##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062674_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1798939 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.287231529251407 32.0 32.0 32.0 32.0 32.0 2 31.426301836804917 32.0 32.0 32.0 32.0 32.0 3 31.4980296719344 32.0 32.0 32.0 32.0 32.0 4 31.593945653521324 32.0 32.0 32.0 32.0 32.0 5 31.535979819215658 32.0 32.0 32.0 32.0 32.0 6 35.12452673492542 36.0 36.0 36.0 36.0 36.0 7 35.13440978265522 36.0 36.0 36.0 36.0 36.0 8 35.07788146235087 36.0 36.0 36.0 36.0 36.0 9 35.19689439163863 36.0 36.0 36.0 36.0 36.0 10 35.08690567050912 36.0 36.0 36.0 36.0 36.0 11 35.208135462069585 36.0 36.0 36.0 36.0 36.0 12 35.1193976004745 36.0 36.0 36.0 36.0 36.0 13 35.1602577964011 36.0 36.0 36.0 36.0 36.0 14 35.12760299265289 36.0 36.0 36.0 36.0 36.0 15 35.084517596205316 36.0 36.0 36.0 36.0 36.0 16 35.10053370347744 36.0 36.0 36.0 36.0 36.0 17 35.073020819494154 36.0 36.0 36.0 36.0 36.0 18 35.08729701229447 36.0 36.0 36.0 36.0 36.0 19 35.06589106134227 36.0 36.0 36.0 36.0 36.0 20 35.062022114146174 36.0 36.0 36.0 36.0 36.0 21 35.054097442992784 36.0 36.0 36.0 36.0 36.0 22 35.038014629734526 36.0 36.0 36.0 36.0 36.0 23 35.00664836328525 36.0 36.0 36.0 36.0 36.0 24 34.982457993294936 36.0 36.0 36.0 36.0 36.0 25 34.95580506064964 36.0 36.0 36.0 32.0 36.0 26 34.917758745571696 36.0 36.0 36.0 32.0 36.0 27 34.900677010170995 36.0 36.0 36.0 32.0 36.0 28 34.88532796276027 36.0 36.0 36.0 32.0 36.0 29 34.855768872652156 36.0 36.0 36.0 32.0 36.0 30 34.842925746787415 36.0 36.0 36.0 32.0 36.0 31 34.84440217261397 36.0 36.0 36.0 32.0 36.0 32 34.80842374310635 36.0 36.0 36.0 32.0 36.0 33 34.789760519950924 36.0 36.0 36.0 32.0 36.0 34 34.77385892462168 36.0 36.0 36.0 32.0 36.0 35 34.752581938576014 36.0 36.0 36.0 32.0 36.0 36 34.72330245772647 36.0 36.0 36.0 32.0 36.0 37 34.711465480486 36.0 36.0 36.0 32.0 36.0 38 34.67977680177038 36.0 36.0 36.0 32.0 36.0 39 34.66544335299863 36.0 36.0 36.0 32.0 36.0 40 34.6595626644372 36.0 36.0 36.0 32.0 36.0 41 34.6321114834911 36.0 36.0 36.0 32.0 36.0 42 34.60649916422958 36.0 36.0 36.0 32.0 36.0 43 34.595526029509614 36.0 36.0 36.0 32.0 36.0 44 34.56019798336686 36.0 36.0 36.0 32.0 36.0 45 34.53237880773056 36.0 36.0 36.0 32.0 36.0 46 34.522099415266446 36.0 36.0 36.0 32.0 36.0 47 34.490507460230724 36.0 36.0 36.0 32.0 36.0 48 34.44658379189067 36.0 36.0 36.0 32.0 36.0 49 34.43310695915759 36.0 36.0 36.0 32.0 36.0 50 33.91684487356158 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 5.0 20 8.0 21 42.0 22 142.0 23 467.0 24 1218.0 25 2774.0 26 5671.0 27 10484.0 28 18053.0 29 27850.0 30 40513.0 31 57704.0 32 84415.0 33 138333.0 34 303238.0 35 1108021.