##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062669_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1185315 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.180409427029947 32.0 32.0 32.0 32.0 32.0 2 31.386908965127414 32.0 32.0 32.0 32.0 32.0 3 31.48906661942184 32.0 32.0 32.0 32.0 32.0 4 31.59750614815471 32.0 32.0 32.0 32.0 32.0 5 31.542298038917924 32.0 32.0 32.0 32.0 32.0 6 35.09621577386602 36.0 36.0 36.0 36.0 36.0 7 35.10970585878015 36.0 36.0 36.0 36.0 36.0 8 35.060232933861464 36.0 36.0 36.0 36.0 36.0 9 35.17066265085652 36.0 36.0 36.0 36.0 36.0 10 35.07532512454495 36.0 36.0 36.0 36.0 36.0 11 35.185598764885285 36.0 36.0 36.0 36.0 36.0 12 35.09469212825283 36.0 36.0 36.0 36.0 36.0 13 35.14605400252253 36.0 36.0 36.0 36.0 36.0 14 35.09961571396633 36.0 36.0 36.0 36.0 36.0 15 35.075012971235495 36.0 36.0 36.0 36.0 36.0 16 35.07102247081999 36.0 36.0 36.0 36.0 36.0 17 35.045553291741015 36.0 36.0 36.0 36.0 36.0 18 35.057672433066315 36.0 36.0 36.0 36.0 36.0 19 35.029312039415686 36.0 36.0 36.0 36.0 36.0 20 35.00411704905447 36.0 36.0 36.0 36.0 36.0 21 34.97498386504853 36.0 36.0 36.0 36.0 36.0 22 34.94744856852398 36.0 36.0 36.0 36.0 36.0 23 34.8817284856768 36.0 36.0 36.0 32.0 36.0 24 34.852973260272584 36.0 36.0 36.0 32.0 36.0 25 34.82449559821651 36.0 36.0 36.0 32.0 36.0 26 34.77466243150555 36.0 36.0 36.0 32.0 36.0 27 34.73264828336771 36.0 36.0 36.0 32.0 36.0 28 34.68618890337168 36.0 36.0 36.0 32.0 36.0 29 34.65127919582558 36.0 36.0 36.0 32.0 36.0 30 34.616725511783784 36.0 36.0 36.0 32.0 36.0 31 34.59930229517048 36.0 36.0 36.0 32.0 36.0 32 34.55026385391225 36.0 36.0 36.0 32.0 36.0 33 34.512778459734335 36.0 36.0 36.0 32.0 36.0 34 34.480200621775644 36.0 36.0 36.0 32.0 36.0 35 34.398824784972774 36.0 36.0 36.0 32.0 36.0 36 34.345372327187285 36.0 36.0 36.0 32.0 36.0 37 34.28543045519545 36.0 36.0 36.0 32.0 36.0 38 34.215354568194954 36.0 36.0 36.0 32.0 36.0 39 34.0760067998802 36.0 36.0 36.0 32.0 36.0 40 34.00329617021636 36.0 36.0 36.0 32.0 36.0 41 33.985346511264936 36.0 36.0 36.0 32.0 36.0 42 33.853827885414425 36.0 36.0 36.0 32.0 36.0 43 33.8757494843143 36.0 36.0 36.0 32.0 36.0 44 33.8481585063886 36.0 36.0 36.0 32.0 36.0 45 33.65307871747173 36.0 36.0 36.0 27.0 36.0 46 33.716264452909144 36.0 36.0 36.0 27.0 36.0 47 33.63274319484694 36.0 36.0 36.0 21.0 36.0 48 33.59531263841257 36.0 36.0 36.0 21.0 36.0 49 33.61625306353164 36.0 36.0 36.0 21.0 36.0 50 33.05970396055057 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 13.0 21 52.0 22 206.0 23 538.0 24 1363.0 25 3094.0 26 6245.0 27 11491.0 28 18617.0 29 26857.0 30 36294.0 31 48817.0 32 70230.0 33 98021.0 34 198168.0 35 665305.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.97992552759723 19.72582072789897 12.953861030412517 24.340392714091283 2 14.136163642729684 21.73615183102513 39.460964425676956 24.666720100568227 3 18.251052259035 26.76825497529332 29.403437252964842 25.577255512706838 4 10.887531531835554 17.729623474027893 38.273025621989184 33.10981937214737 5 12.123612710545299 39.21472351231529 34.465353091794164 14.196310685345246 6 31.09838869020652 37.65878770852157 18.24081315505071 13.002010446221195 7 28.03586222722418 32.68686609624116 21.522820113488915 17.75445156304574 8 26.96380287096679 34.390351931764975 20.384960959744877 18.26088423752336 9 26.81295689331528 15.70038344237608 20.05795927664798 37.42870038766066 10 15.914925568308846 27.024040023116218 32.37628815968751 24.684746248887425 11 34.718281638214314 22.790988049590194 23.561416163635826 18.929314148559666 12 23.900144687277223 26.07981844488596 29.428548529293902 20.591488338542916 13 28.468297456794183 20.990285282815115 26.703112674689848 23.838304585700847 14 22.824481256037423 22.313393486119722 25.835410840156413 29.02671441768644 15 24.4809185743874 28.67811510020543 24.781682506337976 22.059283819069194 16 24.4215250798311 26.99603059102433 26.47726553700915 22.105178792135423 17 21.849972370213823 27.38326942627065 27.7047029692529 23.062055234262623 18 23.358600878247554 24.950245293445203 30.401201368412618 21.289952459894625 19 23.645022631114937 27.700231584009316 27.126966249477984 21.527779535397766 20 23.508518832546624 25.45146226952329 29.021821203646287 22.0181976942838 21 24.951510779834894 25.880968350185395 