##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062660_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2050483 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26283660971586 32.0 32.0 32.0 32.0 32.0 2 31.422789654925204 32.0 32.0 32.0 32.0 32.0 3 31.515272255366174 32.0 32.0 32.0 32.0 32.0 4 31.616544004510157 32.0 32.0 32.0 32.0 32.0 5 31.556946826674494 32.0 32.0 32.0 32.0 32.0 6 35.16080796573295 36.0 36.0 36.0 36.0 36.0 7 35.17346059440629 36.0 36.0 36.0 36.0 36.0 8 35.118847120410166 36.0 36.0 36.0 36.0 36.0 9 35.24048772898873 36.0 36.0 36.0 36.0 36.0 10 35.12030872726085 36.0 36.0 36.0 36.0 36.0 11 35.24673357447977 36.0 36.0 36.0 36.0 36.0 12 35.14894295636687 36.0 36.0 36.0 36.0 36.0 13 35.18903058450131 36.0 36.0 36.0 36.0 36.0 14 35.152682563083914 36.0 36.0 36.0 36.0 36.0 15 35.12359722075238 36.0 36.0 36.0 36.0 36.0 16 35.13830985187393 36.0 36.0 36.0 36.0 36.0 17 35.10751759463502 36.0 36.0 36.0 36.0 36.0 18 35.1210870804586 36.0 36.0 36.0 36.0 36.0 19 35.098429004288256 36.0 36.0 36.0 36.0 36.0 20 35.08182706220924 36.0 36.0 36.0 36.0 36.0 21 35.06827123170492 36.0 36.0 36.0 36.0 36.0 22 35.053689301496284 36.0 36.0 36.0 36.0 36.0 23 35.01474725710967 36.0 36.0 36.0 36.0 36.0 24 34.989848245510935 36.0 36.0 36.0 36.0 36.0 25 34.95905501289209 36.0 36.0 36.0 36.0 36.0 26 34.91715366574607 36.0 36.0 36.0 32.0 36.0 27 34.899081338396854 36.0 36.0 36.0 32.0 36.0 28 34.87543471465016 36.0 36.0 36.0 32.0 36.0 29 34.846561517457104 36.0 36.0 36.0 32.0 36.0 30 34.82417703536191 36.0 36.0 36.0 32.0 36.0 31 34.81277923299047 36.0 36.0 36.0 32.0 36.0 32 34.775369510500695 36.0 36.0 36.0 32.0 36.0 33 34.74705423063737 36.0 36.0 36.0 32.0 36.0 34 34.72477704033635 36.0 36.0 36.0 32.0 36.0 35 34.68330290960715 36.0 36.0 36.0 32.0 36.0 36 34.6514206652774 36.0 36.0 36.0 32.0 36.0 37 34.625411671298906 36.0 36.0 36.0 32.0 36.0 38 34.57910209448213 36.0 36.0 36.0 32.0 36.0 39 34.53717733821738 36.0 36.0 36.0 32.0 36.0 40 34.505129766986606 36.0 36.0 36.0 32.0 36.0 41 34.47691446356785 36.0 36.0 36.0 32.0 36.0 42 34.41836728224521 36.0 36.0 36.0 32.0 36.0 43 34.41758356445774 36.0 36.0 36.0 32.0 36.0 44 34.37496872688045 36.0 36.0 36.0 32.0 36.0 45 34.30325342858244 36.0 36.0 36.0 32.0 36.0 46 34.31873319603235 36.0 36.0 36.0 32.0 36.0 47 34.26781787510552 36.0 36.0 36.0 32.0 36.0 48 34.23671398397353 36.0 36.0 36.0 32.0 36.0 49 34.22297234358929 36.0 36.0 36.0 32.0 36.0 50 33.69167849721261 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 20.0 21 56.0 22 187.0 23 552.0 24 1539.0 25 3587.0 26 7241.0 27 13713.0 28 22856.0 29 34559.0 30 47913.0 31 68362.0 32 100005.0 33 157588.0 34 345861.0 35 1246439.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.909941307105825 17.638890176049415 11.3500731405259 26.101095376318856 2 15.99991026136864 20.500107540044645 36.9344210565846 26.56556114200212 3 18.93130895291862 24.35386796497 28.502670849770613 28.212152232340763 4 12.206080728493552 15.342227519632006 35.83466879430065 36.617022957573795 5 14.1092610862904 36.96650984182751 33.49230400837266 15.431925063509427 6 34.778189770242804 35.1500071447069 16.596837113850537 13.47496597119976 7 29.990007232442306 30.480184424840388 20.904928253489544 18.62488008922776 8 28.321487338099043 32.92962337635736 19.65191598853343 19.096973297010166 9 27.3984227130876 13.818158941088516 18.637803873526384 40.1456144722975 10 15.872894337578025 26.830605276903054 31.714283902865816 25.582216482653113 11 37.78382946847157 20.770520896783832 22.20091558915631 19.24473404558828 12 24.50003243138324 23.597171983381475 29.21145895869412 22.691336626541162 13 29.937190408308677 19.112911445742295 25.541738214849868 25.40815993109916 14 23.38473423091047 19.77792549365198 25.158706509636996 31.678633765800544 15 25.188796981003986 27.525514720190316 22.76726995542026 24.518418343385438 16 25.650883230926567 25.58782491734874 24.592839833346584 24.168452018378108 