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87276909194725 18.152882354609094 11.342389379596153 26.631959173847513 2 16.454013704219665 20.55810840409103 36.32296418513483 26.664913706554476 3 18.83473082918087 23.803123186423942 28.643272786297647 28.71887319809754 4 12.49078621005551 15.631257177862 35.92605398530463 35.95190262677786 5 14.392594746125356 36.59901753200081 33.45016145628062 15.55822626559322 6 34.48592909654377 35.3925260919716 16.50963770029323 13.611907111191407 7 30.237212045544627 30.42921410898313 20.689417484417202 18.644156361055046 8 28.0518839448608 32.99841350841441 19.529188888110653 19.420513658614137 9 27.47130391858757 13.991302651173832 18.704636455154954 39.83275697508365 10 15.87941558885543 26.81235995217181 31.73181525332432 25.576409205648442 11 37.692995704690375 21.086373690269653 22.071676693873442 19.148953911166526 12 24.62923979078779 23.77734875946322 28.677737266244158 22.915674183504834 13 29.684497362056188 19.446017902774916 25.219421003157972 25.650063732010924 14 23.225857019054008 19.896672427469746 25.201743916830978 31.67572663664527 15 25.043817494645452 27.491816009325497 22.362514793442134 25.101851702586913 16 25.5301041336032 25.854739932815956 24.181253505538542 24.433902428042305 17 23.870459198449755 25.915331203559433 25.40236217014585 24.811847427844967 18 24.666094848129923 24.805955065735972 26.650820289070392 23.877129797063716 19 25.37173300484341 25.13092439487943 25.526379716043735 23.97096288423343 20 25.489580247023387 24.515283731132627 25.29574376896604 24.699392252877946 21 26.436638485240465 24.454803637032718 24.608394170119162 24.50016370760765 22 25.524545301424894 24.751923216962886 25.110356715819716 24.613174765792504 23 24.312052826693957 24.52395550933078 25.717436778011926 25.446554885963334 24 24.584546780074255 25.12208585171593 25.574852732638515 24.7185146355713 25 24.702671963863143 24.674043978144898 25.65200932327333 24.971274734718634 26 24.09431337026992 25.613986911173754 26.058693485437807 24.23300623311852 27 24.966382962401727 25.06210605251206 25.302247602614653 24.669263382471556 28 24.17069172439977 24.973998562486 25.938789475351857 24.91652023776237 29 24.120328704864367 25.153660018488676 25.76991215377509 24.95609912287187 30 24.134726080206164 25.322982046639712 26.027564025239318 24.5147278479148 31 24.604892105846833 25.067442531403234 25.181454179380182 25.146211183369754 32 24.358024368808504 25.178063291751418 25.20146597522206 25.26244636421802 33 24.045951530318703 24.81646125855296 25.816661932394595 25.320925278733743 34 24.800785351810152 24.970941204787934 26.019281365293658 24.208992078108263 35 25.237209266128534 24.79761681746852 25.85657434743479 24.108599568968152 36 24.061905378670428 25.37262241799194 25.548670633078718 25.016801570258913 37 24.960268247005597 25.060438402858576 25.318757334184205 24.660536015951624 38 24.18875792897925 24.933474675906186 25.85062639700401 25.027140998110553 39 24.896119323668007 24.576708826702852 25.39780392775964 25.1293679218695 40 25.039815135477077 24.77654884351276 25.973643353109804 24.209992667900355 41 23.833326199498707 25.048375737031662 26.531805692132977 24.58649237133666 42 25.039981900442427 25.352610622150056 25.831059307736393 23.77634816967112 43 24.073856867853774 24.41655887164601 26.188881335053605 