##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062675_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1455102 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2184059949062 32.0 32.0 32.0 32.0 32.0 2 31.29332582870479 32.0 32.0 32.0 32.0 32.0 3 31.42455168091309 32.0 32.0 32.0 32.0 32.0 4 31.55509579397183 32.0 32.0 32.0 32.0 32.0 5 31.46100960619943 32.0 32.0 32.0 32.0 32.0 6 35.04194413862396 36.0 36.0 36.0 36.0 36.0 7 35.05351927218848 36.0 36.0 36.0 36.0 36.0 8 34.995734319655945 36.0 36.0 36.0 36.0 36.0 9 35.13247250020961 36.0 36.0 36.0 36.0 36.0 10 34.99342726489277 36.0 36.0 36.0 36.0 36.0 11 35.14531696059795 36.0 36.0 36.0 36.0 36.0 12 35.03852857050571 36.0 36.0 36.0 36.0 36.0 13 35.09510329860037 36.0 36.0 36.0 36.0 36.0 14 35.050645246862416 36.0 36.0 36.0 36.0 36.0 15 35.00768331017345 36.0 36.0 36.0 36.0 36.0 16 35.01841176769739 36.0 36.0 36.0 36.0 36.0 17 34.995418190614814 36.0 36.0 36.0 36.0 36.0 18 35.011233576752694 36.0 36.0 36.0 36.0 36.0 19 34.99335373052886 36.0 36.0 36.0 36.0 36.0 20 34.97537973282973 36.0 36.0 36.0 36.0 36.0 21 34.96674734829586 36.0 36.0 36.0 32.0 36.0 22 34.958683996036015 36.0 36.0 36.0 32.0 36.0 23 34.914606673621506 36.0 36.0 36.0 32.0 36.0 24 34.8937105440031 36.0 36.0 36.0 32.0 36.0 25 34.86267079558684 36.0 36.0 36.0 32.0 36.0 26 34.81733514214124 36.0 36.0 36.0 32.0 36.0 27 34.80609881644036 36.0 36.0 36.0 32.0 36.0 28 34.781252448281975 36.0 36.0 36.0 32.0 36.0 29 34.7567084644238 36.0 36.0 36.0 32.0 36.0 30 34.74122913720138 36.0 36.0 36.0 32.0 36.0 31 34.74522473338639 36.0 36.0 36.0 32.0 36.0 32 34.6971717446612 36.0 36.0 36.0 32.0 36.0 33 34.67574575528039 36.0 36.0 36.0 32.0 36.0 34 34.65238038295597 36.0 36.0 36.0 32.0 36.0 35 34.628375880178844 36.0 36.0 36.0 32.0 36.0 36 34.59991808134413 36.0 36.0 36.0 32.0 36.0 37 34.59002530406803 36.0 36.0 36.0 32.0 36.0 38 34.545468290195465 36.0 36.0 36.0 32.0 36.0 39 34.51731287566095 36.0 36.0 36.0 32.0 36.0 40 34.497358260795465 36.0 36.0 36.0 32.0 36.0 41 34.46321288816866 36.0 36.0 36.0 32.0 36.0 42 34.43480388316421 36.0 36.0 36.0 32.0 36.0 43 34.42633437381022 36.0 36.0 36.0 32.0 36.0 44 34.39386379786434 36.0 36.0 36.0 32.0 36.0 45 34.32818936404458 36.0 36.0 36.0 32.0 36.0 46 34.34445282873641 36.0 36.0 36.0 32.0 36.0 47 34.29665068153298 36.0 36.0 36.0 32.0 36.0 48 34.2597103158404 36.0 36.0 36.0 32.0 36.0 49 34.24213903905019 36.0 36.0 36.0 32.0 36.0 50 33.68500764894832 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 28.0 22 117.0 23 406.0 24 1086.0 25 2375.0 26 4912.0 27 9076.0 28 15487.0 29 23851.0 30 35803.0 31 51965.0 32 78083.0 33 129005.0 34 276457.0 35 826445.