##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062668_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2082543 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206616622081754 32.0 32.0 32.0 32.0 32.0 2 31.34322844714371 32.0 32.0 32.0 32.0 32.0 3 31.47259240265387 32.0 32.0 32.0 32.0 32.0 4 31.594941857142924 32.0 32.0 32.0 32.0 32.0 5 31.514359607460687 32.0 32.0 32.0 32.0 32.0 6 35.119418422572785 36.0 36.0 36.0 36.0 36.0 7 35.13695803640069 36.0 36.0 36.0 36.0 36.0 8 35.07253631737736 36.0 36.0 36.0 36.0 36.0 9 35.21435811889599 36.0 36.0 36.0 36.0 36.0 10 35.08564144894007 36.0 36.0 36.0 36.0 36.0 11 35.22785988092443 36.0 36.0 36.0 36.0 36.0 12 35.131316376180465 36.0 36.0 36.0 36.0 36.0 13 35.17246750727356 36.0 36.0 36.0 36.0 36.0 14 35.131215537926465 36.0 36.0 36.0 36.0 36.0 15 35.09146941983911 36.0 36.0 36.0 36.0 36.0 16 35.10372991097903 36.0 36.0 36.0 36.0 36.0 17 35.079083601154935 36.0 36.0 36.0 36.0 36.0 18 35.085662096773035 36.0 36.0 36.0 36.0 36.0 19 35.071098171802454 36.0 36.0 36.0 36.0 36.0 20 35.056338332509824 36.0 36.0 36.0 36.0 36.0 21 35.04254269899829 36.0 36.0 36.0 36.0 36.0 22 35.021836283812625 36.0 36.0 36.0 36.0 36.0 23 34.96731592096778 36.0 36.0 36.0 36.0 36.0 24 34.946221518595294 36.0 36.0 36.0 32.0 36.0 25 34.90899203521848 36.0 36.0 36.0 32.0 36.0 26 34.85652349075145 36.0 36.0 36.0 32.0 36.0 27 34.82927411342767 36.0 36.0 36.0 32.0 36.0 28 34.80635357829346 36.0 36.0 36.0 32.0 36.0 29 34.771696910940136 36.0 36.0 36.0 32.0 36.0 30 34.75732842010945 36.0 36.0 36.0 32.0 36.0 31 34.746171867759756 36.0 36.0 36.0 32.0 36.0 32 34.70093006482939 36.0 36.0 36.0 32.0 36.0 33 34.67501127227625 36.0 36.0 36.0 32.0 36.0 34 34.652502253254795 36.0 36.0 36.0 32.0 36.0 35 34.60276354437819 36.0 36.0 36.0 32.0 36.0 36 34.566006080066536 36.0 36.0 36.0 32.0 36.0 37 34.532160920566824 36.0 36.0 36.0 32.0 36.0 38 34.481942509710485 36.0 36.0 36.0 32.0 36.0 39 34.41658731656441 36.0 36.0 36.0 32.0 36.0 40 34.374320242127055 36.0 36.0 36.0 32.0 36.0 41 34.354850296008294 36.0 36.0 36.0 32.0 36.0 42 34.25935887038107 36.0 36.0 36.0 32.0 36.0 43 34.281223004759084 36.0 36.0 36.0 32.0 36.0 44 34.26283298832245 36.0 36.0 36.0 32.0 36.0 45 34.14602147470664 36.0 36.0 36.0 32.0 36.0 46 34.19981580212269 36.0 36.0 36.0 32.0 36.0 47 34.133351868364784 36.0 36.0 36.0 32.0 36.0 48 34.11334171731388 36.0 36.0 36.0 32.0 36.0 49 34.126473258895494 36.0 36.0 36.0 32.0 36.0 50 33.5818621752348 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 13.0 21 50.0 22 192.0 23 589.0 24 1681.0 25 4006.0 26 8364.0 27 16059.0 28 25734.0 29 36742.0 30 51646.0 31 73097.0 32 108002.0 33 166586.0 34 366133.0 35 1223643.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.56501067134375 17.818982889350362 11.64449153112171 25.97151490818418 2 15.63891830114792 20.585748139824677 37.224203047830336 26.55113051119707 3 18.682078004894034 24.57729422204466 28.576456781539434 28.164170991521875 4 12.086027763252225 15.904927499487403 36.42864448506798 35.5804002521924 5 13.898632585257541 37.19337367823858 33.84155813349352 15.066435603010358 6 34.197649784012924 35.420248044207725 16.974769175215553 13.407332996563797 7 29.8010653321444 30.776651430486666 21.10938405593546 18.31289918143347 8 28.16724552626284 33.1425569604085 19.75551045044448 18.934687062884176 9 27.14714654151199 14.405704948229161 18.590444471014525 39.85670403924433 10 15.291833109808536 27.3466142115673 32.43198339722157 24.929569281402593 11 37.11039820066141 21.349667209752692 21.841565816408114 19.698368773177794 12 23.811705208487894 24.18360629288327 29.416535456890923 22.58815304173791 13 29.70786197451865 19.743938060342572 25.40643818639039 25.141761778748382 14 23.357933065487725 19.66014627309016 25.71951695595241 31.262403705469705 15 25.246537526476043 27.142776883838653 23.16806903867051 24.442616551014794 16 