##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062671_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1512208 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.211926533915967 32.0 32.0 32.0 32.0 32.0 2 31.33148217705501 32.0 32.0 32.0 32.0 32.0 3 31.436898230931195 32.0 32.0 32.0 32.0 32.0 4 31.561865827981336 32.0 32.0 32.0 32.0 32.0 5 31.477822495318105 32.0 32.0 32.0 32.0 32.0 6 35.05416715160877 36.0 36.0 36.0 36.0 36.0 7 35.07425499666712 36.0 36.0 36.0 36.0 36.0 8 35.00960185371324 36.0 36.0 36.0 36.0 36.0 9 35.13059248463174 36.0 36.0 36.0 36.0 36.0 10 35.014978098251035 36.0 36.0 36.0 36.0 36.0 11 35.14629535090411 36.0 36.0 36.0 36.0 36.0 12 35.04833197549544 36.0 36.0 36.0 36.0 36.0 13 35.09586776422291 36.0 36.0 36.0 36.0 36.0 14 35.05624292425381 36.0 36.0 36.0 36.0 36.0 15 35.022082279686394 36.0 36.0 36.0 36.0 36.0 16 35.04059229947203 36.0 36.0 36.0 36.0 36.0 17 35.01267153724884 36.0 36.0 36.0 36.0 36.0 18 35.026184889909324 36.0 36.0 36.0 36.0 36.0 19 34.99884275179076 36.0 36.0 36.0 36.0 36.0 20 34.9881550686149 36.0 36.0 36.0 36.0 36.0 21 34.96820080306413 36.0 36.0 36.0 36.0 36.0 22 34.95606622898437 36.0 36.0 36.0 32.0 36.0 23 34.915003094812356 36.0 36.0 36.0 32.0 36.0 24 34.90097790780104 36.0 36.0 36.0 32.0 36.0 25 34.872930840201875 36.0 36.0 36.0 32.0 36.0 26 34.83155293451694 36.0 36.0 36.0 32.0 36.0 27 34.82142932718251 36.0 36.0 36.0 32.0 36.0 28 34.797934543396146 36.0 36.0 36.0 32.0 36.0 29 34.77096470855861 36.0 36.0 36.0 32.0 36.0 30 34.75043248018791 36.0 36.0 36.0 32.0 36.0 31 34.742598240453695 36.0 36.0 36.0 32.0 36.0 32 34.70203305365399 36.0 36.0 36.0 32.0 36.0 33 34.67465917387026 36.0 36.0 36.0 32.0 36.0 34 34.65271311883021 36.0 36.0 36.0 32.0 36.0 35 34.61195880460889 36.0 36.0 36.0 32.0 36.0 36 34.5870859035265 36.0 36.0 36.0 32.0 36.0 37 34.566564916995546 36.0 36.0 36.0 32.0 36.0 38 34.51932339995556 36.0 36.0 36.0 32.0 36.0 39 34.47928591833928 36.0 36.0 36.0 32.0 36.0 40 34.451060965158234 36.0 36.0 36.0 32.0 36.0 41 34.438162607260374 36.0 36.0 36.0 32.0 36.0 42 34.36429181699872 36.0 36.0 36.0 32.0 36.0 43 34.369237565202674 36.0 36.0 36.0 32.0 36.0 44 34.33814660417085 36.0 36.0 36.0 32.0 36.0 45 34.25542980859776 36.0 36.0 36.0 32.0 36.0 46 34.266692148170094 36.0 36.0 36.0 32.0 36.0 47 34.23777020092474 36.0 36.0 36.0 32.0 36.0 48 34.19043412017395 36.0 36.0 36.0 32.0 36.0 49 34.18691145662501 36.0 36.0 36.0 32.0 36.0 50 33.59978058573953 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 7.0 21 30.0 22 134.0 23 371.0 24 959.0 25 2406.0 26 4921.0 27 9629.0 28 16801.0 29 25906.0 30 38503.0 31 56062.0 32 83285.0 33 132492.0 34 277635.0 35 863065.