25.320702925446607 44 23.65850092749115 25.00790743877363 25.985539253971368 25.348052379763853 45 23.810145869315193 25.207636278939976 26.116727693379264 24.86549015836557 46 23.6373905048423 24.699906278037375 26.265051936197914 25.39765128092241 47 23.902589248440332 24.573317939074087 26.537864819207325 24.98622799327826 48 24.40160561308638 25.306972609966206 25.634832531842385 24.65658924510503 49 23.53298249690512 25.24393545306428 26.05324582990307 25.16983622012753 50 23.37258058508997 25.65965345089906 25.769440508478063 25.198325455532906 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 69.0 1 71.5 2 74.0 3 202.5 4 331.0 5 369.0 6 407.0 7 355.0 8 303.0 9 442.0 10 581.0 11 862.0 12 1143.0 13 1905.0 14 2667.0 15 3509.0 16 4351.0 17 5037.0 18 5723.0 19 6186.5 20 6650.0 21 7739.5 22 8829.0 23 9611.0 24 10393.0 25 12265.0 26 14137.0 27 17516.0 28 20895.0 29 24188.0 30 27481.0 31 30254.5 32 33028.0 33 38018.0 34 43008.0 35 49315.5 36 55623.0 37 64070.0 38 72517.0 39 76679.5 40 80842.0 41 86646.0 42 92450.0 43 94784.5 44 97119.0 45 105369.5 46 113620.0 47 121014.0 48 128408.0 49 132171.0 50 135934.0 51 129883.0 52 123832.0 53 121759.0 54 119686.0 55 121113.0 56 122540.0 57 119177.5 58 115815.0 59 105909.5 60 96004.0 61 84646.5 62 73289.0 63 64391.5 64 55494.0 65 47775.0 66 40056.0 67 34804.0 68 29552.0 69 26969.0 70 24386.0 71 19126.5 72 13867.0 73 12420.5 74 10974.0 75 8134.0 76 5294.0 77 4779.0 78 4264.0 79 3627.0 80 2990.0 81 2399.5 82 1809.0 83 1528.5 84 1248.0 85 1012.0 86 776.0 87 561.5 88 347.0 89 218.5 90 90.0 91 59.0 92 28.0 93 17.0 94 6.0 95 5.0 96 4.0 97 2.5 98 1.0 99 2.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01600943667350588 2 0.004280300777291504 3 3.8911825248104577E-4 4 2.779416089150327E-4 5 0.0 6 7.782365049620915E-4 7 0.0 8 5.5588321783006535E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.5588321783006535E-5 47 0.0 48 0.0 49 0.0 50 1.1117664356601307E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1798939.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.18648526618896 #Duplication Level Percentage of deduplicated Percentage of total 1 79.76094830433115 46.41009243327224 2 12.966451532512552 15.089444821025896 3 3.495950545712113 6.102512247582093 4 1.3475500643952039 3.1363680786953405 5 0.6856732838593785 1.9948459214351562 6 0.3881350382800908 1.3550528211705715 7 0.25250223478408484 1.0284552294760756 8 0.163560032142655 0.761358672032479 9 0.13569703702921265 0.7106160281189201 >10 0.6544618266210764 6.963402860872138 >50 0.0706486381304922 2.9215051701930994 >100 0.06774138008301607 8.412595631053025 >500 0.00788979039419111 2.980207623395921 >1k 0.0027902917247749045 2.1335424616770955 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2149 0.11945930351168106 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1919 0.10667398950158956 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.558832178300654E-5 0.0 3 0.0 0.0 0.0 5.558832178300654E-5 0.0 4 0.0 0.0 0.0 5.558832178300654E-5 0.0 