##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062652_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1851037 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21745756567805 32.0 32.0 32.0 32.0 32.0 2 31.328890778520364 32.0 32.0 32.0 32.0 32.0 3 31.4469516276552 32.0 32.0 32.0 32.0 32.0 4 31.57064499521079 32.0 32.0 32.0 32.0 32.0 5 31.480189753095157 32.0 32.0 32.0 32.0 32.0 6 35.09078424688431 36.0 36.0 36.0 36.0 36.0 7 35.11025495438503 36.0 36.0 36.0 36.0 36.0 8 35.0392666381061 36.0 36.0 36.0 36.0 36.0 9 35.18958454098973 36.0 36.0 36.0 36.0 36.0 10 35.04956572991247 36.0 36.0 36.0 36.0 36.0 11 35.1943370121721 36.0 36.0 36.0 36.0 36.0 12 35.09491598493169 36.0 36.0 36.0 36.0 36.0 13 35.14534555495109 36.0 36.0 36.0 36.0 36.0 14 35.10219082600726 36.0 36.0 36.0 36.0 36.0 15 35.05707125249252 36.0 36.0 36.0 36.0 36.0 16 35.07368950485593 36.0 36.0 36.0 36.0 36.0 17 35.04478354565576 36.0 36.0 36.0 36.0 36.0 18 35.06302899401795 36.0 36.0 36.0 36.0 36.0 19 35.04567547812388 36.0 36.0 36.0 36.0 36.0 20 35.03825207167658 36.0 36.0 36.0 36.0 36.0 21 35.021357757840605 36.0 36.0 36.0 36.0 36.0 22 35.00552285016453 36.0 36.0 36.0 36.0 36.0 23 34.95590471719366 36.0 36.0 36.0 32.0 36.0 24 34.93188520812928 36.0 36.0 36.0 32.0 36.0 25 34.9064902538415 36.0 36.0 36.0 32.0 36.0 26 34.855736541192854 36.0 36.0 36.0 32.0 36.0 27 34.83551220207916 36.0 36.0 36.0 32.0 36.0 28 34.8145174839833 36.0 36.0 36.0 32.0 36.0 29 34.78166454803443 36.0 36.0 36.0 32.0 36.0 30 34.765047376146455 36.0 36.0 36.0 32.0 36.0 31 34.76794142958785 36.0 36.0 36.0 32.0 36.0 32 34.72249015011585 36.0 36.0 36.0 32.0 36.0 33 34.70486813607724 36.0 36.0 36.0 32.0 36.0 34 34.683959856015846 36.0 36.0 36.0 32.0 36.0 35 34.64842139838372 36.0 36.0 36.0 32.0 36.0 36 34.61496447666902 36.0 36.0 36.0 32.0 36.0 37 34.59316264342636 36.0 36.0 36.0 32.0 36.0 38 34.54193784348989 36.0 36.0 36.0 32.0 36.0 39 34.49844114407222 36.0 36.0 36.0 32.0 36.0 40 34.479433420293596 36.0 36.0 36.0 32.0 36.0 41 34.45556841921582 36.0 36.0 36.0 32.0 36.0 42 34.38608142354799 36.0 36.0 36.0 32.0 36.0 43 34.39645290720823 36.0 36.0 36.0 32.0 36.0 44 34.35728999474349 36.0 36.0 36.0 32.0 36.0 45 34.285923512063775 36.0 36.0 36.0 32.0 36.0 46 34.30164605029505 36.0 36.0 36.0 32.0 36.0 47 34.26123951060946 36.0 36.0 36.0 32.0 36.0 48 34.235479895863776 36.0 36.0 36.0 32.0 36.0 49 34.22370757580751 36.0 36.0 36.0 32.0 36.0 50 33.68330508790478 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 8.0 21 48.0 22 173.0 23 480.0 24 1311.0 25 3153.0 26 6522.0 27 12281.0 28 20550.0 29 31112.0 30 44450.0 31 64237.0 32 95798.0 33 154360.0 34 338387.0 35 1078164.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.378578969948265 17.914166318157797 11.56087666460263 26.146378047291304 2 16.13227903700014 20.458722634559468 36.74972960065177 26.659268727788625 3 18.88885527393427 24.148959389053 28.393195564842888 28.568989772169846 4 12.334416692958307 15.416643256302432 35.88689984830084 36.36204020243842 5 14.325483499249339 36.73324736350489 33.37858724595997 15.562681891285804 6 34.84494055208122 35.126729305598175 16.466544068389958 13.561786073930651 7 30.2655377853267 30.281312735138595 20.884466860720156 18.568682618814545 8 28.30705166887534 32.89269744472963 19.564006554163964 19.236244332231067 9 27.32268452764586 14.083619074064972 18.665753304769165 39.927943093520014 10 15.945602383960992 26.52178211456605 31.48602648137233 26.046589020100626 11 37.74576088970669 20.9927732400811 21.95915046538778 19.30231540482443 12 24.57730450552852 23.680023684021442 28.754314473454613 22.988357336995424 13 29.677202562671628 19.18746086653049 25.553946247427795 25.58139032337009 14 23.572408331113856 19.678915116229444 24.817548217566692 31.93112833509001 15 25.370589566821195 27.40863634816592 22.380751978485574 24.840022106527314 16 25.979599543391085 25.661561600335382 24.172396337836574 24.186442518436962 17 24.02701836862256 26.052369563655397 25.56777633294202 