##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062677_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1055519 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.178005322500116 32.0 32.0 32.0 32.0 32.0 2 31.408836790242525 32.0 32.0 32.0 32.0 32.0 3 31.488158905713682 32.0 32.0 32.0 32.0 32.0 4 31.595687998036986 32.0 32.0 32.0 32.0 32.0 5 31.543576193322906 32.0 32.0 32.0 32.0 32.0 6 35.120162687739395 36.0 36.0 36.0 36.0 36.0 7 35.12788116556879 36.0 36.0 36.0 36.0 36.0 8 35.08393216986146 36.0 36.0 36.0 36.0 36.0 9 35.17603946494568 36.0 36.0 36.0 36.0 36.0 10 35.086905114924505 36.0 36.0 36.0 36.0 36.0 11 35.191415786925674 36.0 36.0 36.0 36.0 36.0 12 35.11121353571087 36.0 36.0 36.0 36.0 36.0 13 35.14073929507664 36.0 36.0 36.0 36.0 36.0 14 35.09092683315033 36.0 36.0 36.0 36.0 36.0 15 35.070240327270284 36.0 36.0 36.0 36.0 36.0 16 35.0730872679696 36.0 36.0 36.0 36.0 36.0 17 35.046695511876145 36.0 36.0 36.0 36.0 36.0 18 35.05084418186693 36.0 36.0 36.0 36.0 36.0 19 35.02007637948725 36.0 36.0 36.0 36.0 36.0 20 35.00359728247431 36.0 36.0 36.0 36.0 36.0 21 34.94173008728408 36.0 36.0 36.0 36.0 36.0 22 34.91377985616555 36.0 36.0 36.0 32.0 36.0 23 34.82310313694022 36.0 36.0 36.0 32.0 36.0 24 34.816013733528244 36.0 36.0 36.0 32.0 36.0 25 34.784754229909645 36.0 36.0 36.0 32.0 36.0 26 34.7074339732397 36.0 36.0 36.0 32.0 36.0 27 34.68801035320065 36.0 36.0 36.0 32.0 36.0 28 34.60614351802289 36.0 36.0 36.0 32.0 36.0 29 34.59185860226107 36.0 36.0 36.0 32.0 36.0 30 34.557890478522886 36.0 36.0 36.0 32.0 36.0 31 34.498876855840585 36.0 36.0 36.0 32.0 36.0 32 34.450037374978564 36.0 36.0 36.0 32.0 36.0 33 34.39456324329548 36.0 36.0 36.0 32.0 36.0 34 34.343985281174476 36.0 36.0 36.0 32.0 36.0 35 34.22392112316311 36.0 36.0 36.0 32.0 36.0 36 34.15656563264138 36.0 36.0 36.0 32.0 36.0 37 34.067741082822764 36.0 36.0 36.0 32.0 36.0 38 33.931969012400536 36.0 36.0 36.0 32.0 36.0 39 33.73189018861811 36.0 36.0 36.0 32.0 36.0 40 33.54901332898792 36.0 36.0 36.0 21.0 36.0 41 33.59969834744803 36.0 36.0 36.0 27.0 36.0 42 33.352969487048554 36.0 36.0 36.0 21.0 36.0 43 33.364417883524595 36.0 36.0 36.0 21.0 36.0 44 33.39482851564017 36.0 36.0 36.0 21.0 36.0 45 33.053426797622784 36.0 36.0 36.0 14.0 36.0 46 33.21321643665344 36.0 36.0 36.0 14.0 36.0 47 33.07570872717592 36.0 36.0 36.0 14.0 36.0 48 33.068993547250216 36.0 36.0 36.0 14.0 36.0 49 33.15046152650971 36.0 36.0 36.0 14.0 36.0 50 32.44093000694445 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 17.0 21 42.0 22 194.0 23 532.0 24 1341.0 25 2986.0 26 6025.0 27 10862.0 28 17820.0 29 26169.0 30 37185.0 31 52032.0 32 75559.0 33 102123.0 34 175804.0 35 546822.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.763480381706074 17.503579323590753 13.092980925118939 24.63995936958423 2 13.398081616565861 21.651450725362682 37.9669948610669 26.983472797004566 3 19.555059535088184 26.594960549951114 27.575622067773743 26.27435784718696 4 12.39516975583506 17.25999416399183 34.52387268407111 35.820963396102 5 13.039556843600161 37.82669947201329 33.68968251637346 15.444061168013082 6 33.82108706712054 33.46685374682976 17.97059077098565 14.741468415064057 7 28.250489333199436 31.07838994692653 21.84633516434585 18.824785555528187 8 28.51526121273042 33.15373763996669 20.66471565173152 17.666285495571373 9 27.123149843820908 16.00776490048971 18.35201450660765 