.0 25 15534.0 26 23818.0 27 32102.0 28 32102.0 29 32102.0 30 40685.5 31 49269.0 32 49269.0 33 49269.0 34 56861.0 35 64453.0 36 64453.0 37 64453.0 38 71090.5 39 77728.0 40 77728.0 41 77728.0 42 96077.5 43 114427.0 44 114427.0 45 114427.0 46 171473.5 47 228520.0 48 228520.0 49 228520.0 50 187239.5 51 145959.0 52 145959.0 53 145959.0 54 120530.0 55 95101.0 56 95101.0 57 95101.0 58 85714.0 59 76327.0 60 76327.0 61 76327.0 62 67274.5 63 58222.0 64 58222.0 65 58222.0 66 47591.0 67 36960.0 68 36960.0 69 36960.0 70 28020.5 71 19081.0 72 19081.0 73 19081.0 74 14542.5 75 10004.0 76 10004.0 77 10004.0 78 8233.0 79 6462.0 80 6462.0 81 6462.0 82 4442.5 83 2423.0 84 2423.0 85 2423.0 86 1816.5 87 1210.0 88 1210.0 89 1210.0 90 814.0 91 418.0 92 418.0 93 418.0 94 261.0 95 104.0 96 104.0 97 104.0 98 318.0 99 532.0 100 532.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007863430217741225 2 0.0037896049242126385 3 0.004358045662844534 4 0.015063679573745239 5 0.034106444317913744 6 0.04471733810570914 7 0.06432854358850955 8 0.08412922931752058 9 0.0943611626128947 10 0.11700405203506521 11 0.11851989400475027 12 0.13102559025465196 13 0.11681457178885458 14 0.12183579831343631 15 0.11245652612601005 16 0.11094068415632499 17 0.12079365695927785 18 0.12657280446870212 19 0.12913078779254566 20 0.11899359462027685 21 0.1270465050842287 22 0.1476998519211876 23 0.1370889581333922 24 0.13405727419402208 25 0.12685702483801806 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1055519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.82543596196235 #Duplication Level Percentage of deduplicated Percentage of total 1 77.08628911465864 33.783402271397875 2 13.534791860928902 11.863363079192576 3 4.28173101550092 5.629461852785508 4 1.759050062491579 3.083645434704423 5 0.8562020914400438 1.8761714964451934 6 0.5200027662074554 1.3673608758280873 7 0.31524217388368925 0.9670937992834596 8 0.2290950996509999 0.8032154095163424 9 0.1694969172370042 0.6685448662908323 >10 1.003638936168029 8.521399362051183 >50 0.11572978192163796 3.6576429772030745 >100 0.10922560721885 9.38395490215699 >500 0.009318851397396721 2.7446562678018767 >1k 0.008018546551248342 6.471758533047957 >5k 0.0017337397948645062 5.00046397133023 >10k+ 4.3343494871612656E-4 4.177864900964391 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 23364 2.213508236232602 No Hit TCCATGTACTCTGCGTTGATACCAC 20624 1.9539202989240365 No Hit GAGTACATGGAAGCAGTGGTATCAA 9484 0.8985153275308166 No Hit CATGTACTCTGCGTTGATACCACTG 8287 0.7851114001737534 No Hit GCTTCCATGTACTCTGCGTTGATAC 6800 0.6442328371161485 No Hit CCCATGTACTCTGCGTTGATACCAC 6339 0.6005576403645979 No Hit GCGTTGATACCACTGCTTCCATGTA 5615 0.5319657912363491 No Hit CATGGAAGCAGTGGTATCAACGCAG 5466 0.5178495128936571 No Hit GTACATGGGAAGCAGTGGTATCAAC 5424 0.5138704277232338 No Hit GTATCAACGCAGAGTACATGGAAGC 5234 0.4958698043332237 No Hit ACTCTGCGTTGATACCACTGCTTCC 3754 0.35565442213735615 No Hit ACGCAGAGTACATGGAAGCAGTGGT 3596 0.34068548268671617 No Hit GTATCAACGCAGAGTACTTTTTTTT 3463 0.32808504631370916 No Hit CAGTGGTATCAACGCAGAGTACATG 3330 0.31548460994070215 No Hit TATCAACGCAGAGTACATGGAAGCA 3202 0.3033578741832217 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3069 