##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062674_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1798939 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15783414557136 32.0 32.0 32.0 32.0 32.0 2 30.837612059108174 32.0 32.0 32.0 32.0 32.0 3 30.821041736267876 32.0 32.0 32.0 32.0 32.0 4 30.885020003457594 32.0 32.0 32.0 32.0 32.0 5 30.706348019582656 32.0 32.0 32.0 32.0 32.0 6 34.34613235912946 36.0 36.0 36.0 32.0 36.0 7 34.226237799058225 36.0 36.0 36.0 32.0 36.0 8 34.226851494130706 36.0 36.0 36.0 32.0 36.0 9 34.37188754037797 36.0 36.0 36.0 32.0 36.0 10 34.05064929939259 36.0 36.0 36.0 32.0 36.0 11 34.36092274390627 36.0 36.0 36.0 32.0 36.0 12 34.139731808582724 36.0 36.0 36.0 32.0 36.0 13 34.264628761731224 36.0 36.0 36.0 32.0 36.0 14 34.169110792528265 36.0 36.0 36.0 32.0 36.0 15 34.11371425045541 36.0 36.0 36.0 32.0 36.0 16 34.11802290127681 36.0 36.0 36.0 32.0 36.0 17 34.047957712851854 36.0 36.0 36.0 32.0 36.0 18 34.057904687151705 36.0 36.0 36.0 32.0 36.0 19 34.04513549375493 36.0 36.0 36.0 32.0 36.0 20 34.0310021629416 36.0 36.0 36.0 32.0 36.0 21 34.014758699433386 36.0 36.0 36.0 32.0 36.0 22 33.963452901960544 36.0 36.0 36.0 32.0 36.0 23 33.94134876168675 36.0 36.0 36.0 32.0 36.0 24 33.91156064769289 36.0 36.0 36.0 32.0 36.0 25 33.47714569532374 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 10.0 4 74.0 5 164.0 6 290.0 7 62.0 8 285.0 9 332.0 10 219.0 11 72.0 12 146.0 13 116.0 14 305.0 15 398.0 16 631.0 17 817.0 18 1093.0 19 1635.0 20 2413.0 21 3631.0 22 5307.0 23 8029.0 24 10966.0 25 15684.0 26 21551.0 27 27815.0 28 37458.0 29 49647.0 30 63706.0 31 85704.0 32 122410.0 33 177147.0 34 399093.0 35 761728.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.496977971883354 17.4643872109727 10.890253014245117 26.148381802898836 2 17.08655849541603 20.062972656258683 36.62420311349977 26.226265734825528 3 19.559089137773945 23.43880898365471 28.232103874271974 28.769998004299374 4 12.737820895937288 15.218480270198897 35.676039306711886 36.36765952715193 5 14.75594708169129 36.310632318292804 33.54883088039441 15.384589719621491 6 34.32323099750185 35.12623099972638 16.810556733321025 13.739981269450741 7 30.278741962040804 30.336926773913625 20.67201788932648 18.712313374719088 8 28.142729413780764 32.79729777097263 19.641957992156147 19.41801482309046 9 27.34383346390798 14.207448986859442 18.82406030768135 39.624657241551226 10 16.002491110531064 26.689666955886302 31.730659526522036 25.577182407060594 11 37.46665457057098 21.223638813551116 22.095392556337288 19.21431405954062 12 24.510968488903483 23.79752965471943 28.825945861698514 22.865555994678573 13 29.5419456457008 19.47293138089752 25.24803392830308 25.737089045098593 14 23.11140127657964 20.022363520189508 25.15450754615746 31.711727657073396 15 24.959053821893725 27.51861430230662 22.386025485413256 25.136306390386398 16 25.51146248050816 25.872750160553753 24.187241847931944 24.428545511006142 17 23.796772841599186 25.967933237193524 25.48265169987683 24.752642221330458 18 24.56906820322258 24.927417325885074 26.600548155041935 23.902966315850406 19 25.236833272382057 25.232435874528324 25.502124388469465 24.02860646462015 20 25.284657281426952 24.63068855393322 25.357345209776472 24.727308954863357 21 26.30532505382497 24.528321841025424 24.670983054319244 24.495370050830363 22 25.3797113520068 24.84434910562325 25.15111345437256 24.624826087997388 23 24.1425763430062 24.588635375548527 25.75619336238775 25.512594919057513 24 24.403648275919654 25.253929244377147 25.672417776021238 24.670004703681954 25 24.50503385123713 24.953730426926914 25.629753241931564 24.911482479904393 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 276.0 1 276.0 2 663.5 3 1051.0 4 1051.0 5 1051.0 6 2667.5 7 4284.0 8 4284.0 9 4284.0 10 4637.5 11 4991.0 12 4991.0 13 