38.51707074908173 10 15.951868227857574 27.653789273333786 32.20264154411242 24.19170095469622 11 35.89741160509664 21.74333195328554 21.003980032571654 21.355276409046166 12 23.729463894065383 24.38857093050907 29.524717224417564 22.357247951007988 13 31.783700719740715 20.323082767813748 24.535702341691625 23.357514170753912 14 24.915326014974625 19.732567580498316 24.478763527705325 30.873342876821734 15 25.97973129806285 26.326290668382097 25.677036604741367 22.016941428813695 16 25.630708684542864 25.053741334831493 26.682513531258085 22.633036449367562 17 23.688157200391466 25.66415194799904 28.221661571227045 22.426029280382448 18 25.913034251396706 22.45937780371552 30.35454596269702 21.27304198219075 19 24.159205092471097 28.749174576677444 25.505083281305215 21.58653704954624 20 24.071286258229364 23.04146112007458 30.724221923053967 22.16303069864209 21 24.49875369368055 26.298342332066028 23.672335599832877 25.530568374420547 22 23.261163465555807 27.21087919781643 25.08045804954719 24.447499287080575 23 21.65313935608928 26.06272364590311 25.537863363899653 26.746273634107958 24 22.510347989946176 28.18414448247734 25.601718206872636 23.703789320703844 25 25.57547519277247 24.180332139923582 24.367917583672106 25.876275083631846 26 21.69416182939388 25.087279338410774 27.033430947240173 26.185127884955172 27 25.716069535460758 26.44831594694174 25.90554978167139 21.93006473592612 28 23.935144701327022 23.259458143339913 26.369113204025695 26.436283951307367 29 22.57145536934911 26.34864933743495 28.420710569871314 22.65918472334463 30 25.66187818504451 24.097718752575748 27.635125469082034 22.605277593297703 31 22.523327386811605 24.993202396167195 26.57716251436497 25.90630770265623 32 22.458809362976886 26.47664324375023 26.566172660084753 24.49837473318813 33 21.778291058711403 25.60389722970406 27.332809736252972 25.285001975331568 34 21.6838351559754 27.164267057248615 28.562441794036868 22.589455992739115 35 24.94677973584559 25.7632501167672 26.876162342885344 22.41380780450186 36 23.269311116142866 26.8735096194384 26.979334336947037 22.8778449274717 37 25.21697856694195 26.125820567891246 26.55546702617385 22.101733838992953 38 23.869489796015042 26.511791829422304 24.464268288870215 25.154450085692442 39 23.322081364712524 25.696932030593477 27.205668491045635 23.775318113648357 40 25.777555875356107 25.535873821314443 24.676012464010597 24.010557839318857 41 22.00405677207137 25.81327290176681 27.584913203836216 24.597757122325607 42 26.807381013510888 26.450494969773164 25.76751342230694 20.974610594409008 43 24.856113438033802 23.857836760873084 25.232989647746752 26.053060153346365 44 23.858499941734824 25.143839191904643 28.396646578602564 22.601014287757966 45 25.24473742301181 25.36884698427977 26.151021440637262 23.235394152071162 46 23.106831805017247 24.73636192242868 28.65244491098692 23.504361361567152 47 25.938708824758244 23.718474039785168 28.235398889077317 22.10741824637927 48 23.305880803661516 29.708323582995668 24.414340243993713 22.57145536934911 49 22.681922352889906 24.94933771916943 29.768199340798223 22.60054058714244 50 22.383775185477475 29.806663830778984 23.16054945481796 24.64901152892558 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 55.0 1 60.0 2 65.0 3 250.0 4 435.0 5 458.0 6 481.0 7 426.5 8 372.0 9 468.5 10 565.0 11 882.5 12 1200.0 13 2052.0 14 2904.0 15 