0.2907574378102147 No Hit GTATCAACGCAGAGTACATGGGAAG 2549 0.2414925737954504 No Hit ATACCACTGCTTCCATGTACTCTGC 2314 0.21922864486570112 No Hit TATCAACGCAGAGTACTTTTTTTTT 2314 0.21922864486570112 No Hit GGTATCAACGCAGAGTACATGGAAG 2213 0.20965989243206423 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1871 0.17725877033004617 No Hit GAGTACATGGGAAGCAGTGGTATCA 1850 0.17526922774483453 No Hit AAGCAGTGGTATCAACGCAGAGTAC 1847 0.1749850073755186 No Hit GTACTCTGCGTTGATACCACTGCTT 1754 0.1661741759267242 No Hit GCGTTGATACCACTGCTTCCCATGT 1676 0.15878444632450955 No Hit TATCAACGCAGAGTACATGGGAAGC 1671 0.158310745708983 No Hit GTGGTATCAACGCAGAGTACATGGA 1664 0.15764756484724576 No Hit GCTTCCCATGTACTCTGCGTTGATA 1640 0.15537380189271816 No Hit AAAAAGTACTCTGCGTTGATACCAC 1635 0.15490010127719162 No Hit CCACTGCTTCCATGTACTCTGCGTT 1596 0.15120523647608428 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1467 0.1389837605954985 No Hit ACATGGAAGCAGTGGTATCAACGCA 1441 0.13652051739476032 No Hit GAAGCAGTGGTATCAACGCAGAGTA 1391 0.1317835112394945 No Hit GGTATCAACGCAGAGTACTTTTTTT 1340 0.1269517649611234 No Hit CTGCTTCCATGTACTCTGCGTTGAT 1320 0.12505696249901707 No Hit GGTATCAACGCAGAGTACATGGGAA 1310 0.12410956126796391 No Hit ACGCAGAGTACATGGGAAGCAGTGG 1264 0.11975151560511937 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1262 0.11956203535890873 No Hit GTACATGGGGTGGTATCAACGCAAA 1235 0.11700405203506521 No Hit CTGTAGGACGTGGAATATGGCAAGA 1226 0.11615139092711736 No Hit GATACCACTGCTTCCATGTACTCTG 1218 0.11539346994227484 No Hit TGGAAGCAGTGGTATCAACGCAGAG 1198 0.11349866748016851 No Hit GTCCTACAGTGGACATTTCTAAATT 1191 0.1128354866184313 No Hit GTTGATACCACTGCTTCCATGTACT 1136 0.10762477984763894 No Hit CTTTAGGACGTGAAATATGGCGAGG 1081 0.10241407307684655 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8948024621063191E-4 2 0.0 0.0 0.0 0.0 1.8948024621063191E-4 3 0.0 0.0 0.0 0.0 1.8948024621063191E-4 4 0.0 0.0 0.0 0.0 1.8948024621063191E-4 5 0.0 0.0 0.0 0.0 1.8948024621063191E-4 6 0.0 0.0 0.0 0.0 1.8948024621063191E-4 7 0.0 0.0 0.0 0.0 1.8948024621063191E-4 8 0.0 0.0 0.0 0.0 3.7896049242126383E-4 9 0.0 0.0 0.0 9.474012310531596E-5 3.7896049242126383E-4 10 0.0 0.0 0.0 9.474012310531596E-5 3.7896049242126383E-4 11 0.0 0.0 0.0 9.474012310531596E-5 3.7896049242126383E-4 12 0.0 0.0 0.0 9.474012310531596E-5 7.579209848425277E-4 13 0.0 0.0 0.0 9.474012310531596E-5 0.0010421413541584757 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCT 55 1.12967755E-5 15.542467 4 TCGCGTA 75 5.8258593E-8 15.2028475 9 TCGGCGT 90 2.2791937E-9 14.779844 13 CGGTCGG 90 2.2791937E-9 14.779844 10 GTCGGCG 90 3.6254278E-8 13.7247925 12 AAGTCGT 50 0.0014979463 13.301229 7 CTAATCT 50 0.0015011627 13.297444 4 CCGCCCC 80 2.0019797E-6 13.059989 4 GGTCGGC 95 7.368908E-8 13.001201 11 GCGGTCG 110 2.733941E-9 12.956972 9 CGCCCCT 75 1.4782736E-5 12.666034 5 AGAATTT 160 0.0 12.469311 17 CGGCGTC 110 3.7982318E-8 12.093174 14 GGCGTCC 110 3.7982318E-8 12.093174 15 GCGACGA 55 0.003064109 12.0926 13 GTGTTAC 55 0.0030793855 12.084573 1 CGACGGG 95 1.0363601E-6 12.002247 14 CGCGTAA 95 1.0369549E-6 12.001678 10 AGGACCT 555 0.0 11.981384 5 CGTCCCC 135 3.7107384E-10 11.963501 17 >>END_MODULE