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.12214053476332 18.119161690903944 11.606842875245702 26.151854899087034 2 15.660034850924673 21.320367290390205 37.091369601661206 25.928228257023918 3 18.908077331296557 25.110782670224406 28.707607153839287 27.273532844639746 4 12.298935857860448 16.32808800928975 36.768451875540606 34.6045242573092 5 13.872760890036293 37.2413715573519 33.84428597124205 15.041581581369758 6 33.02371902203671 36.14472650515407 17.322133786182288 13.509420686626935 7 28.97842095796345 30.964258885021106 21.461531746955444 18.595788410059992 8 27.70848983737687 33.14577095214415 20.36479108694042 18.78094812353856 9 27.49079491710135 14.270457503200618 18.72288732766921 39.51586025202882 10 15.307418027149705 27.482264344587513 32.58652248896977 24.623795139293005 11 37.058063441008116 21.66018166813031 22.2180414334536 19.063713457407978 12 23.70289007861352 24.32092675081735 29.790809200850678 22.18537396971845 13 29.806018748743558 20.081364468380013 25.45886544708135 24.653751335795075 14 23.27265825865225 19.955257477807287 25.728867986414567 31.043216277125897 15 25.00634833303355 27.226148783765197 23.541073714727073 24.22642916847418 16 25.274036375948285 26.259416693999764 24.73429581115825 23.732251118893696 17 23.380712177160813 25.987430300593566 26.363304518955065 24.268553003290553 18 24.279860971506565 25.291097520975953 27.465269328028945 22.963772179488537 19 24.788653412758034 26.105601874874356 25.847700845386353 23.25804386698126 20 24.707117010358363 24.870057558219504 26.742154518426037 23.680670912996096 21 25.910324505623567 25.18985483478463 24.748050532730947 24.151770126860857 22 24.503507454001035 25.735150190979017 25.689124776485773 24.07221757853417 23 23.83951149577307 25.077767079661 25.831565498926075 25.251155925639857 24 23.63100843270238 26.311393670711965 25.807825378519354 24.249772518066298 25 24.510583200194684 25.22649000666575 25.650042851247978 24.612883941891592 26 23.403989398283834 25.89954556516035 26.425994307661384 24.270470728894438 27 24.877794589104145 25.774099859278614 25.792681959095574 23.555423592521663 28 23.7445510141462 25.437572080031316 26.24599261477257 24.57188429104991 29 23.610111836466942 25.900339106789545 26.319130701596606 24.17041835514691 30 24.191579465258748 25.854842720049092 26.3590061684636 23.59457164622856 31 23.799437643498777 25.85649593177658 25.648918667273286 24.695147757451355 32 23.787203876715374 26.077166633161575 25.72999217038926 24.405637319733795 33 23.586107202183825 25.432612444848857 26.078687587950867 24.902592765016454 34 23.701236866886035 26.190312443790802 26.5140113000328 23.59443938929036 35 24.940021478526763 25.559050077767083 25.97823844338874 23.522690000317418 36 23.739988149778338 26.360460994783786 25.77495952937691 24.124591326060965 37 24.69223810481098 25.921037317617685 25.66234274650048 23.724381831070858 38 23.79494090760001 25.92659210902204 25.76047739464412 24.517989588733823 39 24.187810142520078 25.67708939510967 25.89551172854528 24.239588733824977 40 24.760152042576152 25.794004528477565 25.70526012294605 23.740583306000232 41 23.361931691936558 26.007268841323416 26.585562303598447 24.04523716314158 42 24.946303683091216 26.237924941542435 25.74797911398432 23.06779226138203 43 24.046691989461767 25.02420301969041 