24.35283573478002 18 25.23250480676507 24.403023818540635 26.910213031938312 23.454258342755978 19 25.381070178499943 25.404246376490587 25.288149291451223 23.926534153558247 20 25.41688793903093 24.154838612086092 25.686196440157598 24.74207700872538 21 26.469811246344616 24.47671224292113 24.34008612469659 24.713390386037666 22 25.438497447646913 24.795668590093012 25.054496479540926 24.711337482719145 23 23.773160666156322 24.404860626772994 25.694678172289372 26.127300534781316 24 24.301513151817062 25.39819571407811 25.450166582299545 24.850124551805287 25 24.828190900560067 24.566013537276675 25.373074660312028 25.23272090185123 26 24.064402818528208 25.511105396596612 25.94037828525308 24.484113499622104 27 25.271834112446157 25.00457851463801 25.186638624727653 24.536948748188177 28 24.214967069810058 24.711067363861446 25.896619030305718 25.17734653602278 29 24.083851376282592 25.077132439816168 25.93713685896068 24.90187932494056 30 24.323230707976123 25.04941824501617 26.246476974798448 24.380874072209256 31 24.778975244687167 24.98394143390975 24.944828223314822 25.292255098088262 32 24.33851943532193 25.16340840296547 25.11683991189803 25.381232249814563 33 23.976614189775784 24.724627330517976 25.751835322578643 25.546923157127598 34 24.601074965006102 25.103009826383804 26.079813639597692 24.216101569012398 35 25.54616682432604 24.7847017644704 25.643517660641034 24.02561375056252 36 24.126476132027616 25.596246860543577 25.463078263697593 24.814198743731218 37 25.491224648669906 25.150928911739744 25.135856279480095 24.221990160110252 38 24.470445485422495 24.899394231449723 25.43250080900598 25.197659474121803 39 25.141744870577952 24.593133470589727 25.18863750427463 25.076484154557686 40 25.46664383261923 24.90295980037136 25.40057276002587 24.229823606983544 41 24.105136742269334 25.230289832131938 26.226380131785586 24.438193293813143 42 25.818284561572785 25.549408250618438 25.344496085167396 23.287811102641385 43 24.686972761754628 24.193681703823316 25.647677491049613 25.471668043372446 44 24.19022418244476 24.998095662053217 25.632334739932265 25.17934541556976 45 24.393083444577282 25.359244574797803 25.37356087425589 24.874111106369025 46 24.018385419592963 24.755487749536474 25.966379835680854 25.25974699518971 47 24.595955994372883 24.530641219295575 26.26075343753444 24.612649348797106 48 25.030726020063348 25.80802004498019 24.818574669225953 24.342679265730506 49 24.057595823314173 25.31797041334128 25.71834058422387 24.906093179120678 50 23.88505680062408 26.175828022793723 24.764240133633272 25.174875042948923 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 24.0 2 29.0 3 131.0 4 233.0 5 279.5 6 326.0 7 314.0 8 302.0 9 403.0 10 504.0 11 740.5 12 977.0 13 1757.0 14 2537.0 15 3405.0 16 4273.0 17 4924.0 18 5575.0 19 6138.5 20 6702.0 21 7624.0 22 8546.0 23 9372.0 24 10198.0 25 11400.0 26 12602.0 27 15428.5 28 18255.0 29 21626.0 30 24997.0 31 28489.0 32 31981.0 33 37009.0 34 42037.0 35 48789.5 36 55542.0 37 64378.0 38 73214.0 39 77935.0 40 82656.0 41 88858.5 42 95061.0 43 97706.0 44 100351.0 45 112437.0 46 124523.0 47 134487.5 48 144452.0 49 145917.0 50 147382.0 51 136921.5 52 126461.0 53 122618.5 54 118776.0 55 120924.0 56 123072.0 57 120512.5 58 117953.0 59 107919.5 60 97886.0 61 86633.5 62 75381.0 63 65875.5 64 56370.0 65 48507.0 66 40644.0 67 35857.5 68 31071.0 69 29046.0 70 27021.0 71 21072.0 72 15123.0 73 13404.0 74 11685.0 75 8379.5 76 5074.0 77 4561.5 78 4049.0 79 3492.0 80 2935.0 81 2301.5 82 1668.0 83 1444.0 84 1220.0 85 1023.0 86 826.0 87 596.0 88 366.0 89 235.0 90 104.0 91 69.5 92 35.0 93 28.0 94 21.0 95 16.0 96 11.0 97 8.