17 23.640625160023273 25.96685756477864 25.93545033048311 24.457066944714978 18 24.95373041376105 24.313393478512136 27.39491134527816 23.337964762448653 19 25.349344520291073 25.326618167524433 25.388164642184304 23.93587267000019 20 25.330470918315346 24.19429958697536 26.039669677827128 24.43555981688217 21 26.35832630653363 24.438047035747186 24.449068829149034 24.75455782857015 22 25.205037057122638 24.83956219095696 25.372802408018014 24.582598343902387 23 23.758646133618274 24.35904126003483 25.895459752653398 25.9868528536935 24 24.331047855554033 25.46346397409781 25.619671072620452 24.585817097727706 25 24.884429668522003 24.492570774788184 25.540031299942502 25.08296825674731 26 23.84087066315595 25.43971347238675 26.368860409961947 24.350555454495357 27 25.062972967832458 25.04751319567146 25.551101862341703 24.33841197415438 28 24.14382367471469 24.703789302325355 26.065029556450845 25.087357466509108 29 23.89002981248808 24.982309046210087 26.1580320344036 24.96962910689823 30 24.251213006886672 25.064240961763645 26.404266702040445 24.28027932930924 31 24.525538616999018 24.93631988170592 25.239321662262014 25.298819839033047 32 24.120268248993042 25.275166875316696 25.303209048794844 25.30135582689542 33 23.887298748636297 24.76660377091641 25.966516181797168 25.379581298650123 34 24.579282052082362 25.2362004464314 26.214360226346674 23.970157275139563 35 25.370168882160936 24.935490808750913 25.900336652388727 23.794003656699424 36 24.03687326351889 25.61518432486395 25.67224405176732 24.67569835984985 37 25.17884810554391 25.284920674787354 25.338907954857465 24.197323264811267 38 24.352067293413306 25.12890865225413 25.485605098896215 25.033418955436353 39 24.940611553473012 24.75265583767337 25.349588365277842 24.957144243575783 40 25.55446692315908 24.973628164681198 25.494042135438335 23.977862776721388 41 23.937384508918143 25.182847163326883 26.515606322998043 24.364162004756928 42 25.71652630136412 25.721451970096805 25.53203318437656 23.02998854416252 43 24.336705059247016 24.41493053100172 25.873903855823237 25.374460553928024 44 23.910220177392354 25.237175826378465 25.826841773377296 25.02576222285188 45 24.21112489106225 25.439274551410566 25.5702193093042 24.77938124822298 46 23.869277501230197 24.88011349532134 25.978148541732406 25.272460461716058 47 24.578062827148532 24.589035851553025 26.27746730892185 24.555434012376594 48 24.97645676652769 25.852250420998367 24.75665489545634 24.4146379170176 49 23.936799280949902 25.456733852463053 25.7855832016164 24.820883664970644 50 23.784249857228758 26.37958958937967 24.635220092046605 25.200940461344963 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 45.5 2 58.0 3 204.0 4 350.0 5 414.0 6 478.0 7 433.0 8 388.0 9 564.5 10 741.0 11 1090.0 12 1439.0 13 2397.0 14 3355.0 15 4655.0 16 5955.0 17 6889.0 18 7823.0 19 8396.0 20 8969.0 21 10097.0 22 11225.0 23 12066.5 24 12908.0 25 13904.5 26 14901.0 27 18855.0 28 22809.0 29 25970.5 30 29132.0 31 32158.5 32 35185.0 33 41140.0 34 47095.0 35 54722.0 36 62349.0 37 71791.0 38 81233.0 39 84956.0 40 88679.0 41 95250.0 42 101821.0 43 104904.5 44 107988.0 45 121693.0 46 135398.0 47 146685.0 48 157972.0 49 159710.5 50 161449.0 51 151173.0 52 140897.0 53 137599.0 54 134301.0 55 136516.5 56 138732.0 57 135240.5 58 131749.0 59 120774.0 60 109799.0 61 97172.0 62 84545.0 63 73418.5 64 62292.0 65 53224.5 66 44157.0 67 38518.5 68 32880.0 69 30129.5 70 27379.0 71 21186.5 72 14994.0 73 13499.0 74 12004.0 75 8622.0 76 5240.0 77 4785.0 78 4330.0 79 3643.5 80 2957.0 81 2364.5 82 1772.0 83 1547.5 84 1323.0 85 1083.0 86 843.0 87 619.5 88 396.0 89 246.0 90 96.0 91 66.0 92 36.0 93 23.5 94 11.0 95 9.0 96 7.0 97 6.5 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015606079153058085 2 0.004096595777677747 3 5.852279682396782E-4 4 2.4384498676653258E-4 5 0.0 6 6.827659629462912E-4 7 0.0 8 