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.12672402771916 18.307858115938245 11.507425364875955 26.057992491466635 2 15.999197277340679 21.120952710838406 36.95919309878437 25.920656913036545 3 18.82022742173358 25.02628696152963 28.482146170625406 27.671339446111386 4 12.190502370971066 16.057453096007144 36.683801800563536 35.06824273245825 5 14.162237423905676 37.117810297834794 33.52033053352961 15.199621744729921 6 33.55015796241202 36.09095776008819 16.995339816767725 13.363544460732063 7 29.486317797652674 30.67860534862848 21.39891224120371 18.436164612515135 8 27.7711115784323 32.96531789524033 19.921283868759716 19.342286657567648 9 27.434571597042684 14.061144854450067 18.889466168007466 39.61481738049979 10 15.695188378546659 26.925466393421218 31.963738624508796 25.415606603523326 11 37.45826753038619 21.514230617509973 22.22194732740385 18.805554524699986 12 24.30503153730804 24.174868840809786 29.09919716968295 22.420902452199226 13 29.502811486754883 19.816892561483662 25.56377491062482 25.116521041136636 14 23.218853386223095 20.10938064822947 25.427839422940796 31.243926542606637 15 24.97027699776373 27.411342984890407 22.831320416025818 24.787059601320045 16 25.357672520551823 26.1629081672625 24.381864639042487 24.097554673143186 17 23.569962792986335 26.062640282262002 25.665142374898803 24.70225454985286 18 24.609889890880503 24.93900771217413 26.993296689854045 23.457805707091325 19 25.044223703905296 25.560819791327344 25.774756683723894 23.62019982104347 20 25.15631206609571 24.682118504407253 25.849115732093008 24.31245369740403 21 26.49566834489953 24.77303996558317 24.60171177003399 24.12957991948331 22 25.285924972957226 25.02697405405257 25.454023154390555 24.233077818599657 23 23.98216757313233 24.67744529249496 25.962509844670684 25.377877289702027 24 24.143668278924775 25.60280997483338 25.663699177102362 24.589822569139482 25 24.452443883659015 25.05253927216099 25.744380806293993 24.750636037886004 26 23.821491551794992 25.921413069324352 26.260770722602267 23.996324656278393 27 24.97955469788372 25.322348536391264 25.483093281433188 24.215003484291824 28 23.962168975095903 25.195278406599677 26.131707605377493 24.71084501292693 29 23.807609363467304 25.386467752776092 26.155073664938953 24.65084921881765 30 23.986565890226252 25.648717409501188 26.354647303075662 24.010069397196897 31 24.399320460008987 25.36055891614471 25.37773984229284 24.86238078155346 32 24.032542048598653 25.553947420868088 25.394302255099642 25.019208275433613 33 23.80149295375857 25.04951542915892 25.98587590423214 25.16311571285037 34 24.40076365780543 25.476701976906085 26.24358979645413 23.878944568834353 35 25.21995021654839 25.139199863652166 25.870901146448837 23.769948773350595 36 23.789191410636505 25.97419287445141 25.666104506763098 24.570511208148982 37 25.007937587880434 25.53168094058011 25.39230926766646 24.068072203872994 38 23.889459295637007 25.335474763968435 25.92965991387545 24.845406026519104 39 24.605285402672802 25.177891309337763 25.528794544987228 24.688028743002207 40 24.954126927184486 25.258023148892654 25.845816994272568 23.942032929650292 41 23.68315073445023 25.60384083040227 26.5741508155442 24.1388576196033 42 25.190948813210344 25.84677912613686 25.77510030224685 23.18717175840594 43 24.078655654380242 24.789808549503746 26.062640282262002 25.068895513854013 44 23.63854905016968 25.442133953496043 26.03095865444484 24.888358341889436 45 23.94979870826925 25.744586977407767 25.857431300348704 24.44818301397428 46 23.628119285190515 25.246357469344055 