##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062673_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1623619 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.930414709362232 32.0 32.0 32.0 32.0 32.0 2 30.595045389343188 32.0 32.0 32.0 32.0 32.0 3 30.60305404161937 32.0 32.0 32.0 32.0 32.0 4 30.630330761096044 32.0 32.0 32.0 32.0 32.0 5 30.459878210343682 32.0 32.0 32.0 32.0 32.0 6 34.059802823199284 36.0 36.0 36.0 32.0 36.0 7 33.8858777829035 36.0 36.0 36.0 32.0 36.0 8 33.88354780277886 36.0 36.0 36.0 32.0 36.0 9 34.02379006404828 36.0 36.0 36.0 32.0 36.0 10 33.69106668497967 36.0 36.0 36.0 27.0 36.0 11 34.06292301334241 36.0 36.0 36.0 32.0 36.0 12 33.798974389927686 36.0 36.0 36.0 32.0 36.0 13 33.94306730827861 36.0 36.0 36.0 32.0 36.0 14 33.84088385267726 36.0 36.0 36.0 32.0 36.0 15 33.805419867592086 36.0 36.0 36.0 32.0 36.0 16 33.795474184522355 36.0 36.0 36.0 32.0 36.0 17 33.700788793429986 36.0 36.0 36.0 27.0 36.0 18 33.74119359283181 36.0 36.0 36.0 32.0 36.0 19 33.70882700929221 36.0 36.0 36.0 27.0 36.0 20 33.68500922938202 36.0 36.0 36.0 27.0 36.0 21 33.62969514399622 36.0 36.0 36.0 27.0 36.0 22 33.5796760200515 36.0 36.0 36.0 27.0 36.0 23 33.565048204042945 36.0 36.0 36.0 27.0 36.0 24 33.55255019804523 36.0 36.0 36.0 27.0 36.0 25 33.0647966056076 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 6.0 4 72.0 5 158.0 6 269.0 7 74.0 8 224.0 9 279.0 10 200.0 11 65.0 12 145.0 13 96.0 14 523.0 15 584.0 16 881.0 17 1207.0 18 1678.0 19 2602.0 20 3996.0 21 5743.0 22 8087.0 23 11127.0 24 14411.0 25 18901.0 26 24469.0 27 30681.0 28 39336.0 29 50304.0 30 63232.0 31 84100.0 32 116909.0 33 164378.0 34 352166.0 35 626714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.724218260122925 18.21626689103871 12.060469579807503 24.999045269030866 2 15.476957455274269 20.57513048469969 38.667386893755825 25.280525166270213 3 19.150666048261474 25.37376865609588 28.049910965666808 27.425654329975835 4 12.158280516283709 16.20504493427565 36.07228415439231 35.56439039504833 5 13.8068430719334 37.613051533446736 33.29369585402235 15.286409540597507 6 32.996545651501464 35.511392695217516 17.708373128791866 13.783688524489149 7 29.467870774339517 31.29344608540717 21.00628822284826 18.23239491740506 8 27.715873659708723 33.41903882452586 19.895920533687743 18.969166982077667 9 27.181520023673304 15.487892089169462 19.35366936279345 37.97691852436378 10 16.251919270399764 26.845428590808467 31.14151112097724 25.76114101781453 11 36.03864150422156 21.847459048539903 22.74578892454473 19.368110522693804 12 25.120446707419962 24.319318837791034 28.67112683352822 21.889107621260788 13 29.353784830093645 20.194640300235932 25.591154238439916 24.860420631230507 14 23.568128447246643 21.043374872963717 25.164283811384426 30.224212868405214 15 24.802867516118372 28.0388740078631 23.431819415052363 23.726439060966165 16 24.96237217174691 26.259753792841927 25.310996081526447 23.466877953884715 17 23.03362748906937 26.79616919196591 26.3214499349404 23.84875338402432 18 24.351886170508656 24.663632052286967 28.324903963150465 22.65957781405391 19 24.777578918934253 26.229591100443177 25.948858877786506 23.04397110283606 20 25.05135217633946 24.588488849285756 26.723481403143108 23.636677571231683 21 26.028994766683894 24.945884575963255 24.548914793029315 24.476205864323536 22 24.855273830856206 25.955531978546293 25.22482288971203 23.964371300885475 23 22.76227153354542 25.695313916640046 26.17836696982892 25.364047579985616 24 23.678059262219655 26.64838621342984 25.92722109973825 23.74633342461225 25 24.13497930610863 25.548861450527383 25.763478473234237 24.55268077012975 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 756.0 1 756.0 2 1284.5 3 1813.0 4 1813.0 5 1813.0 6 3822.5 7 5832.0 8 5832.0 9 5832.0 10 5858.0 11 5884.0 12 5884.0 13 5884.0 14 5911.5 15 5939.0 16 5939.0 17 5939.0 18 9490.5 19 13042.0 20 13042.0 21 13042.0 22 21502.0 23 29962.0 24 29962.0 25 29962.0 26 44861.5 27 59761.0 28 59761.0 29 59761.0 30 73414.0 31 87067.0 32 87067.0 33 87067.0 34 101409.0 35 115751.0 36 115751.0 37 115751.0 38 124647.0 39 133543.0 40 133543.0 41 133543.0 42 151716.0 43 169889.0 44 169889.0 45 169889.0 46 205703.5 47 241518.0 48 241518.0 49 241518.0 50 225607.5 51 209697.0 52 209697.0 53 209697.0 54 184086.5 55 158476.0 56 158476.0 57 158476.0 58 145425.5 59 132375.0 60 132375.0 61 132375.0 62 117526.0 63 102677.0 64 102677.0 65 102677.0 66 85334.5 67 67992.0 68 67992.0 69 67992.0 70 51819.0 71 35646.0 72 35646.0 73 35646.0 74 28372.0 75 21098.0 76 21098.0 77 21098.0 78 17898.5 79 14699.0 80 14699.0 81 14699.0 82 10140.5 83 5582.0 84 5582.0 85 5582.0 86 4163.5 87 2745.0 88 2745.0 89 2745.0 90 1856.0 91 967.0 92 967.0 93 967.0 94 580.5 95 194.0 96 194.0 97 194.0 98 454.0 99 714.0 100 714.