##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062667_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 909102 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.90694773523763 32.0 32.0 32.0 32.0 32.0 2 30.397622049011 32.0 32.0 32.0 32.0 32.0 3 30.321508477596574 32.0 32.0 32.0 21.0 32.0 4 30.459670092024876 32.0 32.0 32.0 32.0 32.0 5 30.019174966065414 32.0 32.0 32.0 21.0 32.0 6 33.663927700082056 36.0 36.0 36.0 27.0 36.0 7 33.50354305677471 36.0 36.0 36.0 21.0 36.0 8 33.498625016774795 36.0 36.0 36.0 21.0 36.0 9 33.839639556397415 36.0 36.0 36.0 32.0 36.0 10 33.234155243306034 36.0 36.0 36.0 21.0 36.0 11 33.7782867049022 36.0 36.0 36.0 32.0 36.0 12 33.40405257055864 36.0 36.0 36.0 21.0 36.0 13 33.6327166808565 36.0 36.0 36.0 27.0 36.0 14 33.47287103097342 36.0 36.0 36.0 27.0 36.0 15 33.37443983183405 36.0 36.0 36.0 21.0 36.0 16 33.38107385089902 36.0 36.0 36.0 21.0 36.0 17 33.26071771924383 36.0 36.0 36.0 21.0 36.0 18 33.30846813668873 36.0 36.0 36.0 21.0 36.0 19 33.306055866118434 36.0 36.0 36.0 21.0 36.0 20 33.2861890084941 36.0 36.0 36.0 21.0 36.0 21 33.260360223605275 36.0 36.0 36.0 21.0 36.0 22 33.214225686446625 36.0 36.0 36.0 21.0 36.0 23 33.153350229127206 36.0 36.0 36.0 21.0 36.0 24 33.102232752760415 36.0 36.0 36.0 14.0 36.0 25 32.585910051897365 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 44.0 5 88.0 6 142.0 7 43.0 8 145.0 9 174.0 10 86.0 11 40.0 12 68.0 13 58.0 14 201.0 15 366.0 16 608.0 17 913.0 18 1308.0 19 1752.0 20 2380.0 21 3220.0 22 4407.0 23 5799.0 24 7943.0 25 10917.0 26 14910.0 27 18937.0 28 25674.0 29 34697.0 30 44878.0 31 61940.0 32 87841.0 33 119722.0 34 219187.0 35 240610.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.136711066520576 18.655639309492063 11.13307635102727 26.074573272960095 2 17.262678052649353 20.437237575502902 36.68635343114014 25.6137309407076 3 18.90680362880737 24.023853237248627 28.964126640845095 28.105216493098904 4 12.739266230058627 15.627568134287225 36.56077106461439 35.07239457103975 5 14.468595020406278 36.564373028282695 33.986546932236195 14.980485019074836 6 33.365979914649365 36.11489542456329 16.979780394884244 13.539344265903102 7 29.509580753956023 31.012517501607068 21.274579300992418 18.203322443444492 8 27.69430967345604 33.04368121312605 19.990840343443082 19.27116876997482 9 27.423810514749036 14.273162385257463 19.206389577958863 39.09663752203464 10 15.830799540558488 26.476913945018993 32.18535359486553 25.50693291955699 11 36.914493760730544 21.465047206122204 22.783052269781365 18.83740676336589 12 24.30406097520679 24.21925080679803 28.98877642057032 22.487911797424857 13 29.03547317760818 19.861895794099187 25.577691875640134 25.524939152652504 14 23.0939513717647 20.228504467555293 25.2070780437251 31.470466116954903 15 25.02937474465721 27.458531229730877 22.528639687785283 24.983454337826632 16 25.54521147730176 25.94032736915365 24.078943890900444 24.43551726264415 17 23.71174667646116 25.897666611967274 25.82619029001325 24.564396421558314 18 24.527757432912427 24.955421799538524 26.839325737509018 23.677495030040035 19 25.371224153084672 25.31703566967934 25.59128226252338 23.720457914712615 20 25.183256682701625 24.892843297915455 25.44261334602033 24.481286673362586 21 26.25477862743392 24.56349420507099 24.477916711180914 24.703810456314176 22 25.409185946343708 25.13488980786051 24.92746023807583 24.52846400771995 23 24.213041189079398 24.732393249194264 25.71679396207794 25.337771599648406 24 24.449427757321963 25.51240804521108 25.340806834089825 24.69735736337713 25 24.525743765061435 24.82642177745862 25.72768484538762 24.920149612092324 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 79.0 1 79.0 2 230.5 3 382.0 4 382.0 5 382.0 6 998.0 7 1614.0 8 1614.0 9 1614.0 10 1906.5 11 2199.0 12 2199.0 13 2199.0 14 2915.5 15 3632.0 16 3632.0 17 3632.0 18 5585.5 19 7539.0 20 7539.0 21 