##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062666_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 766441 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.166372884540362 32.0 32.0 32.0 32.0 32.0 2 31.371620255179458 32.0 32.0 32.0 32.0 32.0 3 31.47898403138663 32.0 32.0 32.0 32.0 32.0 4 31.591517155267006 32.0 32.0 32.0 32.0 32.0 5 31.513277603886014 32.0 32.0 32.0 32.0 32.0 6 35.09423425938852 36.0 36.0 36.0 36.0 36.0 7 35.11653212706523 36.0 36.0 36.0 36.0 36.0 8 35.05902867931126 36.0 36.0 36.0 36.0 36.0 9 35.186726701729164 36.0 36.0 36.0 36.0 36.0 10 35.05476481555658 36.0 36.0 36.0 36.0 36.0 11 35.19739027531147 36.0 36.0 36.0 36.0 36.0 12 35.1131907087434 36.0 36.0 36.0 36.0 36.0 13 35.1381998092482 36.0 36.0 36.0 36.0 36.0 14 35.09762134332584 36.0 36.0 36.0 36.0 36.0 15 35.06478907052206 36.0 36.0 36.0 36.0 36.0 16 35.078629666210446 36.0 36.0 36.0 36.0 36.0 17 35.0605108547168 36.0 36.0 36.0 36.0 36.0 18 35.066585686308535 36.0 36.0 36.0 36.0 36.0 19 35.034030016661426 36.0 36.0 36.0 36.0 36.0 20 35.0145751597318 36.0 36.0 36.0 36.0 36.0 21 34.99665988641004 36.0 36.0 36.0 36.0 36.0 22 34.98041988881075 36.0 36.0 36.0 36.0 36.0 23 34.947176625467584 36.0 36.0 36.0 32.0 36.0 24 34.92652271994844 36.0 36.0 36.0 32.0 36.0 25 34.89904245727982 36.0 36.0 36.0 32.0 36.0 26 34.86100691377418 36.0 36.0 36.0 32.0 36.0 27 34.82372028636255 36.0 36.0 36.0 32.0 36.0 28 34.80992274682591 36.0 36.0 36.0 32.0 36.0 29 34.76963262664706 36.0 36.0 36.0 32.0 36.0 30 34.75232405364535 36.0 36.0 36.0 32.0 36.0 31 34.73230946674304 36.0 36.0 36.0 32.0 36.0 32 34.6816115004286 36.0 36.0 36.0 32.0 36.0 33 34.64460930456487 36.0 36.0 36.0 32.0 36.0 34 34.614532625472805 36.0 36.0 36.0 32.0 36.0 35 34.55834826164049 36.0 36.0 36.0 32.0 36.0 36 34.52309962541148 36.0 36.0 36.0 32.0 36.0 37 34.47560999476803 36.0 36.0 36.0 32.0 36.0 38 34.43610401844369 36.0 36.0 36.0 32.0 36.0 39 34.37242005581643 36.0 36.0 36.0 32.0 36.0 40 34.34085859185508 36.0 36.0 36.0 32.0 36.0 41 34.30835902567843 36.0 36.0 36.0 32.0 36.0 42 34.23315297589769 36.0 36.0 36.0 32.0 36.0 43 34.22314568244653 36.0 36.0 36.0 32.0 36.0 44 34.182449790655774 36.0 36.0 36.0 32.0 36.0 45 34.08731396154433 36.0 36.0 36.0 32.0 36.0 46 34.091841381136966 36.0 36.0 36.0 32.0 36.0 47 34.00803192939835 36.0 36.0 36.0 32.0 36.0 48 33.97332084270022 36.0 36.0 36.0 32.0 36.0 49 33.93776820394525 36.0 36.0 36.0 32.0 36.0 50 33.41286413435607 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 12.0 21 33.0 22 76.0 23 215.0 24 642.0 25 1477.0 26 3132.0 27 6027.0 28 10109.0 29 14643.0 30 20579.0 31 28152.0 32 40664.0 33 63084.0 34 132814.0 35 444778.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.3104840972292 18.178864249986624 11.632844542634666 25.877807110149508 2 15.280813257846109 21.109761364511176 37.85482496715157 25.75460041049114 3 18.875319659725484 25.295652627733418 28.63485726214707 27.19417045039403 4 12.169641459214029 16.123636553415793 36.40219717133761 35.30452481603257 5 13.458831142905977 37.69787889739719 33.95903924763942 14.884250712057417 6 33.23317276328356 35.757453981806705 17.395973049282652 13.613400205627086 7 29.099173974252423 30.932322253115373 21.40399587182836 18.564507900803846 8 27.615824310025168 33.825565177228256 20.058295419999713 18.500315092746867 9 27.588424940732555 14.070489444066798 18.793357870990725 39.54772774420993 10 15.38944289253837 27.621173710696585 32.79691457007128 24.19246882669377 11 36.71619863759898 21.316317890091995 22.771093926342665 19.196389545966355 12 24.20812560914669 