25.667609264250483 26.023088118708714 24.412653184111925 23.896649432928875 17 23.719702306266903 26.1852936530002 26.029714632542998 24.06528940818989 18 24.8487066053378 24.822152531784457 27.176053507658665 23.153087355219075 19 24.882847557049242 26.35700679409741 25.634572731511422 23.125572917341923 20 24.735527669776808 24.46845035132528 26.74302523405279 24.052996744845125 21 25.87403957565342 25.042556144098825 24.733318831832044 24.35008544841571 22 24.587679582126277 25.34238188599227 25.539208554157106 24.53072997772435 23 23.506117280651587 24.961069231223558 25.795049610020058 25.737763878104797 24 23.75115423787168 26.21741783963164 25.580936384026643 24.450491538470036 25 24.717904984434895 24.957852010738794 25.302862894067495 25.021380110758816 26 23.794610723524077 25.52619561756948 26.10534332304303 24.573850335863412 27 25.11890510784171 25.63759787913143 25.307712733902733 23.935784279124128 28 24.151290033387067 24.816006200112074 26.135162635297327 24.897541131203532 29 23.793362249903126 25.758747838580042 26.38164013900313 24.0662497725137 30 24.609047688331046 25.21585388633032 26.405889338179335 23.769209087159304 31 24.12151873934896 25.479906057161845 25.45191143712279 24.94666376636641 32 23.915232482594597 25.593421120236172 25.61282047957713 24.8785259175921 33 23.628035531559252 25.14104150550553 25.971516554520125 25.259406408415096 34 23.945387922362226 25.664103934468578 26.46053406820411 23.92997407496508 35 25.167931706572205 25.20456960552555 25.905731598339145 23.721767089563098 36 24.141446299068015 25.903714833259144 25.67678074354287 24.27805812412997 37 25.155687061443626 25.544538576154252 25.575414289164737 23.72436007323738 38 24.0642330074337 25.50353101952757 25.66122284149715 24.77101313154158 39 24.4693626974329 25.35928429809132 25.62300034140952 24.54835266306626 40 24.81951152989398 25.45426432971612 25.6018723262857 24.124351814104198 41 23.549621784520173 25.762061095497184 26.314942836714533 24.373374283268102 42 25.249370601231284 25.778291252569574 25.730465109243845 23.241873036955297 43 24.406987034601446 24.633248869291055 25.630635237783807 25.329128858323696 44 24.08272002066704 25.26660914084367 26.19384089548211 24.45682994300718 45 24.409676054708115 25.520337395194243 25.665880608467628 24.404105941630018 46 23.805988747389605 25.37138560190229 26.257947630272472 24.564678020435633 47 24.35038525033349 24.85755389327082 26.544098510378184 24.247962346017513 48 24.556515759818645 26.551096423939384 24.9906484523969 23.901739363845067 49 23.571758182183995 25.733826384377178 26.381688157219322 24.312727276219505 50 23.507953260966648 26.732330008230328 25.001368519818566 24.758348210984458 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 32.0 2 44.0 3 164.0 4 284.0 5 339.0 6 394.0 7 356.5 8 319.0 9 459.0 10 599.0 11 872.0 12 1145.0 13 2005.5 14 2866.0 15 3955.5 16 5045.0 17 5874.0 18 6703.0 19 7482.0 20 8261.0 21 9650.0 22 11039.0 23 12237.5 24 13436.0 25 15022.0 26 16608.0 27 19851.0 28 23094.0 29 26480.5 30 29867.0 31 33323.5 32 36780.0 33 42767.0 34 48754.0 35 55498.5 36 62243.0 37 72595.0 38 82947.0 39 89636.0 40 96325.0 41 105769.5 42 115214.0 43 120388.5 44 125563.0 45 139195.0 46 152827.0 47 163185.5 48 173544.0 49 172263.5 50 170983.0 51 157864.0 52 144745.0 53 139833.0 54 134921.0 55 134449.5 56 133978.0 57 127574.0 58 121170.0 59 109993.5 60 98817.0 61 87138.0 62 75459.0 63 65013.5 64 54568.0 65 47049.5 66 39531.0 67 34201.5 68 28872.0 69 26609.5 70 24347.0 71 19024.5 72 13702.0 73 12393.5 74 11085.0 75 8084.0 76 5083.0 77 4645.0 78 4207.0 79 3610.0 80 3013.0 81 2377.0 82 1741.0 83 1440.5 84 1140.0 85 938.5 86 737.0 87 534.0 88 331.0 89 215.0 90 99.0 91 74.0 92 49.0 93 33.0 94 17.0 95 13.0 96 9.0 97 10.5 98 12.0 99 9.