26.061352442201606 25.06417080326383 47 24.067728585350032 25.028348528144416 26.47745656318251 24.426466323323037 48 24.602055388556956 25.90650002542777 25.314376586658533 24.177067999356748 49 23.499108653551435 25.8464355076139 25.936738455448484 24.71771738338618 50 23.518901080474084 26.248744074298568 25.436498609719454 24.795856235507888 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 17.5 2 19.0 3 90.5 4 162.0 5 186.5 6 211.0 7 209.0 8 207.0 9 283.5 10 360.0 11 574.0 12 788.0 13 1306.5 14 1825.0 15 2619.5 16 3414.0 17 4152.5 18 4891.0 19 5627.0 20 6363.0 21 7430.0 22 8497.0 23 9283.0 24 10069.0 25 11417.5 26 12766.0 27 15615.5 28 18465.0 29 21342.5 30 24220.0 31 26458.5 32 28697.0 33 32945.5 34 37194.0 35 42229.5 36 47265.0 37 54477.0 38 61689.0 39 65114.5 40 68540.0 41 73768.5 42 78997.0 43 80332.0 44 81667.0 45 89066.5 46 96466.0 47 102624.0 48 108782.0 49 110386.5 50 111991.0 51 104404.0 52 96817.0 53 93582.0 54 90347.0 55 91697.0 56 93047.0 57 90175.5 58 87304.0 59 79652.0 60 72000.0 61 63480.5 62 54961.0 63 48056.5 64 41152.0 65 35980.0 66 30808.0 67 27254.0 68 23700.0 69 21530.5 70 19361.0 71 14928.5 72 10496.0 73 9510.5 74 8525.0 75 6249.0 76 3973.0 77 3630.5 78 3288.0 79 2766.5 80 2245.0 81 1830.5 82 1416.0 83 1207.0 84 998.0 85 823.5 86 649.0 87 481.5 88 314.0 89 195.5 90 77.0 91 56.5 92 36.0 93 26.5 94 17.0 95 10.0 96 3.0 97 3.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015394109828726783 2 0.003711080047996635 3 5.497896367402422E-4 4 1.3744740918506055E-4 5 0.0 6 6.185133413327726E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.872370459253028E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1455102.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.44514731233657 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2064128091156 46.29230464710505 2 13.506069407367693 15.787284322484943 3 3.8344945490735345 6.723227963668631 4 1.3838221815728686 3.2351076502442115 5 0.643662985824155 1.8809489012995575 6 0.3441526138954391 1.2068430130226782 7 0.20249301439534267 0.8284313839238425 8 0.1411059811567241 0.6597567884285224 9 0.09512986766608496 0.5003891216592677 >10 0.48828464881951517 5.490147598866246 >50 0.07001638766504392 2.885786318451185 >100 0.07384071240030761 9.33968354133214 >500 0.007797522574702977 3.092317256203272 >1k 0.0027173184730025527 2.0777714933103932 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1703 0.11703646892107908 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1673 0.11497475778330317 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1579 0.10851472955160531 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1557 0.10700280805056965 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1545 0.10617812359545928 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1509 0.10370407023012819 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1486 0.1021234250245 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.872370459253029E-5 2 0.0 0.0 0.0 0.0 6.872370459253029E-5 3 0.0 0.0 0.0 0.0 6.872370459253029E-5 4 0.0 0.0 0.0 0.0 6.872370459253029E-5 5 0.0 0.0 0.0 0.0 