24.126449394017282 30.045626473531556 21.619798523304468 13 30.254383572903848 20.208731004734872 25.482326754440326 24.05455866792095 14 22.96823891206238 20.11374652452048 26.10259628595026 30.81541827746689 15 24.55427097454338 28.098575102323597 23.719764469802634 23.627389453330395 16 24.448457219799042 26.067890418179612 25.719005115853665 23.764647246167677 17 22.927400804497672 26.110163730802498 26.98616070904349 23.976274755656338 18 23.691582261387374 24.921683469438612 28.731500532982967 22.655233736191043 19 24.642731795402387 25.76519262408979 26.547509853987457 23.04456572652037 20 24.662433246655645 24.69257255287752 27.61112727528929 23.03386692517754 21 25.331891169705166 24.865188579420984 25.5004625274483 24.302457723425547 22 24.482510721634153 25.809031614957966 26.169007138188068 23.539450525219817 23 23.411064909105857 25.358768646249352 26.69781496553551 24.532351479109284 24 23.722504406731897 25.914453950140974 26.846945818399593 23.51609582472754 25 24.170288384885463 25.301621390296187 26.60987603742493 23.91821418739342 26 22.683154998232087 26.045709976371306 27.53806229050899 23.733072734887617 27 24.123578983900913 26.04440524450023 26.74504625926849 23.08696951233037 28 23.323256454182385 25.51729356858519 26.80845622820282 24.350993749029605 29 23.26036837799648 25.878704296873472 27.040828974441606 23.820098350688443 30 23.704499106911033 25.527992369928015 27.149513139302307 23.617995383858638 31 23.47108257517539 25.608755272747675 26.68515906638606 24.235003085690877 32 23.178039796931532 26.181923983711723 26.666762347003882 23.973273872352863 33 23.05852635754089 25.6193236009034 27.20131099458406 24.12083904697165 34 23.36566023999238 26.063193383443732 27.513533331332745 23.05761304523114 35 24.191425041196908 25.798332813615136 26.88974102377091 23.120501121417043 36 23.202046863359346 26.31187527807098 26.90552827941094 23.580549579158735 37 24.07439059236132 25.936373445575068 26.26086026191188 23.72837570015174 38 23.44094326895351 26.35336575157122 26.279126508106955 23.926564471368312 39 23.760602577367337 25.792852939756617 26.486317929233955 23.960226553642094 40 24.439324096701505 25.76440978496714 26.53876815045124 23.257497967880113 41 23.2148332356959 25.694737103051636 27.384495349283245 23.70593431196922 42 24.161155261787925 26.590174586171667 26.571647393602376 22.677022758438028 43 23.20452585391439 25.833951993695536 26.737348341229133 24.224173811160938 44 22.903524211256965 26.130256601617084 27.043960330932194 23.922258856193757 45 23.114107935248768 26.329228211956302 26.5839118731905 23.972751979604432 46 23.070790837129014 25.61958454727761 26.79306039212412 24.516564223469256 47 23.761124470115767 25.40456473492415 26.93866846893629 23.89564232602379 48 23.23792698981396 27.06535793361785 25.7688458733288 23.92786920323939 49 23.16681910284027 25.916932940696025 26.716733577666123 24.199514378797584 50 22.545665675069152 27.486300297479254 25.504149052763424 24.46388497468817 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 34.0 1 39.0 2 44.0 3 155.5 4 267.0 5 295.5 6 324.0 7 287.0 8 250.0 9 332.0 10 414.0 11 649.5 12 885.0 13 1447.0 14 2009.0 15 2740.0 16 3471.0 17 4001.0 18 4531.0 19 4876.0 20 5221.0 21 5773.5 22 6326.0 23 6700.0 24 7074.0 25 7470.0 26 7866.0 27 9612.0 28 11358.0 29 12942.5 30 14527.0 31 15998.5 32 17470.0 33 20970.5 34 24471.0 35 27329.5 36 30188.0 37 32841.5 38 35495.0 39 36091.0 40 36687.0 41 38386.0 42 40085.0 43 41022.5 44 41960.0 45 45868.5 46 49777.0 47 52662.5 48 55548.0 49 54490.5 50 53433.0 51 50675.5 52 47918.0 53 46538.0 