25.984190005607694 24.94491498524013 44 23.606673156073768 25.69944081766529 26.368528668013923 24.32535735824701 45 24.025001851597136 25.92156634537048 26.001714049919062 24.051717753113326 46 23.61588063009892 25.431901849416118 26.292630572401794 24.659586948083163 47 24.056214489012092 25.1678340545745 26.562417339413624 24.213534116999778 48 23.940754181964387 26.719075682710315 25.45026874609842 23.88990138922688 49 23.15852052098653 25.782233660977855 26.742485160771533 24.31676065726408 50 23.227095743442703 26.79214764106525 25.273837990540983 24.706918624951065 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 24.5 2 28.0 3 103.5 4 179.0 5 190.5 6 202.0 7 232.0 8 262.0 9 355.0 10 448.0 11 658.0 12 868.0 13 1434.5 14 2001.0 15 2904.0 16 3807.0 17 4674.0 18 5541.0 19 6370.5 20 7200.0 21 8384.5 22 9569.0 23 10578.5 24 11588.0 25 12761.5 26 13935.0 27 16956.0 28 19977.0 29 23304.5 30 26632.0 31 29189.5 32 31747.0 33 35973.0 34 40199.0 35 45679.0 36 51159.0 37 57520.5 38 63882.0 39 68007.0 40 72132.0 41 77295.5 42 82459.0 43 85379.0 44 88299.0 45 97577.0 46 106855.0 47 113774.5 48 120694.0 49 119423.5 50 118153.0 51 110434.5 52 102716.0 53 98362.0 54 94008.0 55 93013.5 56 92019.0 57 88625.0 58 85231.0 59 77151.5 60 69072.0 61 60879.0 62 52686.0 63 46095.0 64 39504.0 65 33853.5 66 28203.0 67 25112.5 68 22022.0 69 19986.0 70 17950.0 71 14198.5 72 10447.0 73 9172.0 74 7897.0 75 6025.5 76 4154.0 77 3638.5 78 3123.0 79 2704.5 80 2286.0 81 1789.0 82 1292.0 83 1094.5 84 897.0 85 709.0 86 521.0 87 381.5 88 242.0 89 152.5 90 63.0 91 42.5 92 22.0 93 14.5 94 7.0 95 6.0 96 5.0 97 3.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014019235449091661 2 0.0035048088622729153 3 8.596700982933565E-4 4 2.6451387639795585E-4 5 0.0 6 2.6451387639795585E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.612846909948896E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1512208.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.828962664289186 #Duplication Level Percentage of deduplicated Percentage of total 1 77.66842656447486 44.91484539991103 2 14.064549897303042 16.266766618023397 3 4.098178206683626 7.10980183517733 4 1.6242942407897178 3.757250040257941 5 0.7812247876053333 2.2588709537423037 6 0.4321664901899954 1.4995043895572486 7 0.2475660956922785 1.0021543353312834 8 0.16563028115143333 0.7662581875825567 9 0.11614739259248938 0.6045014906807046 >10 0.6538945028428661 7.131158146773211 >50 0.07243671706818079 2.945970539967545 >100 0.06824665015736264 7.99858908563895 >500 0.005399907176098889 2.081053875874132 >1k 0.0018382662727145153 1.663275101482441 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4530 0.299561965020685 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3536 0.233830266735793 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1710 0.11307968216012614 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1672 0.11056680033434554 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.612846909948896E-5 0.0 5 0.0 