4991.0 14 5562.5 15 6134.0 16 6134.0 17 6134.0 18 9900.0 19 13666.0 20 13666.0 21 13666.0 22 21200.0 23 28734.0 24 28734.0 25 28734.0 26 41962.5 27 55191.0 28 55191.0 29 55191.0 30 68753.5 31 82316.0 32 82316.0 33 82316.0 34 99573.5 35 116831.0 36 116831.0 37 116831.0 38 131172.5 39 145514.0 40 145514.0 41 145514.0 42 164351.5 43 183189.0 44 183189.0 45 183189.0 46 206146.5 47 229104.0 48 229104.0 49 229104.0 50 232501.0 51 235898.0 52 235898.0 53 235898.0 54 218832.5 55 201767.0 56 201767.0 57 201767.0 58 185835.5 59 169904.0 60 169904.0 61 169904.0 62 151290.0 63 132676.0 64 132676.0 65 132676.0 66 109916.0 67 87156.0 68 87156.0 69 87156.0 70 66544.0 71 45932.0 72 45932.0 73 45932.0 74 36134.5 75 26337.0 76 26337.0 77 26337.0 78 21377.5 79 16418.0 80 16418.0 81 16418.0 82 11450.0 83 6482.0 84 6482.0 85 6482.0 86 4825.0 87 3168.0 88 3168.0 89 3168.0 90 2096.5 91 1025.0 92 1025.0 93 1025.0 94 622.5 95 220.0 96 220.0 97 220.0 98 447.5 99 675.0 100 675.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00817148330210196 2 0.003502064272329412 3 0.00400235916837647 4 0.014675316950713726 5 0.03446475950546406 6 0.04485977567888628 7 0.06776216425348497 8 0.08938602142707451 9 0.09755750472917649 10 0.11951489183346406 11 0.12318372107114248 12 0.13502403361092288 13 0.12279460281866145 14 0.1257963721949438 15 0.11495664944725752 16 0.11301105818485228 17 0.12507372401176473 18 0.1315775576603765 19 0.13463491535844183 20 0.1232393093929255 21 0.13202226423464053 22 0.15409082798249413 23 0.1411943373288366 24 0.13752550809115818 25 0.1335231489227817 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1798939.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.38870693259445 #Duplication Level Percentage of deduplicated Percentage of total 1 78.80390943948836 42.86042735647046 2 13.241817869760041 14.40410702746342 3 3.779753529604784 6.167277209973422 4 1.474282465660127 3.2073726784260557 5 0.7390930841307404 2.0099158574347102 6 0.4295235735151675 1.401673905633428 7 0.27980276193897374 1.0652677292620534 8 0.18514595306599713 0.8055879184849923 9 0.13867450995569067 0.678809455290109 >10 0.7504120956094453 7.558927855860742 >50 0.0775661365927899 2.9916872123115508 >100 0.08493949675134152 9.71608591055696 >500 0.011591404651006295 4.202980597527367 >1k 0.003487679275524018 2.929879285304772 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4037 0.2244100550379974 No Hit TATCAACGCAGAGTACTTTTTTTTT 2501 0.13902639277929935 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2365 0.13146638101681046 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2140 0.11895900861563401 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1887 0.10489516320453333 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1870 0.10395016173422222 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.558832178300654E-5 7 0.0 0.0 0.0 0.0 5.558832178300654E-5 8 0.0 0.0 0.0 0.0 1.1117664356601308E-4 9 0.0 0.0 0.0 0.0 1.1117664356601308E-4 10 0.0 0.0 0.0 0.0 1.1117664356601308E-4 11 0.0 0.0 0.0 0.0 1.1117664356601308E-4 12 0.0 0.0 0.0 0.0 3.3352993069803925E-4 13 0.0 0.0 0.0 0.0 4.4470657426405233E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACG 45 6.771247E-4 14.775419 4 CGGTTCT 275 0.0 13.129561 12 CGAACGT 75 1.4813164E-5 12.664645 4 AAGACGG 500 0.0 12.349402 5 CGGTCCA 325 0.0 12.27838 10 CAAGACG 500 0.0 11.778119 4 TATTAGG 90 7.512672E-6 11.604091 2 AACCGCG 115 7.066228E-8 11.566267 7 AGAATTT 375 0.0 11.402623 17 GCGCAAG 475 0.0 11.191049 1 CGAGCCG 340 0.0 11.178108 15 CGGACCA 525 0.0 11.039405 9 GGTTCTA 320 0.0 10.985985 13 GGACGTG 425 0.0 10.953631 6 GTTTTCG 200 0.0 10.9266 15 AGGCCCG 375 0.0 10.894627 10 TCTATAC 140 8.409188E-9 10.85239 3 CCGTCGT 255 0.0 10.8052025 9 TTCGTTC 115 8.7914486E-7 10.741601 18 ACGCGCG 115 8.8009074E-7 10.740704 13 >>END_MODULE