54 45158.0 55 44993.0 56 44828.0 57 43833.0 58 42838.0 59 39292.0 60 35746.0 61 31921.0 62 28096.0 63 24609.0 64 21122.0 65 18383.0 66 15644.0 67 13519.5 68 11395.0 69 9958.5 70 8522.0 71 6866.0 72 5210.0 73 4536.0 74 3862.0 75 2984.0 76 2106.0 77 1865.0 78 1624.0 79 1378.0 80 1132.0 81 879.5 82 627.0 83 533.5 84 440.0 85 356.0 86 272.0 87 201.0 88 130.0 89 83.0 90 36.0 91 24.0 92 12.0 93 7.5 94 3.0 95 2.0 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01670056794978348 2 0.005479873858522704 3 1.3047318710768344E-4 4 1.3047318710768344E-4 5 0.0 6 6.523659355384172E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 1.3047318710768344E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 766441.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.15982172019284 #Duplication Level Percentage of deduplicated Percentage of total 1 80.73872062525378 51.801819212327395 2 12.618746365587771 16.19233034296886 3 3.3438671614774726 6.43625762809206 4 1.243391254471211 3.1910304486127936 5 0.5791243823219183 1.8578258561795544 6 0.32384381573780285 1.246665688975465 7 0.2195008333316678 0.9858194033795499 8 0.13898585981937073 0.7133846390110834 9 0.10263137798283047 0.5926329822848515 >10 0.5616248380757166 6.974152943079444 >50 0.07777973768672973 3.500702445741308 >100 0.05076035402113012 5.88084313672821 >500 6.140365395614673E-4 0.288513517909205 >1k 4.093576930409782E-4 0.33802175471019286 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1308 0.17065892873684993 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1266 0.16517905487832724 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 875 0.11416403871922301 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 791 0.1032042910021776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.3047318710768344E-4 0.0 12 0.0 0.0 0.0 1.3047318710768344E-4 0.0 13 0.0 0.0 0.0 2.609463742153669E-4 0.0 14 0.0 0.0 0.0 2.609463742153669E-4 0.0 15 0.0 0.0 0.0 2.609463742153669E-4 0.0 16 0.0 0.0 0.0 2.609463742153669E-4 0.0 17 0.0 0.0 0.0 5.218927484307338E-4 0.0 18 0.0 0.0 0.0 6.523659355384172E-4 0.0 19 0.0 0.0 0.0 7.828391226461006E-4 0.0 20 0.0 0.0 0.0 9.13312309753784E-4 0.0 21 0.0 0.0 0.0 0.0013047318710768343 0.0 22 0.0 0.0 0.0 0.002739936929261352 0.0 23 0.0 0.0 0.0 0.005871293419845754 0.0 24 0.0 0.0 0.0 0.009655015845968574 0.0 25 0.0 0.0 0.0 0.012786372336552977 0.0 26 0.0 0.0 0.0 0.016570094762675798 0.0 27 0.0 0.0 0.0 0.022702334556736918 0.0 28 0.0 0.0 0.0 0.031704984467167074 0.0 29 0.0 0.0 0.0 0.05049312341067349 0.0 30 0.0 0.0 0.0 0.08376378612313276 0.0 31 0.0 0.0 0.0 0.14391192537977482 0.0 32 0.0 0.0 0.0 0.22023873983776965 0.0 33 0.0 0.0 0.0 0.29904454485081045 0.0 34 0.0 0.0 0.0 0.3867225265871737 0.0 35 0.0 0.0 0.0 0.47961943580784433 0.0 36 0.0 0.0 0.0 0.6184429068904195 0.0 37 0.0 0.0 0.0 0.8142831607390523 0.0 38 0.0 0.0 0.0 1.04026272080956 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTTT 25 0.0023522915 35.199894 24 TCGCGTT 30 0.005743802 29.333246 23 ATACCGT 105 3.0649971E-9 23.04755 6 TGTAGGA 615 0.0 22.178797 2 GGACCGT 50 0.0025796287 21.999935 6 TAGGACC 460 0.0 21.999935 4 GTCCTAA 225 0.0 21.513855 1 TACCGTC 105 7.7370714E-8 20.952318 7 TTAGGAC 370 0.0 20.81075 3 TCCTACA 595 0.0 20.705822 2 TGGAACG 65 4.929996E-4 20.307632 5 CCGCCGT 65 4.929996E-4 20.307632 24 TGGTATA 175 0.0 20.114227 44 TACGACG 135 2.593879E-9 19.555498 5 GATATAC 275 0.0 19.202448 1 CTGTAGG 600 0.0 19.0691 1 GTCCTAC 630 0.0 18.859547 1 GACGGTA 140 4.0745363E-9 18.857086 8 GCGTATG 70 8.1197824E-4 18.857086 8 ACGACGG 140 4.0745363E-9 18.857086 6 >>END_MODULE