0.0 0.0 6.612846909948896E-5 6.612846909948896E-5 6 0.0 0.0 0.0 1.3225693819897793E-4 6.612846909948896E-5 7 0.0 0.0 0.0 1.3225693819897793E-4 6.612846909948896E-5 8 0.0 0.0 0.0 1.3225693819897793E-4 6.612846909948896E-5 9 0.0 0.0 0.0 1.9838540729846688E-4 6.612846909948896E-5 10 0.0 0.0 0.0 1.9838540729846688E-4 6.612846909948896E-5 11 0.0 0.0 0.0 1.9838540729846688E-4 6.612846909948896E-5 12 0.0 0.0 0.0 1.9838540729846688E-4 1.3225693819897793E-4 13 0.0 0.0 0.0 1.9838540729846688E-4 1.9838540729846688E-4 14 0.0 0.0 0.0 1.9838540729846688E-4 1.9838540729846688E-4 15 0.0 0.0 0.0 2.6451387639795585E-4 2.6451387639795585E-4 16 1.3225693819897793E-4 0.0 0.0 2.6451387639795585E-4 2.6451387639795585E-4 17 1.3225693819897793E-4 0.0 0.0 3.306423454974448E-4 2.6451387639795585E-4 18 1.3225693819897793E-4 0.0 0.0 3.306423454974448E-4 2.6451387639795585E-4 19 1.3225693819897793E-4 0.0 0.0 5.290277527959117E-4 2.6451387639795585E-4 20 1.3225693819897793E-4 0.0 0.0 5.290277527959117E-4 3.9677081459693375E-4 21 1.3225693819897793E-4 0.0 0.0 5.951562218954006E-4 3.9677081459693375E-4 22 1.3225693819897793E-4 0.0 0.0 0.0011903124437908012 3.9677081459693375E-4 23 1.3225693819897793E-4 0.0 0.0 0.001587083258387735 3.9677081459693375E-4 24 1.9838540729846688E-4 0.0 0.0 0.002909652640377514 3.9677081459693375E-4 25 1.9838540729846688E-4 0.0 0.0 0.003438680393173426 3.9677081459693375E-4 26 1.9838540729846688E-4 0.0 0.0 0.004959635182461672 3.9677081459693375E-4 27 1.9838540729846688E-4 0.0 0.0 0.00634833303355094 3.9677081459693375E-4 28 1.9838540729846688E-4 0.0 0.0 0.010051527303122322 3.9677081459693375E-4 29 1.9838540729846688E-4 0.0 0.0 0.02023531154444362 3.9677081459693375E-4 30 1.9838540729846688E-4 0.0 0.0 0.03928031064509644 3.9677081459693375E-4 31 1.9838540729846688E-4 0.0 0.0 0.08226381555976427 4.628992836964227E-4 32 1.9838540729846688E-4 0.0 0.0 0.13695205950504163 4.628992836964227E-4 33 1.9838540729846688E-4 0.0 0.0 0.18661453979875783 4.628992836964227E-4 34 2.6451387639795585E-4 0.0 0.0 0.24837852993768053 4.628992836964227E-4 35 2.6451387639795585E-4 0.0 0.0 0.3192021203432332 4.628992836964227E-4 36 2.6451387639795585E-4 0.0 0.0 0.4206431919418493 4.628992836964227E-4 37 2.6451387639795585E-4 0.0 0.0 0.5785579761514289 4.628992836964227E-4 38 2.6451387639795585E-4 0.0 0.0 0.7824320463851534 4.628992836964227E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 300 0.0 21.26718 4 TATACCG 80 8.988811E-5 19.250463 5 AGGACGT 365 0.0 17.479874 5 CCGTCGT 260 0.0 16.922924 9 CGTCGTA 225 1.8189894E-12 16.622074 10 TGGCGAG 450 0.0 16.133188 18 TATGGCG 410 0.0 16.097414 16 GACGTGA 260 0.0 16.076778 7 CTACGAC 375 0.0 15.840381 4 TACGACG 375 0.0 15.840381 5 ATAACGC 445 0.0 15.821128 3 GGACGTG 405 0.0 15.753465 6 GATATAC 490 0.0 15.716222 1 TAGAACA 770 0.0 15.7146635 4 AGACCGT 140 1.5863734E-6 15.714663 6 TAGCGGC 435 0.0 15.67802 30 GACGGTA 380 0.0 15.631438 8 ATACACT 510 0.0 15.529786 4 CGTATTG 455 0.0 15.472387 27 ACGGTAT 385 0.0 15.4284315 9 >>END_MODULE