##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062675_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1455102 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.141303496249748 32.0 32.0 32.0 32.0 32.0 2 30.922250811283334 32.0 32.0 32.0 32.0 32.0 3 30.915063686257046 32.0 32.0 32.0 32.0 32.0 4 30.92214635125235 32.0 32.0 32.0 32.0 32.0 5 30.841605605655136 32.0 32.0 32.0 32.0 32.0 6 34.4088723677103 36.0 36.0 36.0 32.0 36.0 7 34.310515001697475 36.0 36.0 36.0 32.0 36.0 8 34.316764048156074 36.0 36.0 36.0 32.0 36.0 9 34.39274291424244 36.0 36.0 36.0 32.0 36.0 10 34.17731540469328 36.0 36.0 36.0 32.0 36.0 11 34.39040287210106 36.0 36.0 36.0 32.0 36.0 12 34.233132797563336 36.0 36.0 36.0 32.0 36.0 13 34.329732211212686 36.0 36.0 36.0 32.0 36.0 14 34.25615042794251 36.0 36.0 36.0 32.0 36.0 15 34.21987805665857 36.0 36.0 36.0 32.0 36.0 16 34.21458083350858 36.0 36.0 36.0 32.0 36.0 17 34.14571830703277 36.0 36.0 36.0 32.0 36.0 18 34.167923623223665 36.0 36.0 36.0 32.0 36.0 19 34.147243973274726 36.0 36.0 36.0 32.0 36.0 20 34.11766872700333 36.0 36.0 36.0 32.0 36.0 21 34.08089054925359 36.0 36.0 36.0 32.0 36.0 22 34.04858628467283 36.0 36.0 36.0 32.0 36.0 23 34.02485324052884 36.0 36.0 36.0 32.0 36.0 24 33.9924101540648 36.0 36.0 36.0 32.0 36.0 25 33.49160127606174 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 7.0 4 54.0 5 132.0 6 246.0 7 62.0 8 187.0 9 271.0 10 190.0 11 49.0 12 113.0 13 97.0 14 305.0 15 411.0 16 642.0 17 925.0 18 1384.0 19 1738.0 20 2478.0 21 3048.0 22 4233.0 23 5925.0 24 7786.0 25 10561.0 26 14950.0 27 19257.0 28 26514.0 29 35517.0 30 47587.0 31 66674.0 32 99034.0 33 147552.0 34 344871.0 35 612301.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.31661090385244 17.909623003054353 10.990452049936355 25.783314043156846 2 16.491472108499437 20.519996233803813 37.20740676087197 25.78112489682478 3 19.594907582407462 24.642927342879094 27.965892018424416 27.796273056289028 4 12.36026415779084 15.466688844777055 36.37434634143659 35.79870065599551 5 14.228192533368164 37.013759749210266 33.725856847735294 15.032190869686271 6 33.42706826469828 35.69272635267069 17.39158833268246 13.488617049948573 7 29.37726680686427 30.696398828721893 21.442394050633435 18.483940313780398 8 27.79993768171866 32.806241733026006 20.13128109465569 19.26253949059964 9 27.236281013168494 14.333179472751198 19.14215961097808 39.288379903102225 10 15.65089834243728 27.036966448993017 31.971949891254916 25.34018531731479 11 37.19343996091774 21.595698199670416 22.21956933831953 18.991292501092307 12 24.13802832603081 24.289079386794626 29.22056964486141 22.35232264231315 13 29.209329976461067 19.884789281494932 25.818444036035686 25.087436706008308 14 23.169144047748475 20.165872831288077 25.521337221544066 31.143645899419383 15 24.93850808046824 27.44497032219358 23.016520083690935 24.60000151364725 16 25.287262214449214 26.18504908621685 24.464468651764783 24.06322004756915 17 23.41426627087832 26.15705476218983 25.799248882888758 24.629430084043097 18 24.294151932897552 25.20277928214035 27.08994956581458 23.413119219147514 19 24.820804809367697 25.60750197500076 25.83521199258996 23.736481223041583 20 25.01561945234209 24.71836820072166 25.920515565781976 24.34549678115427 21 26.236584741493925 24.857761788499282 24.75639899917148 24.14925447083532 22 25.080494294850702 25.10258806881144 25.530973268598345 24.28594436773951 23 23.762739415678126 24.843073522317248 26.041915421772817 25.35227164023181 24 23.998706232107462 25.72588636864127 25.83386093371504 24.441546465536227 25 24.172375921761414 25.258602418393668 25.81434300672449 24.754678653120433 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 174.0 1 174.0 2 524.5 3 875.0 4 875.0 5 875.0 6 2275.5 7 3676.0 8 3676.0 9 3676.0 10 4066.5 11 4457.0 12 4457.0 13 4457.0 14 4934.0 15 5411.0 16 5411.0 17 5411.0 18 8609.5 19 11808.0 20 11808.0 21 11808.0 22 18696.0 23 25584.0 24 25584.0 25 25584.0 26 37068.0 27 48552.0 28 48552.0 29 48552.0 30 60166.0 31 71780.0 32 71780.0 33 71780.0 34 85991.5 35 100203.0 36 100203.0 37 100203.0 38 111817.0 39 123431.0 40 123431.0 41 123431.0 42 139189.5 43 154948.0 44 154948.0 45 154948.0 46 174666.5 47 194385.0 48 194385.0 49 194385.0 50 191417.0 51 188449.0 52 188449.0 53 188449.0 54 171718.5 55 154988.0 56 154988.0 57 154988.0 58 141144.5 59 127301.0 60 127301.0 61 127301.0 62 112906.5 63 98512.0 64 98512.0 65 98512.0 66 81928.0 67 65344.0 68 65344.0 69 65344.0 70 49722.5 71 34101.0 72 34101.0 73 34101.0 74 27000.0 75 19899.0 76 19899.0 77 19899.0 78 16160.0 79 12421.0 80 12421.0 81 12421.0 82 8719.5 83 5018.0 84 5018.0 85 5018.0 86 3650.0 87 2282.0 88 2282.0 89 2282.0 90 1504.5 91 727.0 92 727.0 93 727.0 94 444.0 95 161.0 96 161.0 97 161.0 98 388.0 99 615.0 100 615.