3941.0 16 4978.0 17 5441.0 18 5904.0 19 5849.0 20 5794.0 21 6225.5 22 6657.0 23 6915.5 24 7174.0 25 7113.0 26 7052.0 27 8717.5 28 10383.0 29 12386.5 30 14390.0 31 17034.5 32 19679.0 33 23682.0 34 27685.0 35 32400.0 36 37115.0 37 39674.5 38 42234.0 39 42486.0 40 42738.0 41 45157.0 42 47576.0 43 50790.5 44 54005.0 45 74736.0 46 95467.0 47 110646.0 48 125825.0 49 115045.5 50 104266.0 51 85716.5 52 67167.0 53 61068.0 54 54969.0 55 55625.5 56 56282.0 57 54776.0 58 53270.0 59 48753.0 60 44236.0 61 39190.5 62 34145.0 63 29301.5 64 24458.0 65 21066.5 66 17675.0 67 15118.0 68 12561.0 69 11421.5 70 10282.0 71 7887.5 72 5493.0 73 4906.0 74 4319.0 75 3012.5 76 1706.0 77 1543.5 78 1381.0 79 1174.5 80 968.0 81 766.5 82 565.0 83 532.0 84 499.0 85 407.0 86 315.0 87 237.5 88 160.0 89 96.5 90 33.0 91 23.5 92 14.0 93 11.0 94 8.0 95 8.5 96 9.0 97 7.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014400498712008027 2 0.00445278578594985 3 6.631808617372117E-4 4 2.842203693159479E-4 5 0.0 6 0.0 7 9.474012310531596E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1055519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.737735603880225 #Duplication Level Percentage of deduplicated Percentage of total 1 77.06235287918325 37.558445796385506 2 13.649669797037097 13.305079952965269 3 4.202618362997286 6.144783078593209 4 1.7234300283097883 3.359843082062011 5 0.9013921168129734 2.19659053323263 6 0.521275873014734 1.5243483405404366 7 0.33950925807311405 1.1582838718525879 8 0.22307221460619897 0.8697627692839163 9 0.16099374697025054 0.7061823606342655 >10 0.9996029713886764 9.165391482457462 >50 0.1020919462978723 3.5263378571400863 >100 0.09954676506801516 9.153224878830551 >500 0.009954676382131131 3.380006419223669 >1k 0.0037086049266763037 4.1405792118409845 >5k 3.903794659659267E-4 1.0219929344700218 >10k+ 3.903794659659267E-4 2.7891474304874397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 16882 1.599402758263944 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 12437 1.1782829110608146 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 5460 0.5172810721550252 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 5283 0.5005120703653843 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 4469 0.4233936101576571 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 3870 0.36664427641757275 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 3820 0.36190727026230696 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 3544 0.3357589962852398 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 3284 0.3111265642778576 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 2851 0.2701040909732558 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2455 0.23258700222355067 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 2177 0.20624924800027286 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATA 2124 0.2012280214756911 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 2069 0.19601731470489872 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTA 1957 0.18540642091710335 No Hit ATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACT 1653 0.1566054234930873 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1644 0.15575276238513944 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1597 0.1512999765991896 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 1495 0.14163648404244739 