4.876899735330651E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.753799470661301E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2050483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.69208040490825 #Duplication Level Percentage of deduplicated Percentage of total 1 74.00066925096081 35.292458679338445 2 14.619874487352336 13.945044591209488 3 4.870128395813016 6.967996651060236 4 2.179678527221218 4.158136143083453 5 1.2109343584342633 2.8875989393756436 6 0.7036484088563315 2.0135073895177147 7 0.45088555931998414 1.50525692439505 8 0.3231763797440471 1.2330363110176208 9 0.23021015457080019 0.9881281081635264 >10 1.207508898395489 10.275429329297475 >50 0.09608194755156739 3.2057460955563983 >100 0.08839597992528234 9.085449746484345 >500 0.013155078892993239 4.299848278836105 >1k 0.005652572961833032 4.14236281266454 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3209 0.15649971250676062 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2874 0.14016209839340293 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2472 0.1205569614573737 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2443 0.11914266053412782 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2434 0.11870373955794805 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2310 0.11265638388613805 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2174 0.10602380024608835 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2051 0.10002521357163165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.8768997353306514E-5 7 0.0 0.0 0.0 0.0 4.8768997353306514E-5 8 0.0 0.0 0.0 0.0 4.8768997353306514E-5 9 0.0 0.0 0.0 0.0 4.8768997353306514E-5 10 0.0 0.0 0.0 4.8768997353306514E-5 4.8768997353306514E-5 11 0.0 0.0 0.0 4.8768997353306514E-5 4.8768997353306514E-5 12 0.0 0.0 0.0 4.8768997353306514E-5 1.9507598941322606E-4 13 0.0 0.0 0.0 4.8768997353306514E-5 3.413829814731456E-4 14 0.0 0.0 0.0 4.8768997353306514E-5 3.413829814731456E-4 15 0.0 0.0 0.0 9.753799470661303E-5 3.413829814731456E-4 16 0.0 0.0 0.0 2.4384498676653256E-4 3.413829814731456E-4 17 0.0 0.0 0.0 2.9261398411983906E-4 3.413829814731456E-4 18 0.0 0.0 0.0 3.901519788264521E-4 3.413829814731456E-4 19 0.0 0.0 0.0 5.852279682396781E-4 3.413829814731456E-4 20 0.0 0.0 0.0 9.266109497128238E-4 3.901519788264521E-4 21 0.0 0.0 0.0 0.0013167629285392758 4.3892097617975864E-4 22 0.0 0.0 0.0 0.0024384498676653255 5.364589708863717E-4 23 0.0 0.0 0.0 0.004828130737977345 5.364589708863717E-4 24 0.0 0.0 0.0 0.0073641186003492835 5.364589708863717E-4 25 0.0 0.0 0.0 0.008875957518301785 5.852279682396781E-4 26 0.0 0.0 0.0 0.01175332836214687 6.827659629462912E-4 27 0.0 0.0 0.0 0.015411003163644858 6.827659629462912E-4 28 0.0 0.0 0.0 0.02350665672429374 7.315349602995977E-4 29 0.0 0.0 0.0 0.03584521305468029 7.315349602995977E-4 30 0.0 0.0 0.0 0.06378984853812492 7.315349602995977E-4 31 0.0 0.0 0.0 0.11802097359500176 7.315349602995977E-4 32 0.0 0.0 0.0 0.17937237226546135 7.315349602995977E-4 33 0.0 0.0 0.0 0.23643209916882998 7.315349602995977E-4 34 0.0 0.0 0.0 0.3028554735640335 7.803039576529042E-4 35 0.0 0.0 0.0 0.3785449574563652 7.803039576529042E-4 36 0.0 0.0 0.0 0.4906648823716168 7.803039576529042E-4 37 0.0 0.0 0.0 0.6483350508148568 7.803039576529042E-4 38 0.0 0.0 0.0 0.8516530007807916 7.803039576529042E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCGA 75 5.4752054E-5 20.533241 10 TGTAGGA 1225 0.0 19.755495 2 TTAACGG 145 2.9649527E-10 19.72405 35 GTAGGAC 1225 0.0 19.395834 3 TAGGACG 840 0.0 18.857058 4 ATTTCGT 575 0.0 18.365135 42 GATTTCG 580 0.0 17.827507 41 CTGTAGG 1330 0.0 17.70219 1 AGGACGT 880 0.0 17.499924 5 TCGTATA 90 2.2163938E-4 17.111034 44 TACACCG 90 2.2163938E-4 17.111034 5 TTAGGAC 585 0.0 16.923002 3 GTATTAC 210 9.094947E-12 16.764692 1 ATGCGTA 105 3.7765545E-5 16.76183 22 TTAGTAC 105 3.7765545E-5 16.76183 3 CGAGCCG 845 0.0 16.662647 15 GTCCTAG 360 0.0 16.502743 1 AATCACG 685 0.0 16.379488 34 GGACGTG 920 0.0 16.260798 6 TATACCG 95 3.3478483E-4 16.210455 5 >>END_MODULE