##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062658_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 826621 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.213626317260267 32.0 32.0 32.0 32.0 32.0 2 31.345858622028718 32.0 32.0 32.0 32.0 32.0 3 31.449723633926553 32.0 32.0 32.0 32.0 32.0 4 31.569286287186024 32.0 32.0 32.0 32.0 32.0 5 31.493528473145492 32.0 32.0 32.0 32.0 32.0 6 35.05814030855737 36.0 36.0 36.0 36.0 36.0 7 35.085158736591495 36.0 36.0 36.0 36.0 36.0 8 35.01549319458373 36.0 36.0 36.0 36.0 36.0 9 35.159520505769876 36.0 36.0 36.0 36.0 36.0 10 35.01940913671441 36.0 36.0 36.0 36.0 36.0 11 35.168283893102156 36.0 36.0 36.0 36.0 36.0 12 35.07323549728352 36.0 36.0 36.0 36.0 36.0 13 35.12072037850478 36.0 36.0 36.0 36.0 36.0 14 35.078787013637445 36.0 36.0 36.0 36.0 36.0 15 35.04050828614323 36.0 36.0 36.0 36.0 36.0 16 35.04641183807331 36.0 36.0 36.0 36.0 36.0 17 35.020115627355224 36.0 36.0 36.0 36.0 36.0 18 35.04044175020959 36.0 36.0 36.0 36.0 36.0 19 35.014116505629545 36.0 36.0 36.0 36.0 36.0 20 34.999304397057415 36.0 36.0 36.0 36.0 36.0 21 34.992977434640544 36.0 36.0 36.0 36.0 36.0 22 34.97830928563393 36.0 36.0 36.0 36.0 36.0 23 34.929525139090345 36.0 36.0 36.0 32.0 36.0 24 34.91726801036993 36.0 36.0 36.0 32.0 36.0 25 34.88967737330651 36.0 36.0 36.0 32.0 36.0 26 34.84186223190555 36.0 36.0 36.0 32.0 36.0 27 34.815246648705994 36.0 36.0 36.0 32.0 36.0 28 34.79921995690891 36.0 36.0 36.0 32.0 36.0 29 34.780043091090114 36.0 36.0 36.0 32.0 36.0 30 34.75870320255595 36.0 36.0 36.0 32.0 36.0 31 34.75101648760435 36.0 36.0 36.0 32.0 36.0 32 34.705173229327585 36.0 36.0 36.0 32.0 36.0 33 34.676746658988826 36.0 36.0 36.0 32.0 36.0 34 34.65313729024547 36.0 36.0 36.0 32.0 36.0 35 34.62007497994849 36.0 36.0 36.0 32.0 36.0 36 34.57405993798851 36.0 36.0 36.0 32.0 36.0 37 34.55667107416821 36.0 36.0 36.0 32.0 36.0 38 34.51614948083826 36.0 36.0 36.0 32.0 36.0 39 34.48692810852857 36.0 36.0 36.0 32.0 36.0 40 34.4577321408481 36.0 36.0 36.0 32.0 36.0 41 34.423964549654556 36.0 36.0 36.0 32.0 36.0 42 34.37569575416061 36.0 36.0 36.0 32.0 36.0 43 34.37603206306155 36.0 36.0 36.0 32.0 36.0 44 34.34029621797656 36.0 36.0 36.0 32.0 36.0 45 34.26697361910718 36.0 36.0 36.0 32.0 36.0 46 34.27078552323253 36.0 36.0 36.0 32.0 36.0 47 34.219393168090335 36.0 36.0 36.0 32.0 36.0 48 34.1819564225927 36.0 36.0 36.0 32.0 36.0 49 34.166597509620495 36.0 36.0 36.0 32.0 36.0 50 33.61526140758582 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 9.0 21 25.0 22 88.0 23 198.0 24 635.0 25 1505.0 26 3165.0 27 5810.0 28 9513.0 29 14505.0 30 20886.0 31 29520.0 32 43178.0 33 69185.0 34 148074.0 35 480320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.11218820477578 18.32223437515124 11.470361909924211 26.095215510148773 2 16.12033360674182 20.922523778069735 36.4014362413834 26.555706373805048 3 18.65492887887755 24.776136014458917 28.69995572319983 27.868979383463703 4 12.15566058849361 15.815992615703244 36.310077556891386 35.71826923891176 5 13.977143092178881 37.129349484225536 33.68472371255993 15.20878371103565 6 33.991841435442815 35.68367899968062 16.779617137824577 13.544862427051982 7 29.660630446117388 30.848720272047288 21.187097835646565 18.303551446188763 8 28.259262709270633 32.624624828065095 19.829885763850662 19.286226698813604 9 27.495067267828908 13.993837562800849 18.86414693069738 39.64694823867286 10 15.673930374379552 26.81252956312506 32.11266106232482 25.400879000170573 11 37.21705594220326 21.339767559740196 22.283489047580453 19.159687450476095 12 24.21133748114311 24.062176015368593 29.06604114824085 22.660445355247447 13 29.518485496981086 19.585759374610614 25.658191601713483 