FastQCFastQC Report
Thu 2 Feb 2017
SRR4062659_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062659_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42401
Sequences flagged as poor quality0
Sequence length25
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGG1870.44102733426098445No Hit
GCGCAAGACGGACCAGAGCGAAAGC810.19103323034834083No Hit
GTATCAACGCAGAGTACTTTTTTTT540.1273554868988939No Hit
GGACTCTTTCGAGGCCCTGTAATTG480.11320487724346125No Hit
GATTAAGAGGGACGGCCGGGGGCAT470.11084644230088914No Hit
GAACTACGACGGTATCTGATCGTCT440.1037711374731728No Hit
ATCAGATACCGTCGTAGTTCCGACC430.1014127025306007No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)