FastQCFastQC Report
Thu 2 Feb 2017
SRR4062661_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062661_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1430
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT50.34965034965034963No Hit
GTATCTGATCGTCTTCGAACCTCCG40.27972027972027974No Hit
GTACAGTGAAACTGCGAATGGCTCA40.27972027972027974No Hit
TATCAACGCAGAGTACTTTTTTTTT40.27972027972027974No Hit
GTACTTTTTTTTTTTTTTTTTTTTT40.27972027972027974No Hit
TCCATGTACTCTGCGTTGATACCAC30.2097902097902098No Hit
GTATCAACGCAGAGTACATGGAAGC30.2097902097902098No Hit
CCATTGGAGGGCAAGTCTGGTGCCA30.2097902097902098No Hit
GGGGGGGGGGGGGGGGGGGGGGGGG30.2097902097902098No Hit
GTATTGCGCCGCTAGAGGTGAAATT30.2097902097902098No Hit
CAGTTATCCAAGTAGGAGAGGAGCG30.2097902097902098No Hit
CTCTAATTTTTTCAAAGTAAACGCT30.2097902097902098No Hit
TCGTAGTTCCGACCATAAACGATGC30.2097902097902098No Hit
ATTGGAATGAGTCCACTTTAAATCC30.2097902097902098No Hit
GCGAATGGCTCATTAAATCAGTTAT20.13986013986013987No Hit
GTATTGTTATTTTTCGTCACTACCT20.13986013986013987No Hit
GTATCAACGCAGAGTACATGGGCTT20.13986013986013987No Hit
TAACAATACAGGACTCTTTCGAGGC20.13986013986013987No Hit
GTATCAACGCAGAGTACATGGGGTA20.13986013986013987No Hit
GAATAATTGCAATCCCCGATCCCCA20.13986013986013987No Hit
GCGCAAGACGGACCAGAGCGAAAGC20.13986013986013987No Hit
AGCTTGGTGATAGCTGGTTACCCAA20.13986013986013987No Hit
CCCACGGAATCGAGAAAGAGCTATC20.13986013986013987No Hit
CCATTATTCCTAGCTGCGGTATCCA20.13986013986013987No Hit
CTCTAGATAACCTCGGGCCGATCGC20.13986013986013987No Hit
GGCCCGAGCCGCCTGGATACCGCAG20.13986013986013987No Hit
GTTGAACCCCATTCGTGATGGGGAT20.13986013986013987No Hit
CTGTAGGACGTGGAATATGGCAAGA20.13986013986013987No Hit
ACACTGACTGGCTCAGCGTGTGCCT20.13986013986013987No Hit
GGGTAGGCACACGCTGAGCCAGTCA20.13986013986013987No Hit
GGTATCAACGCAGAGTACATGGGAA20.13986013986013987No Hit
ACTTCTTAGAGGGACAAGTGGCGTT20.13986013986013987No Hit
GTCCTGTATTGTTATTTTTCGTCAC20.13986013986013987No Hit
ATCAACGCAGAGTACTTTTTTTTTT20.13986013986013987No Hit
ATACAGGACTCTTTCGAGGCCCTGT20.13986013986013987No Hit
CTATTTCATCATCTCCCACCCAGCT20.13986013986013987No Hit
TGCCAAGAATGTTTTCATTAATCAA20.13986013986013987No Hit
GGTGACTCTAGATAACCTCGGGCCG20.13986013986013987No Hit
CTCCAATAGCGTATATTAAAGTTGC20.13986013986013987No Hit
ATTGATAGCTCTTTCTCGATTCCGT20.13986013986013987No Hit
ATAAATAATCCACCTATAACTTCTC20.13986013986013987No Hit
CTAGTTACGCGACCCCCGAGCGGTC20.13986013986013987No Hit
GTTTAGAAAACATCCCAGAAAAATG20.13986013986013987No Hit
GTGGTATCAACGCAGAGTACATGGA20.13986013986013987No Hit
AAGGTATGCTGTGTGTGAGCAACAA20.13986013986013987No Hit
TATCCAAGTAGGAGAGGAGCGAGCG20.13986013986013987No Hit
ATTCCTAGCTGCGGTATCCAGGCGG20.13986013986013987No Hit
CCTCTGTGGTCTCTTCACTAGCTCC20.13986013986013987No Hit
GTTCTACAGTGAGCACCCAGGCTCA20.13986013986013987No Hit
CAGATGCTCCTTGCTGCTCCTGGTA20.13986013986013987No Hit
TTCCCGTGTTGGGTCAAATTAAGCC20.13986013986013987No Hit
GTCCTGAGAGATGGGCGAGTGCCGT20.13986013986013987No Hit
CCCTCTCCGGAATCGAACCCTGATT20.13986013986013987No Hit
CCAATGGATCCTCGTTAAAGGATTT20.13986013986013987No Hit
CGGCCGGTACAGTGAAACTGCGAAT20.13986013986013987No Hit
GTACATGGGTGGTATCAACGCAAAA20.13986013986013987No Hit
GTATTAGCTCTAGAATTACCACAGT20.13986013986013987No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT20.13986013986013987No Hit
GTACATGGGCTTTCTGCTCTTTGAC20.13986013986013987No Hit
CCCCGGAACCCAAAGACTTTGGTTT20.13986013986013987No Hit
CTCCCGACCCGGGGAGGTAGTGACG20.13986013986013987No Hit
CTCCTACTTGGATAACTGTGGTAAT20.13986013986013987No Hit
GTACATGGAAGCAGTGGTATCAACG20.13986013986013987No Hit
GCTCGGGCCTGCTTTGAACACTCTA20.13986013986013987No Hit
AGCTAATACATGCCGACGGGCGCTG20.13986013986013987No Hit
GTTTCTAGCTGTAATTCTTTTAGTT20.13986013986013987No Hit
GGTATCAACGCAGAGTACTTTTTTT20.13986013986013987No Hit
CACCAGGAGTGGAGCCTGCGGCTTA20.13986013986013987No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)