25.237563526694824 14 23.25285711347764 19.81803027022057 25.608350138697176 31.320762477604607 15 25.097717091629658 27.098634077769617 23.18837774506092 24.615271085539806 16 25.57096904143495 25.79477172730913 24.216297432559784 24.41796179869614 17 23.676872472390613 25.89747901396166 25.8036028603193 24.62204565332843 18 24.68664599616995 24.551154640397474 27.098634077769617 23.66356528566296 19 24.929441666737233 25.656739908615922 25.94175565343731 23.47206277120954 20 24.956418963466934 24.48788501622872 26.20439112967128 24.35130489063307 21 26.21781929082373 24.589140609783687 24.94758783045676 24.245452268935825 22 24.970693945592963 24.997913191172255 25.590083000552855 24.44130986268193 23 23.953057084201827 24.57232516473692 26.125273855854136 25.349343895207117 24 24.213152097515064 25.547983900723548 25.767310532880245 24.471553468881144 25 24.49465958401734 24.750157569188296 25.931351852904776 24.82383099388958 26 23.84309133206149 25.31414033759123 26.561991529370776 24.280776800976504 27 24.850566341769685 25.283049910418438 25.687709361363915 24.17867438644796 28 24.076330023069822 24.576559269604815 26.480696715907293 24.866413991418074 29 23.888335766935512 25.34680343228638 26.396256567399085 24.36860423337902 30 24.29710834832408 25.084893802601194 26.56852414830981 24.04947370076492 31 24.285373829118786 25.14804245234515 25.65069118737608 24.91589253115999 32 23.896199104547307 25.38406355512381 25.744083443319248 24.975653897009632 33 23.730706091425212 24.9616208637332 26.1996731271042 25.107999917737388 34 24.368120335679833 25.133283572519932 26.596590214862676 23.902005876937558 35 25.23296649855254 24.91274719611527 26.148621919839925 23.705664385492263 36 24.056732166252733 25.479028478589345 25.868324177585617 24.59591517757231 37 25.18022164934111 25.190625449873643 25.5497985170955 24.079354383689743 38 24.108630194490583 25.168850053410207 25.961595459103993 24.760924292995217 39 24.352756583730635 25.236716705721246 25.577622634798775 24.832904075749347 40 24.809435037338755 25.115984229773986 26.023534364599982 24.05104636828728 41 23.680622679559317 25.512417419833273 26.483116204403228 24.323843696204186 42 25.102072170922344 25.70137947136596 25.75267262747982 23.443875730231873 43 24.16294771122437 24.75124633901147 25.95506284016496 25.1307431095992 44 23.83377630135213 25.309422335024152 26.179712347012718 24.677089016611 45 24.155084373612574 25.403298488666508 25.90389065847589 24.537726479245023 46 23.849560680313424 25.2548029987213 26.053720033050293 24.84191628791499 47 24.240129394244764 24.888189387881507 26.320284628626663 24.55139658924707 48 24.692331794135402 26.076763111510598 25.1498570687171 24.0810480256369 49 23.620861313709668 25.586453767808948 25.93316646927673 24.859518449204653 50 23.438673829965605 26.308671083846164 25.298897560066823 24.953757526121404 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 39.5 2 55.0 3 138.0 4 221.0 5 266.0 6 311.0 7 263.0 8 215.0 9 293.0 10 371.0 11 546.5 12 722.0 13 1227.5 14 1733.0 15 2284.5 16 2836.0 17 3362.5 18 3889.0 19 4119.5 20 4350.0 21 4980.5 22 5611.0 23 5803.0 24 5995.0 25 6807.0 26 7619.0 27 8946.5 28 10274.0 29 11468.0 30 12662.0 31 13593.0 32 14524.0 33 16618.5 34 18713.0 35 21326.0 36 23939.0 37 28526.5 38 33114.0 39 35122.5 40 37131.0 41 40536.0 42 43941.0 43 44789.0 44 45637.0 45 50057.5 46 54478.0 47 57939.5 48 61401.0 49 61878.5 50 62356.0 51 59015.0 52 55674.0 53 54340.0 54 53006.0 55 53499.5 56 53993.0 57 52897.5 58 51802.0 59 47344.0 60 42886.0 61 37929.5 62 32973.0 63 28754.5 64 24536.0 65 21169.0 66 17802.0 67 15365.5 68 12929.0 69 11717.0 70 10505.0 71 8277.0 72 6049.0 73 5441.0 74 4833.0 75 3586.5 76 2340.0 77 2120.0 78 1900.0 79 1639.5 80 1379.0 81 1047.5 82 716.0 83 645.5 84 575.0 85 467.5 86 360.0 87 260.5 88 161.0 89 104.0 90 47.0 91 35.0 92 23.0 93 14.5 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014154007701231883 2 0.00229851407114022 3 3.629232743905611E-4 4 2.419488495937074E-4 5 0.0 6 6.048721239842685E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.419488495937074E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 826621.