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007698850530820346 2 0.003510675842054078 3 0.005419990773697524 4 0.015274519453147567 5 0.035476303246020156 6 0.04539242272971676 7 0.06540943410984966 8 0.0860423535324482 9 0.09478824773546012 10 0.11757684530668833 11 0.11967093265107147 12 0.13272818315134277 13 0.12077956712750959 14 0.12533728664175525 15 0.11499003152833269 16 0.11172571890326487 17 0.12496774181627586 18 0.12971023374326118 19 0.13211227510887713 20 0.12158024758271492 21 0.12841682685408337 22 0.15114383362106504 23 0.13950317161846468 24 0.13642363140613656 25 0.13094204982819246 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1623619.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.9568981913086 #Duplication Level Percentage of deduplicated Percentage of total 1 77.04080168724717 34.63515478030367 2 13.47912486375874 12.119592884158763 3 4.248446426256516 5.729909203693293 4 1.7612587288617119 3.1672291744795835 5 0.9248581393859071 2.078937660688766 6 0.5350516995716043 1.443255887083635 7 0.34494265596865 1.0855286306355534 8 0.24287049472373415 0.8734963283974136 9 0.16855556267331118 0.6819961743614509 >10 0.9756280268316998 8.190714997384644 >50 0.11904292443633484 3.782028195471051 >100 0.13172961901404023 12.760158553840592 >500 0.018779289426107793 5.7414514969998764 >1k 0.008498656528603526 6.366079613666445 >5k 4.1122531590017064E-4 1.3444664188352904 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 8822 0.5433540750631768 No Hit TCCATGTACTCTGCGTTGATACCAC 7738 0.4765896432599027 No Hit GTATCAACGCAGAGTACTTTTTTTT 5257 0.3237828579241805 No Hit GAGTACATGGAAGCAGTGGTATCAA 3579 0.22043348839844817 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3565 0.21957121713899627 No Hit TATCAACGCAGAGTACTTTTTTTTT 3384 0.20842328157036843 No Hit CATGTACTCTGCGTTGATACCACTG 3165 0.19493489544037118 No Hit CCCATGTACTCTGCGTTGATACCAC 2560 0.15767245887120068 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2468 0.1520061048805169 No Hit GCTTCCATGTACTCTGCGTTGATAC 2446 0.15065110718709254 No Hit GTACATGGGAAGCAGTGGTATCAAC 2387 0.14701724973654534 No Hit GCGTTGATACCACTGCTTCCATGTA 2157 0.1328513647598359 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2135 0.13149636706641152 No Hit CATGGAAGCAGTGGTATCAACGCAG 2091 0.12878637167956275 No Hit GAATAGGACCGCGGTTCTATTTTGT 2018 0.12429024296956366 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2006 0.12355115331860493 No Hit GTATCAACGCAGAGTACATGGAAGC 2005 0.12348956251435836 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2004 0.12342797171011179 No Hit GTATCTGATCGTCTTCGAACCTCCG 1957 0.12053320391052336 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1949 0.12004047747655085 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1855 0.11425094187737393 No Hit GTCCTATTCCATTATTCCTAGCTGC 1841 0.11338867061792206 No Hit GGTATCAACGCAGAGTACTTTTTTT 1829 0.11264958096696331 No Hit CTATTGGAGCTGGAATTACCGCGGC 1804 0.11110981086079924 No Hit GTCCTACAGTGGACATTTCTAAATT 1724 0.1061825465210742 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1685 0.10378050515545828 No Hit GAATAACGCCGCCGCATCGCCAGTC 1676 0.1032261879172392 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1653 0.10180959941956827 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.159080424656278E-5 0.0 9 0.0 0.0 0.0 6.159080424656278E-5 0.0 10 0.0 0.0 0.0 6.159080424656278E-5 0.0 11 0.0 0.0 0.0 1.2318160849312555E-4 0.0 12 0.0 0.0 0.0 1.2318160849312555E-4 6.159080424656278E-5 13 0.0 0.0 0.0 1.2318160849312555E-4 6.159080424656278E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCTA 60 1.465196E-6 15.835106 10 GCGCTAT 60 1.465196E-6 15.835106 11 CGAACGA 105 8.913048E-11 14.477812 16 CACCGGT 50 0.0014986799 13.30108 7 AGGATCG 50 0.0015004225 13.299028 5 CTTATAC 100 1.0108124E-8 13.296568 3 GAGCGTT 65 5.4486216E-5 13.154914 7 TCTAGTA 65 5.475487E-5 13.14802 2 ACGAACG 120 7.403287E-10 12.667695 15 CGGTCCA 380 0.0 12.251371 10 CGCTATC 70 1.0898168E-4 12.215653 12 CGGCTAA 70 1.0898168E-4 12.215653 9 CGTCTTA 195 0.0 12.180476 15 CGGTGTT 55 0.0030659703 12.092263 14 CCAACGT 55 0.0030659703 12.092263 19 GACCATA 325 0.0 11.693618 11 ATCCCCG 295 0.0 11.594519 12 TCTCGTC 205 0.0 11.586663 12 CCGACCA 320 0.0 11.579422 9 ACGGTAT 320 0.0 11.579422 9 >>END_MODULE