25.380679397459748 23.786841472519964 22 23.276934823232644 27.502731341457753 26.485786478699758 22.734547356609845 23 21.740043785829084 26.934781049763146 27.18770959618329 24.13746556822448 24 22.4007120470086 28.10974297971425 26.947267182141456 22.54227779113569 25 23.548339470942324 26.135415480273178 26.933093734576886 23.383151314207616 26 20.91199385817272 27.07086301953489 29.06746307943458 22.949680042857807 27 23.65674947165943 27.4664540649532 27.00075507354585 21.876041389841518 28 21.90607560015692 26.13727152697806 28.128725275559663 23.827927597305358 29 21.81614170072934 26.690795273830165 28.563462033299164 22.92960099214133 30 23.231461678962976 25.965840304054193 28.84414691453327 21.95855110244956 31 22.734969185406413 25.86519195319388 27.361165597330668 24.038673264069043 32 21.556042064767595 27.374917216098677 27.735412105642805 23.333628613490927 33 21.442738850010336 26.86695097927555 28.07388753200626 23.616422638707853 34 21.730594820786038 27.140127307930804 29.454701914680907 21.674575956602254 35 24.075288003610854 26.7106212272687 27.480796244036394 21.733294525084048 36 21.897217195429064 27.15843467770171 27.894104098910415 23.050244027958815 37 24.24663486077541 26.79363713443262 26.483677334716933 22.476050670075043 38 22.320564575661322 27.29493847627002 26.832107920679316 23.552389027389346 39 22.658365075950275 26.93790258285772 26.838604084146407 23.565128257045593 40 23.877534663781358 26.944061283287564 27.121229377844706 22.05717467508637 41 22.077253725802844 26.812872527555964 28.534187114817577 22.575686631823608 42 24.23001480619076 28.051277508510395 26.89571970320126 20.822987982097587 43 22.545230592711643 26.515651957496527 26.957391073259007 23.98172637653282 44 22.202030683826663 26.732809421968 28.201279828568776 22.86388006563656 45 22.97490540489237 27.1342217047789 27.423849356500167 22.46702353382856 46 22.850335734105677 26.106943904268327 27.784053663462732 23.258666698163267 47 24.037998337994544 25.831108186431457 27.780041592319343 22.350851883254663 48 22.82203464901735 29.17764476109726 25.42665873628529 22.573661853600097 49 21.87781307078709 26.859526792456013 28.533512188743078 22.72914794801382 50 21.147307801983274 29.336024040887054 25.63253281408977 23.8841353430399 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 59.0 1 51.0 2 43.0 3 241.0 4 439.0 5 418.5 6 398.0 7 375.0 8 352.0 9 468.5 10 585.0 11 866.5 12 1148.0 13 2116.0 14 3084.0 15 4147.0 16 5210.0 17 6294.5 18 7379.0 19 7596.5 20 7814.0 21 8840.5 22 9867.0 23 10133.5 24 10400.0 25 13041.5 26 15683.0 27 20783.0 28 25883.0 29 29278.0 30 32673.0 31 32986.5 32 33300.0 33 38575.5 34 43851.0 35 50394.0 36 56937.0 37 65762.0 38 74587.0 39 72540.5 40 70494.0 41 72591.0 42 74688.0 43 69775.5 44 64863.0 45 73423.5 46 81984.0 47 88092.5 48 94201.0 49 89215.0 50 84229.0 51 72563.5 52 60898.0 53 56184.0 54 51470.0 55 52254.0 56 53038.0 57 53070.0 58 53102.0 59 47908.0 60 42714.0 61 37437.0 62 32160.0 63 28537.5 64 24915.0 65 21717.0 66 18519.0 67 17036.0 68 15553.0 69 14664.5 70 13776.0 71 10287.0 72 6798.0 73 5893.0 74 4988.0 75 3561.5 76 2135.0 77 1960.0 78 1785.0 79 1538.0 80 1291.0 81 991.5 82 692.0 83 657.0 84 622.0 85 519.5 86 417.0 87 305.5 88 194.0 89 121.5 90 49.0 91 36.5 92 24.0 93 17.0 94 10.0 95 6.5 96 3.0 97 4.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015017105157700696 2 0.004218287965646263 3 6.74926074503402E-4 4 4.218287965646263E-4 5 0.0 6 5.061945558775515E-4 7 8.436575931292525E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.687315186258505E-4 47 0.0 48 0.0 49 0.0 50 8.436575931292525E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1185315.