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.776298679275975 #Duplication Level Percentage of deduplicated Percentage of total 1 82.38947782243345 50.89716989988232 2 11.701888780927458 14.457987528844866 3 2.9219385843374894 5.415196521256006 4 1.0578650172443809 2.6140394107058516 5 0.5033967640755354 1.5548994425855647 6 0.29637306222655385 1.098529848755954 7 0.1800686756131967 0.7786783401223749 8 0.12140097713653328 0.5999762418833946 9 0.0910756798197517 0.5063686559066779 >10 0.566934299790262 7.077063603235949 >50 0.08311717965332022 3.657519005974933 >100 0.08173624157591497 9.430749033983336 >500 0.004726915166191255 1.9118224668629225 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 936 0.11323206160985506 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 921 0.11141744523790226 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 852 0.10307020992691934 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 2.419488495937074E-4 0.0 12 0.0 0.0 0.0 2.419488495937074E-4 1.209744247968537E-4 13 0.0 0.0 0.0 2.419488495937074E-4 1.209744247968537E-4 14 0.0 0.0 0.0 2.419488495937074E-4 1.209744247968537E-4 15 0.0 0.0 0.0 3.629232743905611E-4 1.209744247968537E-4 16 0.0 0.0 0.0 3.629232743905611E-4 2.419488495937074E-4 17 0.0 0.0 0.0 6.048721239842685E-4 2.419488495937074E-4 18 0.0 0.0 0.0 7.258465487811222E-4 2.419488495937074E-4 19 0.0 0.0 0.0 8.468209735779759E-4 2.419488495937074E-4 20 0.0 0.0 0.0 0.001209744247968537 2.419488495937074E-4 21 0.0 0.0 0.0 0.0014516930975622443 3.629232743905611E-4 22 0.0 0.0 0.0 0.001572667522359098 3.629232743905611E-4 23 0.0 0.0 0.0 0.0038711815934993183 3.629232743905611E-4 24 0.0 0.0 0.0 0.007016516638217515 3.629232743905611E-4 25 0.0 0.0 0.0 0.008589184160576612 3.629232743905611E-4 26 0.0 0.0 0.0 0.011976468054888516 3.629232743905611E-4 27 0.0 0.0 0.0 0.015847649648387835 3.629232743905611E-4 28 0.0 0.0 0.0 0.023710987260183326 3.629232743905611E-4 29 0.0 0.0 0.0 0.040284483457352284 3.629232743905611E-4 30 0.0 0.0 0.0 0.06750372903664437 3.629232743905611E-4 31 0.0 0.0 0.0 0.12339391329279077 3.629232743905611E-4 32 0.0 0.0 0.0 0.18472794666479558 3.629232743905611E-4 33 0.0 0.0 0.0 0.24932828950631547 3.629232743905611E-4 34 0.0 0.0 0.0 0.3204612512868654 3.629232743905611E-4 35 0.0 0.0 0.0 0.40115119262636684 3.629232743905611E-4 36 0.0 0.0 0.0 0.511842791315488 3.629232743905611E-4 37 0.0 0.0 0.0 0.6754002136408342 3.629232743905611E-4 38 0.0 0.0 0.0 0.8777904263259704 3.629232743905611E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGA 25 0.0023524116 35.199852 2 CGTCTTA 230 0.0 22.956429 15 TCTCGTC 235 0.0 22.467993 12 TAGGACG 140 7.2759576E-12 21.99991 4 CCACGCG 50 0.0025798162 21.999908 9 GTACGAA 50 0.0025798162 21.999908 19 CTAGCGG 255 0.0 20.705797 29 TTCTCGT 260 0.0 20.30761 11 CGGTCCA 285 0.0 20.070093 10 CGCAATA 285 0.0 20.070093 36 ACGCATT 55 0.0044825394 19.99992 20 TCTAGCG 265 0.0 19.924446 28 GTTAGGC 100 1.1226002E-6 19.799917 16 CAATACG 280 0.0 19.642776 38 GTCTTAG 90 9.99799E-6 19.559023 1 TTACCCC 90 1.0013671E-5 19.555475 4 ATAGGGT 320 0.0 19.24992 3 CTCGTCT 290 0.0 18.965439 13 GTCGATA 105 1.7913608E-6 18.857065 36 TCGATAT 95 1.596171E-5 18.52624 37 >>END_MODULE