7539.0 22 12044.0 23 16549.0 24 16549.0 25 16549.0 26 24343.0 27 32137.0 28 32137.0 29 32137.0 30 39005.0 31 45873.0 32 45873.0 33 45873.0 34 55003.5 35 64134.0 36 64134.0 37 64134.0 38 70264.0 39 76394.0 40 76394.0 41 76394.0 42 84887.0 43 93380.0 44 93380.0 45 93380.0 46 104963.0 47 116546.0 48 116546.0 49 116546.0 50 115620.5 51 114695.0 52 114695.0 53 114695.0 54 105855.0 55 97015.0 56 97015.0 57 97015.0 58 88290.0 59 79565.0 60 79565.0 61 79565.0 62 71028.5 63 62492.0 64 62492.0 65 62492.0 66 52514.5 67 42537.0 68 42537.0 69 42537.0 70 32856.0 71 23175.0 72 23175.0 73 23175.0 74 18259.5 75 13344.0 76 13344.0 77 13344.0 78 10861.0 79 8378.0 80 8378.0 81 8378.0 82 6110.5 83 3843.0 84 3843.0 85 3843.0 86 2972.0 87 2101.0 88 2101.0 89 2101.0 90 1436.0 91 771.0 92 771.0 93 771.0 94 509.5 95 248.0 96 248.0 97 248.0 98 364.0 99 480.0 100 480.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009899879221473498 2 0.0034099583985075384 3 0.004729942294704004 4 0.013749832252046526 5 0.0344295799591245 6 0.04179949004622144 7 0.06753917602205253 8 0.08480896533062296 9 0.09602882844829293 10 0.1147286003110762 11 0.11692857347140365 12 0.13111840035551567 13 0.12011853455387844 14 0.12220850905618952 15 0.11098864593851955 16 0.11153863922860141 17 0.12198851174015676 18 0.12616846074477892 19 0.12759844329899175 20 0.1194585426057802 21 0.12682845269287715 22 0.14563822321367678 23 0.1363983359403015 24 0.1301284124333683 25 0.12693845135089352 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 909102.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.101475059791156 #Duplication Level Percentage of deduplicated Percentage of total 1 85.17373177249402 50.33893184101397 2 9.293666743165428 10.98538826470404 3 2.285943527965457 4.053079032184245 4 0.9552235348333715 2.2582047968192023 5 0.4945187084481632 1.4613392556974625 6 0.33064710229912014 1.1725038882074201 7 0.22161495816981608 0.9168439646205031 8 0.15340050097619287 0.7252956706083146 9 0.11687665933805454 0.6216824670245763 >10 0.7624677932673267 8.893577522281335 >50 0.1058636600229691 4.477619774659509 >100 0.10064976512612506 11.795940814722501 >500 0.005023186039173842 2.04416792695476 >1k 3.7208785475361793E-4 0.25542478050217343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1315 0.14464823529152945 No Hit GTACATGGAAGCAGTGGTATCAACG 1008 0.11087864728050317 No Hit GCGCAAGACGGACCAGAGCGAAAGC 932 0.1025187492712589 No Hit TATCAACGCAGAGTACTTTTTTTTT 921 0.1013087640330788 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.199973160327444E-4 2 0.0 0.0 0.0 0.0 2.199973160327444E-4 3 0.0 0.0 0.0 0.0 2.199973160327444E-4 4 0.0 0.0 0.0 0.0 2.199973160327444E-4 5 0.0 0.0 0.0 0.0 2.199973160327444E-4 6 0.0 0.0 0.0 0.0 2.199973160327444E-4 7 0.0 0.0 0.0 0.0 2.199973160327444E-4 8 0.0 0.0 0.0 0.0 2.199973160327444E-4 9 0.0 0.0 0.0 1.099986580163722E-4 2.199973160327444E-4 10 0.0 0.0 0.0 3.299959740491166E-4 2.199973160327444E-4 11 0.0 0.0 0.0 3.299959740491166E-4 2.199973160327444E-4 12 0.0 0.0 0.0 3.299959740491166E-4 2.199973160327444E-4 13 0.0 0.0 0.0 3.299959740491166E-4 3.299959740491166E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTGTT 55 1.1265049E-5 15.546581 14 AATCGTA 50 8.702207E-5 15.201101 13 ATCGCCA 85 1.708031E-8 14.532866 16 TACGCAG 40 0.0052820453 14.247894 5 CGAACGA 85 2.6870475E-7 13.414952 16 GCAAGAC 205 0.0 12.97155 3 GTACGAA 60 4.075243E-4 12.67177 19 TGTACGA 60 4.079032E-4 12.670374 18 ACGAACG 105 1.987246E-8 12.667583 15 AAGACGG 195 0.0 12.664795 5 TATACAC 140 5.2750693E-11 12.2104645 3 CGGTCCA 125 1.4060788E-9 12.160212 10 AGACCGT 55 0.0030663586 12.09112 6 ATATACT 55 0.0030726867 12.087791 4 CGTTATT 95 1.0434997E-6 11.9949255 2 CATTCCG 80 2.8627801E-5 11.875206 9 TTAATCC 80 2.8708562E-5 11.871938 4 CGCAAGA 185 0.0 11.805817 2 TCGCCAG 105 2.7045826E-7 11.7653475 17 GCGTTAT 105 2.729812E-7 11.75693 1 >>END_MODULE