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.01270438233227 #Duplication Level Percentage of deduplicated Percentage of total 1 77.45418299163521 31.76605510211002 2 13.102963399900561 10.747759289052821 3 4.00307247088304 4.925304836081355 4 1.6809504494536485 2.7576129545916417 5 0.8440102900031051 1.730757225977194 6 0.5206846221429724 1.2812810690625662 7 0.3331324203583232 0.9563863033428729 8 0.24717185394935712 0.8109748942126391 9 0.18972870950014253 0.7003158728013668 >10 1.2047405079034847 9.88979147478771 >50 0.18953444423297594 5.4455080034524554 >100 0.19717244561007954 16.781593151313814 >500 0.023768166829880963 6.728047512936465 >1k 0.008680547885695656 4.999351344480866 >5k 2.0667971156418228E-4 0.47926096579621247 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5654 0.4770040031552794 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4542 0.38318927879930653 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 2476 0.20888962005880296 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1980 0.167044203439592 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 1905 0.16071677149112262 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1752 0.14780881031624504 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1519 0.12815158839633345 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1507 0.12713919928457837 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 1501 0.12663300472870082 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1466 0.12368020315274844 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1464 0.12351147163412257 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 1450 0.12233035100374162 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1420 0.11979937822435387 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1416 0.11946191518710217 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 1383 0.11667784512977564 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGTAACAAGAATTCC 1378 0.116256016333211 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1362 0.1149061641842042 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1355 0.11431560386901372 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 1352 0.11406250659107495 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1295 0.1092536583102382 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1274 0.10748197736466679 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 1258 0.10613212521565997 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1249 0.10537283338184365 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1239 0.1045291757887144 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1229 0.10368551819558514 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1224 0.10326368939902052 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTATTATTATATTTC 1220 0.10292622636176882 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1218 0.10275749484314296 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 8.436575931292526E-5 0.0 10 0.0 0.0 0.0 8.436575931292526E-5 0.0 11 0.0 0.0 0.0 8.436575931292526E-5 0.0 12 0.0 0.0 0.0 1.6873151862585053E-4 0.0 13 0.0 0.0 0.0 1.6873151862585053E-4 0.0 14 0.0 0.0 0.0 1.6873151862585053E-4 0.0 15 0.0 0.0 0.0 2.5309727793877576E-4 0.0 16 0.0 0.0 0.0 4.218287965646263E-4 0.0 17 0.0 0.0 0.0 4.218287965646263E-4 0.0 18 0.0 0.0 0.0 6.749260745034021E-4 0.0 19 0.0 0.0 0.0 6.749260745034021E-4 0.0 20 0.0 0.0 0.0 9.280233524421778E-4 0.0 21 0.0 0.0 0.0 0.0015185836676326547 0.0 22 0.0 0.0 0.0 0.0026997042980136084 0.0 23 0.0 0.0 0.0 0.005230677077401366 0.0 24 0.0 0.0 0.0 0.007930381375414974 0.0 25 0.0 0.0 0.0 0.00995515959892518 0.0 26 0.0 0.0 0.0 0.012992326934190489 0.0 27 0.0 0.0 0.0 0.0163669573067075 0.0 28 0.0 0.0 0.0 0.02345368108899322 0.0 29 0.0 0.0 0.0 0.03324010916929255 0.0 30 0.0 0.0 0.0 0.048172848567680324 0.0 31 0.0 0.0 0.0 0.08824658424131981 0.0 32 0.0 0.0 0.0 0.13304480243648312 0.0 33 0.0 0.0 0.0 0.1677191295140954 0.0 34 0.0 0.0 0.0 0.21555451504452403 0.0 35 0.0 0.0 0.0 0.27039225859792543 0.0 36 0.0 0.0 0.0 0.3504553641858915 0.0 37 0.0 0.0 0.0 0.4625774583127692 0.0 38 0.0 0.0 0.0 0.5989125253624564 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGCCG 30 0.0057450766 29.33322 5 TAGCGAG 40 7.0322066E-4 27.499895 18 TCGTATA 50 8.3415136E-5 26.399899 44 TGGTATA 380 0.0 22.578861 44 AGACCGT 60 2.8728065E-4 21.999916 6 GATATAC 440 0.0 21.503546 1 GTTATAT 295 0.0 20.8848 1 GCGAGAA 815 0.0 20.515259 20 TGTAGGA 1215 0.0 20.460827 2 ATAGCGA 55 0.004483661 19.999924 17 GTCCGAC 55 0.004483661 19.999924 12 AGGACCT 895 0.0 19.910536 5 GGCGAGA 850 0.0 19.670513 19 TAGGACG 1225 0.0 19.575436 4 GTCGTAT 90 1.0019661E-5 19.555481 43 TAGGACC 1060 0.0 19.509357 4 TTAGGAC 715 0.0 19.38454 3 ACGCTTA 125 2.2879249E-8 19.359924 17 CGCTTAC 125 2.2879249E-8 19.359924 18 CTGTAGG 1160 0.0 19.348019 1 >>END_MODULE