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01593701260428614 2 0.0038356877793366637 3 4.8621394385957707E-4 4 2.70118857699765E-4 5 0.0 6 2.70118857699765E-4 7 5.4023771539953014E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.70118857699765E-4 47 5.4023771539953014E-5 48 0.0 49 0.0 50 5.4023771539953014E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1851037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.81509421167435 #Duplication Level Percentage of deduplicated Percentage of total 1 76.77696957764468 39.01428942374869 2 13.641024758384967 13.863399164822287 3 4.2853029040964215 6.53274212391664 4 1.7837177446182728 3.6255914095925124 5 0.9126975142767908 2.3189405087368056 6 0.5686432359958746 1.7337395765977048 7 0.3598565027406778 1.2800299462615836 8 0.26416913819429294 1.0739023716127853 9 0.1906620314153858 0.8719658180065839 >10 1.0283950520274854 9.516556778671406 >50 0.08836390051925114 3.124248583767634 >100 0.0828749794004684 9.066082218908146 >500 0.012403880490864064 4.272431136808429 >1k 0.00491878019465299 3.7060809385488267 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2507 0.13543759525066218 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2482 0.13408700096216336 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2348 0.12684781557580968 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2332 0.12598343523117042 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2230 0.1204730105340952 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2088 0.11280163497542188 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2041 0.11026251771304409 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1989 0.10745328159296655 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1982 0.10707511519218688 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1885 0.10183480935281142 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 5.402377153995301E-5 0.0 12 0.0 0.0 0.0 5.402377153995301E-5 0.0 13 0.0 0.0 0.0 5.402377153995301E-5 0.0 14 0.0 0.0 0.0 5.402377153995301E-5 0.0 15 0.0 0.0 0.0 1.0804754307990601E-4 5.402377153995301E-5 16 0.0 0.0 0.0 1.6207131461985904E-4 5.402377153995301E-5 17 0.0 0.0 0.0 2.7011885769976507E-4 5.402377153995301E-5 18 0.0 0.0 0.0 3.241426292397181E-4 5.402377153995301E-5 19 0.0 0.0 0.0 4.8621394385957707E-4 5.402377153995301E-5 20 0.0 0.0 0.0 0.0011344992023390131 5.402377153995301E-5 21 0.0 0.0 0.0 0.0016207131461985903 5.402377153995301E-5 22 5.402377153995301E-5 0.0 0.0 0.0023770459477579324 5.402377153995301E-5 23 5.402377153995301E-5 0.0 0.0 0.0034034976070170396 5.402377153995301E-5 24 5.402377153995301E-5 0.0 0.0 0.00556444846861516 5.402377153995301E-5 25 5.402377153995301E-5 0.0 0.0 0.007563328015593422 5.402377153995301E-5 26 5.402377153995301E-5 0.0 0.0 0.00950818379103173 1.0804754307990601E-4 27 5.402377153995301E-5 0.0 0.0 0.011885229738789662 1.0804754307990601E-4 28 5.402377153995301E-5 0.0 0.0 0.018206011008964164 1.0804754307990601E-4 29 5.402377153995301E-5 0.0 0.0 0.030199288290833733 1.0804754307990601E-4 30 5.402377153995301E-5 0.0 0.0 0.05418584285457287 1.0804754307990601E-4 31 5.402377153995301E-5 0.0 0.0 0.10269918969745068 1.0804754307990601E-4 32 5.402377153995301E-5 0.0 0.0 0.15499420054812518 1.0804754307990601E-4 33 5.402377153995301E-5 0.0 0.0 0.21339389758281438 1.0804754307990601E-4 34 5.402377153995301E-5 0.0 0.0 0.2728200462767627 1.0804754307990601E-4 35 5.402377153995301E-5 0.0 0.0 0.34477970996798013 1.0804754307990601E-4 36 5.402377153995301E-5 0.0 0.0 0.4520709202463268 1.0804754307990601E-4 37 5.402377153995301E-5 0.0 0.0 0.5945316057971829 1.0804754307990601E-4 38 5.402377153995301E-5 0.0 0.0 0.7860458759063162 1.0804754307990601E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATACG 60 2.86901E-4 22.005175 1 TAGGACG 630 0.0 21.301992 4 CGCAATA 750 0.0 21.119831 36 TCTAGCG 765 0.0 19.84298 28 CTAGCGG 765 0.0 19.84298 29 TAGCGGC 775 0.0 19.58694 30 CGGTCCA 775 0.0 19.58694 10 GTATAAT 205 0.0 19.321617 1 GCCGGTC 820 0.0 19.31692 8 GTCCTAC 730 0.0 19.292208 1 TTAGGAC 590 0.0 19.017311 3 AGGACGT 740 0.0 18.432285 5 CGAATGC 800 0.0 18.424852 43 ATACGAA 840 0.0 18.333187 40 GGACGTG 740 0.0 18.13499 6 GCAATAC 855 0.0 18.011553 37 CAATACG 860 0.0 17.906834 38 CGCCGGT 845 0.0 17.704002 7 CCGGTCC 885 0.0 17.649576 9 GATATAC 300 0.0 17.60414 1 >>END_MODULE