5 0.0 0.0 0.0 5.558832178300654E-5 5.558832178300654E-5 6 0.0 0.0 0.0 5.558832178300654E-5 5.558832178300654E-5 7 0.0 0.0 0.0 5.558832178300654E-5 5.558832178300654E-5 8 0.0 0.0 0.0 1.1117664356601308E-4 5.558832178300654E-5 9 0.0 0.0 0.0 1.6676496534901963E-4 1.1117664356601308E-4 10 0.0 0.0 0.0 1.6676496534901963E-4 1.6676496534901963E-4 11 0.0 0.0 0.0 1.6676496534901963E-4 2.2235328713202617E-4 12 0.0 0.0 0.0 1.6676496534901963E-4 3.8911825248104577E-4 13 0.0 5.558832178300654E-5 0.0 1.6676496534901963E-4 4.4470657426405233E-4 14 0.0 5.558832178300654E-5 0.0 1.6676496534901963E-4 4.4470657426405233E-4 15 0.0 5.558832178300654E-5 0.0 1.6676496534901963E-4 5.558832178300654E-4 16 0.0 5.558832178300654E-5 0.0 2.779416089150327E-4 5.558832178300654E-4 17 0.0 5.558832178300654E-5 0.0 3.8911825248104577E-4 5.558832178300654E-4 18 0.0 5.558832178300654E-5 0.0 6.114715396130719E-4 6.670598613960785E-4 19 0.0 5.558832178300654E-5 0.0 6.114715396130719E-4 6.670598613960785E-4 20 0.0 5.558832178300654E-5 0.0 7.782365049620915E-4 6.670598613960785E-4 21 0.0 5.558832178300654E-5 0.0 0.0010005897920941178 6.670598613960785E-4 22 0.0 5.558832178300654E-5 0.0 0.0017788262970562093 6.670598613960785E-4 23 0.0 5.558832178300654E-5 0.0 0.00289059273271634 7.22648183179085E-4 24 0.0 5.558832178300654E-5 0.0 0.0041691241337254905 7.22648183179085E-4 25 0.0 5.558832178300654E-5 0.0 0.005503243856517647 7.22648183179085E-4 26 0.0 5.558832178300654E-5 0.0 0.006948540222875817 7.22648183179085E-4 27 0.0 5.558832178300654E-5 0.0 0.009283249737762091 7.22648183179085E-4 28 0.0 5.558832178300654E-5 0.0 0.019845030876533335 7.22648183179085E-4 29 0.0 5.558832178300654E-5 0.0 0.04413712749570719 7.22648183179085E-4 30 0.0 5.558832178300654E-5 0.0 0.08899690317459347 7.22648183179085E-4 31 0.0 1.1117664356601308E-4 0.0 0.178382924601668 7.22648183179085E-4 32 0.0 1.1117664356601308E-4 0.0 0.2868913287220968 7.22648183179085E-4 33 0.0 1.1117664356601308E-4 0.0 0.39139737367414906 7.22648183179085E-4 34 0.0 1.1117664356601308E-4 0.0 0.5103563822897831 7.782365049620915E-4 35 0.0 1.1117664356601308E-4 0.0 0.646047475762102 7.782365049620915E-4 36 0.0 1.1117664356601308E-4 0.0 0.8425521932650301 7.782365049620915E-4 37 0.0 1.6676496534901963E-4 0.0 1.1217723335810719 7.782365049620915E-4 38 0.0 1.6676496534901963E-4 0.0 1.4770928864180497 8.338248267450981E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 565 0.0 19.858206 36 TAGGACG 655 0.0 19.144844 4 CTAGCGG 615 0.0 18.601437 29 ATACGAA 620 0.0 18.451426 40 TAGCGGC 610 0.0 18.393255 30 TCTAGCG 640 0.0 17.874819 28 CGAATGC 640 0.0 17.874819 43 CAATACG 640 0.0 17.531073 38 CGTCTTA 165 1.6607373E-9 17.333158 15 CGGTCCA 695 0.0 17.093353 10 GTCCTAA 440 0.0 17.0055 1 GTATCAA 3750 0.0 16.960152 1 AATACGA 675 0.0 16.947977 39 CGAGCCG 565 0.0 16.743195 15 CGTCGTA 530 0.0 16.603605 10 TCCTACA 800 0.0 16.501667 2 GCAATAC 695 0.0 16.143723 37 GATTTCG 355 0.0 16.112513 41 GACGTGA 455 0.0 15.955883 7 GCGAAAG 745 0.0 15.946147 18 >>END_MODULE