6.872370459253029E-5 6 0.0 0.0 0.0 0.0 6.872370459253029E-5 7 0.0 0.0 0.0 0.0 6.872370459253029E-5 8 0.0 0.0 0.0 6.872370459253029E-5 6.872370459253029E-5 9 0.0 0.0 0.0 6.872370459253029E-5 6.872370459253029E-5 10 0.0 0.0 0.0 6.872370459253029E-5 6.872370459253029E-5 11 0.0 0.0 0.0 6.872370459253029E-5 6.872370459253029E-5 12 0.0 0.0 0.0 2.0617111377759084E-4 6.872370459253029E-5 13 0.0 0.0 0.0 2.0617111377759084E-4 1.3744740918506058E-4 14 0.0 0.0 0.0 2.0617111377759084E-4 1.3744740918506058E-4 15 0.0 0.0 0.0 2.0617111377759084E-4 1.3744740918506058E-4 16 0.0 0.0 0.0 2.0617111377759084E-4 1.3744740918506058E-4 17 0.0 0.0 0.0 2.7489481837012116E-4 1.3744740918506058E-4 18 0.0 6.872370459253029E-5 0.0 2.7489481837012116E-4 1.3744740918506058E-4 19 0.0 6.872370459253029E-5 0.0 2.7489481837012116E-4 1.3744740918506058E-4 20 0.0 6.872370459253029E-5 0.0 4.123422275551817E-4 2.0617111377759084E-4 21 0.0 6.872370459253029E-5 0.0 4.8106593214771197E-4 2.0617111377759084E-4 22 0.0 6.872370459253029E-5 0.0 0.0010308555688879543 2.0617111377759084E-4 23 0.0 6.872370459253029E-5 0.0 0.0019929874331833784 2.7489481837012116E-4 24 0.0 6.872370459253029E-5 0.0 0.002955119297478802 2.7489481837012116E-4 25 0.0 6.872370459253029E-5 0.0 0.003642356343404105 2.7489481837012116E-4 26 0.0 6.872370459253029E-5 0.0 0.00481065932147712 3.436185229626514E-4 27 6.872370459253029E-5 6.872370459253029E-5 0.0 0.006666199345475438 3.436185229626514E-4 28 6.872370459253029E-5 6.872370459253029E-5 0.0 0.013744740918506056 4.123422275551817E-4 29 6.872370459253029E-5 6.872370459253029E-5 0.0 0.02687096849567934 4.123422275551817E-4 30 6.872370459253029E-5 6.872370459253029E-5 0.0 0.052092568081137956 4.123422275551817E-4 31 6.872370459253029E-5 6.872370459253029E-5 0.0 0.10624684730005182 4.123422275551817E-4 32 6.872370459253029E-5 6.872370459253029E-5 0.0 0.16967882663895728 4.123422275551817E-4 33 6.872370459253029E-5 6.872370459253029E-5 0.0 0.23036185779416152 4.123422275551817E-4 34 6.872370459253029E-5 6.872370459253029E-5 0.0 0.3056143143229822 4.123422275551817E-4 35 6.872370459253029E-5 6.872370459253029E-5 0.0 0.383478271626319 4.123422275551817E-4 36 6.872370459253029E-5 6.872370459253029E-5 0.0 0.5045007154137648 4.123422275551817E-4 37 6.872370459253029E-5 1.3744740918506058E-4 0.0 0.6637335389546575 4.123422275551817E-4 38 6.872370459253029E-5 1.3744740918506058E-4 0.0 0.8768457468960938 4.123422275551817E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 420 0.0 20.952234 4 GTATAGT 85 6.102495E-6 20.710718 1 CGTCTAT 65 4.9250666E-4 20.312435 1 GTATTAA 235 0.0 17.791388 1 GTCCTAA 335 0.0 17.735485 1 AGGACGT 490 0.0 17.51008 5 ATACCGT 340 0.0 17.470467 6 GACGTGA 265 0.0 17.43384 7 TTAGGAC 370 0.0 17.243715 3 TACCGTC 360 0.0 17.110992 7 ATAACGC 595 0.0 17.008867 3 CTATACT 170 2.4683686E-9 16.823412 4 TGTAGGA 665 0.0 16.541807 2 TATGACG 80 0.0019887062 16.499884 4 TTAACGG 215 1.2732926E-11 16.371979 35 CGTCGTA 365 0.0 16.273859 10 CTATTAG 95 3.3409492E-4 16.214314 1 TGGTCGG 585 0.0 16.170826 37 TAACGGC 220 1.8189894E-11 15.999887 36 GTCTAGA 250 0.0 15.8436985 1 >>END_MODULE