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008934081597028937 2 0.003642356343404105 3 0.005223001549032301 4 0.01470687278280148 5 0.03415568118248755 6 0.044395513166774564 7 0.0662496512271992 8 0.0876227233554761 9 0.09655680495250504 10 0.11703646892107908 11 0.1207475489690757 12 0.1340799476600266 13 0.12129733860581594 14 0.1250771423584051 15 0.11401262591900774 16 0.11263815182715714 17 0.12370266826655452 18 0.13201823652225067 19 0.1331865395003237 20 0.1227405364022591 21 0.1309873809533627 22 0.15146704492193674 23 0.13971529143661404 24 0.136210382502395 25 0.1309873809533627 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1455102.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.70654457105928 #Duplication Level Percentage of deduplicated Percentage of total 1 78.29891483296791 42.83463074175333 2 13.855242363633389 15.159448678178775 3 4.022920525467068 6.602402430968802 4 1.5119140459858136 3.308463725773339 5 0.6877714524672793 1.88127998095517 6 0.3827160234110052 1.2562242715675633 7 0.21896888800094377 0.8385321861769244 8 0.14593339230223312 0.6386809304310398 9 0.1127118490935748 0.5549468216511743 >10 0.580116699687131 6.047807530777397 >50 0.07909659363133434 3.058525135291292 >100 0.08949053840150085 10.720088666927255 >500 0.010180764522381829 3.755316936245672 >1k 0.0040220304285952906 3.3436519633022894 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3544 0.24355680907592733 No Hit GTACATGGAAGCAGTGGTATCAACG 2664 0.18307994903450067 No Hit TCCATGTACTCTGCGTTGATACCAC 2435 0.16734222068281124 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2093 0.1438387137121659 No Hit TATCAACGCAGAGTACTTTTTTTTT 2051 0.1409523181192796 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1795 0.12335904974359185 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1754 0.12054137785529812 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1597 0.10975175623427086 No Hit GAATAGGACCGCGGTTCTATTTTGT 1536 0.10555961025412652 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1504 0.10336045170716555 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1486 0.1021234250245 No Hit GTATCTGATCGTCTTCGAACCTCCG 1472 0.10116129316020459 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.872370459253029E-5 2 0.0 0.0 0.0 0.0 6.872370459253029E-5 3 0.0 0.0 0.0 0.0 6.872370459253029E-5 4 0.0 0.0 0.0 6.872370459253029E-5 6.872370459253029E-5 5 0.0 6.872370459253029E-5 0.0 6.872370459253029E-5 6.872370459253029E-5 6 0.0 6.872370459253029E-5 0.0 6.872370459253029E-5 6.872370459253029E-5 7 0.0 6.872370459253029E-5 0.0 6.872370459253029E-5 6.872370459253029E-5 8 0.0 6.872370459253029E-5 0.0 1.3744740918506058E-4 6.872370459253029E-5 9 0.0 6.872370459253029E-5 0.0 1.3744740918506058E-4 6.872370459253029E-5 10 6.872370459253029E-5 6.872370459253029E-5 0.0 1.3744740918506058E-4 6.872370459253029E-5 11 6.872370459253029E-5 6.872370459253029E-5 0.0 1.3744740918506058E-4 6.872370459253029E-5 12 6.872370459253029E-5 1.3744740918506058E-4 0.0 1.3744740918506058E-4 2.0617111377759084E-4 13 6.872370459253029E-5 1.3744740918506058E-4 0.0 1.3744740918506058E-4 2.0617111377759084E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 155 0.0 12.8595085 1 AACGCCA 165 0.0 12.6697645 15 CAAGACG 310 0.0 12.561968 4 CGACCAT 190 0.0 12.500475 10 GTCGTAG 240 0.0 12.2713 11 ACAGCGT 70 1.09041925E-4 12.21475 8 GCATTAT 70 1.0999151E-4 12.20341 1 ATACCGT 250 0.0 12.159626 6 TTTACGA 55 0.003067406 12.09137 10 GTTTACG 55 0.003067406 12.09137 9 TAATACG 55 0.0030729452 12.088457 4 ATACGCG 55 0.0030729452 12.088457 4 ACCGTCG 245 0.0 12.020865 8 AACCGCG 175 0.0 11.943311 7 AAGACGG 350 0.0 11.940845 5 TCGCGTA 145 9.640644E-11 11.793551 9 CGTCGTA 250 0.0 11.780448 10 CCGACCA 235 0.0 11.72385 9 CCGTCGT 255 0.0 11.5494585 9 GCTCGTA 100 1.9282215E-6 11.400434 9 >>END_MODULE