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015894029559053523 2 0.003745420862858534 3 3.361275133334582E-4 4 2.8810929714296414E-4 5 0.0 6 5.282003780954342E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.920728647619761E-4 47 4.801821619049403E-5 48 0.0 49 0.0 50 4.801821619049403E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2082543.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.607889219148305 #Duplication Level Percentage of deduplicated Percentage of total 1 75.08663417448606 40.252359666645646 2 14.689524848219405 15.749488414905443 3 4.749966476430786 7.639070299895094 4 2.036273904379298 4.366413835432321 5 1.0445964688256686 2.7999305889759984 6 0.6158274263444781 1.9807925069752799 7 0.36368243311165166 1.3647373309639819 8 0.2494286248153332 1.0697073669747914 9 0.1901142560665834 0.9172461580378377 >10 0.8278507763214337 7.864356437342261 >50 0.06739131552630212 2.554839158233864 >100 0.06718436991609601 7.736440136267418 >500 0.008553655686614025 3.2235602880611993 >1k 0.002971269870086973 2.481057811288787 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3919 0.1881833892505461 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3677 0.17656298093244654 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2108 0.1012223997295614 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.801821619049403E-5 2 0.0 0.0 0.0 0.0 4.801821619049403E-5 3 0.0 0.0 0.0 0.0 4.801821619049403E-5 4 0.0 0.0 0.0 0.0 4.801821619049403E-5 5 0.0 0.0 0.0 0.0 1.920728647619761E-4 6 0.0 0.0 0.0 0.0 1.920728647619761E-4 7 0.0 0.0 0.0 0.0 1.920728647619761E-4 8 0.0 0.0 0.0 0.0 2.4009108095247013E-4 9 0.0 0.0 0.0 0.0 2.8810929714296414E-4 10 0.0 0.0 0.0 0.0 2.8810929714296414E-4 11 0.0 0.0 0.0 1.920728647619761E-4 2.8810929714296414E-4 12 0.0 0.0 0.0 1.920728647619761E-4 4.321639457144462E-4 13 0.0 0.0 0.0 1.920728647619761E-4 5.282003780954342E-4 14 0.0 0.0 0.0 2.8810929714296414E-4 5.282003780954342E-4 15 0.0 0.0 0.0 4.321639457144462E-4 5.762185942859283E-4 16 0.0 0.0 0.0 4.8018216190494025E-4 6.242368104764223E-4 17 0.0 0.0 0.0 6.242368104764223E-4 6.242368104764223E-4 18 0.0 0.0 0.0 9.603643238098805E-4 7.202732428574104E-4 19 0.0 0.0 0.0 0.0010083825400003744 7.202732428574104E-4 20 0.0 0.0 0.0 0.0015365829180958089 8.163096752383985E-4 21 0.0 0.0 0.0 0.0022568561609532193 9.603643238098805E-4 22 0.0 0.0 0.0 0.0031211840523821116 9.603643238098805E-4 23 0.0 0.0 0.0 0.005954258807621259 0.0010083825400003744 24 0.0 0.0 0.0 0.009603643238098805 0.0010564007561908685 25 0.0 0.0 0.0 0.01157239010190906 0.0010564007561908685 26 0.0 0.0 0.0 0.01502970166762463 0.0011044189723813625 27 0.0 0.0 0.0 0.018631067881911684 0.0011044189723813625 28 0.0 0.0 0.0 0.026313982472390727 0.0011044189723813625 29 0.0 0.0 0.0 0.03827051830382374 0.0011044189723813625 30 0.0 0.0 0.0 0.060166824886689015 0.0011044189723813625 31 0.0 0.0 0.0 0.10026203540575153 0.0011044189723813625 32 0.0 0.0 0.0 0.14453483073338702 0.0011044189723813625 33 0.0 0.0 0.0 0.1889996989257845 0.0011044189723813625 34 0.0 0.0 0.0 0.249118505596283 0.0011524371885718566 35 0.0 0.0 0.0 0.3093333486991625 0.0011524371885718566 36 0.0 0.0 0.0 0.39600622892300424 0.0011524371885718566 37 0.0 0.0 0.0 0.5207095363697172 0.0011524371885718566 38 0.0 0.0 0.0 0.6749920649897745 0.0012004554047623506 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATACG 80 1.3087083E-7 24.754026 1 CGCAATA 555 0.0 24.180048 36 TATAACG 60 2.8724497E-4 22.001467 2 ATACGAA 620 0.0 21.290207 40 AATACGA 645 0.0 21.147171 39 CGGTCCA 670 0.0 21.01481 10 CAATACG 655 0.0 20.488438 38 CGAATGC 650 0.0 19.969122 43 CTAGCGG 650 0.0 19.969122 29 TACGAAT 685 0.0 19.9123 41 TCTAGCG 655 0.0 19.816687 28 GCAATAC 705 0.0 19.659468 37 TAGCGGC 675 0.0 19.229525 30 CGCCGGT 685 0.0 18.306469 7 GCGCAAT 755 0.0 17.774736 35 CCGGTCC 780 0.0 17.769135 9 TAGGACG 310 0.0 17.741838 4 TCGTATA 75 0.0012913425 17.599905 44 GGCGTTA 425 0.0 17.08226 42 CGGCGCA 995 0.0 17.025034 33 >>END_MODULE