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1303 0.1234463804062267 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1117 0.10582471750863792 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 1089 0.10317199406168907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8948024621063191E-4 2 0.0 0.0 0.0 0.0 1.8948024621063191E-4 3 0.0 0.0 0.0 0.0 1.8948024621063191E-4 4 0.0 0.0 0.0 0.0 1.8948024621063191E-4 5 0.0 0.0 0.0 0.0 1.8948024621063191E-4 6 0.0 0.0 0.0 0.0 1.8948024621063191E-4 7 0.0 0.0 0.0 0.0 1.8948024621063191E-4 8 0.0 0.0 0.0 0.0 1.8948024621063191E-4 9 0.0 0.0 0.0 9.474012310531596E-5 2.842203693159479E-4 10 0.0 0.0 0.0 9.474012310531596E-5 2.842203693159479E-4 11 0.0 0.0 0.0 9.474012310531596E-5 2.842203693159479E-4 12 0.0 0.0 0.0 9.474012310531596E-5 4.737006155265798E-4 13 0.0 0.0 0.0 9.474012310531596E-5 7.579209848425277E-4 14 0.0 9.474012310531596E-5 0.0 9.474012310531596E-5 9.474012310531596E-4 15 0.0 9.474012310531596E-5 0.0 9.474012310531596E-5 0.0011368814772637916 16 0.0 9.474012310531596E-5 0.0 9.474012310531596E-5 0.0011368814772637916 17 0.0 9.474012310531596E-5 0.0 9.474012310531596E-5 0.0011368814772637916 18 0.0 9.474012310531596E-5 0.0 1.8948024621063191E-4 0.0012316216003691075 19 0.0 9.474012310531596E-5 0.0 2.842203693159479E-4 0.0013263617234744235 20 0.0 9.474012310531596E-5 0.0 5.684407386318958E-4 0.0016105820927903715 21 0.0 9.474012310531596E-5 0.0 7.579209848425277E-4 0.0016105820927903715 22 0.0 9.474012310531596E-5 0.0 0.0012316216003691075 0.0017053222158956874 23 0.0 9.474012310531596E-5 0.0 0.003221164185580743 0.0017053222158956874 24 0.0 9.474012310531596E-5 0.0 0.005494927140108326 0.0017053222158956874 25 0.0 9.474012310531596E-5 0.0 0.007200249356004013 0.0017053222158956874 26 0.0 9.474012310531596E-5 0.0 0.010705633910900705 0.0017053222158956874 27 0.0 9.474012310531596E-5 0.0 0.014400498712008027 0.0018948024621063193 28 0.0 9.474012310531596E-5 0.0 0.019421725236589773 0.0018948024621063193 29 0.0 9.474012310531596E-5 0.0 0.02861151717780542 0.0018948024621063193 30 0.0 9.474012310531596E-5 0.0 0.04196987453565497 0.0018948024621063193 31 0.0 9.474012310531596E-5 0.0 0.06679178678924776 0.0018948024621063193 32 0.0 9.474012310531596E-5 0.0 0.09919290889126581 0.001989542585211635 33 0.0 9.474012310531596E-5 0.0 0.12827812668459782 0.001989542585211635 34 0.0 9.474012310531596E-5 0.0 0.167311057403988 0.002273762954527583 35 0.0 9.474012310531596E-5 0.0 0.21155469489417056 0.002273762954527583 36 0.0 9.474012310531596E-5 0.0 0.27256733417399404 0.002273762954527583 37 0.0 9.474012310531596E-5 0.0 0.3716655029421545 0.002273762954527583 38 0.0 9.474012310531596E-5 0.0 0.48724845313064 0.002368503077632899 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTATA 605 0.0 26.908829 44 TCGTATA 75 2.064029E-6 23.466438 44 GTATTAC 95 6.840273E-7 20.849806 1 TATGCGT 140 1.8553692E-10 20.428373 39 AATACCG 55 0.004483493 19.999807 5 AAAGTAC 660 0.0 19.999805 3 TGTAGGA 1035 0.0 19.98143 2 GTCCTAA 540 0.0 19.970337 1 CTGTAGG 1050 0.0 19.912115 1 CACACCG 100 1.1232642E-6 19.799809 5 AAAAGTA 660 0.0 19.667408 2 CCGGTCC 300 0.0 19.06648 9 TCTAGCG 280 0.0 18.85696 28 ATACCGT 270 0.0 18.74056 6 GTCCTAC 910 0.0 18.622261 1 GTCCTAT 395 0.0 18.386536 1 CTAGCGG 300 0.0 18.333155 29 CGCAATA 290 0.0 18.20672 36 GTAGGAC 1125 0.0 18.186491 3 AGTACTC 750 0.0 18.186491 5 >>END_MODULE