##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062650_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1338903 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226221018251508 32.0 32.0 32.0 32.0 32.0 2 31.305185663188446 32.0 32.0 32.0 32.0 32.0 3 31.419916902120615 32.0 32.0 32.0 32.0 32.0 4 31.55011079966211 32.0 32.0 32.0 32.0 32.0 5 31.45202975869051 32.0 32.0 32.0 32.0 32.0 6 35.043937462235874 36.0 36.0 36.0 36.0 36.0 7 35.06232340953751 36.0 36.0 36.0 36.0 36.0 8 34.98883937073858 36.0 36.0 36.0 36.0 36.0 9 35.1502080434505 36.0 36.0 36.0 36.0 36.0 10 34.99722534044662 36.0 36.0 36.0 36.0 36.0 11 35.15232992980074 36.0 36.0 36.0 36.0 36.0 12 35.05702504214271 36.0 36.0 36.0 36.0 36.0 13 35.10150847372812 36.0 36.0 36.0 36.0 36.0 14 35.06879885996222 36.0 36.0 36.0 36.0 36.0 15 35.01560157830702 36.0 36.0 36.0 36.0 36.0 16 35.03355284139329 36.0 36.0 36.0 36.0 36.0 17 35.00441480824227 36.0 36.0 36.0 36.0 36.0 18 35.02340946282143 36.0 36.0 36.0 36.0 36.0 19 35.011854480869786 36.0 36.0 36.0 36.0 36.0 20 34.99417582901823 36.0 36.0 36.0 36.0 36.0 21 34.99447756857666 36.0 36.0 36.0 36.0 36.0 22 34.97926735543949 36.0 36.0 36.0 36.0 36.0 23 34.934188660418265 36.0 36.0 36.0 32.0 36.0 24 34.91713888160681 36.0 36.0 36.0 32.0 36.0 25 34.88658102939496 36.0 36.0 36.0 32.0 36.0 26 34.83136791836302 36.0 36.0 36.0 32.0 36.0 27 34.822927426408036 36.0 36.0 36.0 32.0 36.0 28 34.80696659877527 36.0 36.0 36.0 32.0 36.0 29 34.78366842108801 36.0 36.0 36.0 32.0 36.0 30 34.769013139861514 36.0 36.0 36.0 32.0 36.0 31 34.765272017465044 36.0 36.0 36.0 32.0 36.0 32 34.72606006559101 36.0 36.0 36.0 32.0 36.0 33 34.710269526619925 36.0 36.0 36.0 32.0 36.0 34 34.694473012608086 36.0 36.0 36.0 32.0 36.0 35 34.669286722040354 36.0 36.0 36.0 32.0 36.0 36 34.63121077479101 36.0 36.0 36.0 32.0 36.0 37 34.62482943125828 36.0 36.0 36.0 32.0 36.0 38 34.593118396179555 36.0 36.0 36.0 32.0 36.0 39 34.58412222543381 36.0 36.0 36.0 32.0 36.0 40 34.57085165990367 36.0 36.0 36.0 32.0 36.0 41 34.54569225701937 36.0 36.0 36.0 32.0 36.0 42 34.51358164108976 36.0 36.0 36.0 32.0 36.0 43 34.500189334104114 36.0 36.0 36.0 32.0 36.0 44 34.47520768868245 36.0 36.0 36.0 32.0 36.0 45 34.43333833742997 36.0 36.0 36.0 32.0 36.0 46 34.42808627660107 36.0 36.0 36.0 32.0 36.0 47 34.402103811851944 36.0 36.0 36.0 32.0 36.0 48 34.34630290618514 36.0 36.0 36.0 32.0 36.0 49 34.34050338224651 36.0 36.0 36.0 32.0 36.0 50 33.80436222788357 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 11.0 21 34.0 22 109.0 23 309.0 24 918.0 25 2166.0 26 4390.0 27 8150.0 28 14083.0 29 21576.0 30 31889.0 31 46511.0 32 68880.0 33 113597.0 34 247708.0 35 778568.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.8446857223959 18.086210180734366 11.525765571951998 26.543338524917736 2 16.412057801801694 20.602367253712327 36.26549929753199 26.720075646953994 3 18.83483195495994 23.885780608963948 28.53161968396374 28.747767752112374 4 12.675769156942895 15.6168379887684 35.794132650584324 35.91326020370438 5 14.571705343852393 36.51317533831801 33.36858607382312 15.546533244006474 6 34.732921351503556 35.16589065303153 16.449547163554396 13.651640831910516 7 30.280983760586093 30.46964567261407 20.661840327491984 18.58753023930785 8 28.250291469957123 32.85413506430264 19.41186180029472 19.48371166544552 9 27.422823012570742 14.157933771154447 18.437257964169174 39.98198525210564 10 15.792555547339873 26.833534617518968 31.76354074940455 25.610369085736608 11 37.58113918633389 21.097644862996052 22.08091250822502 19.240303442445047 12 24.65652851625547 23.608879806826934 28.616785532633806 23.11780614428379 13 29.704392327151407 19.366899618568336 25.129826432534696 25.79888162174556 14 23.4759351498951 19.425006889968877 25.118324479069802 31.980733481066213 15 25.330214362056104 26.964612074212997 22.363083808162354 25.34208975556855 16 25.768035473816997 25.665936964813728 23.6970116580514 24.869015903317866 17 24.054169719539058 25.792682516956045 25.22460551660576 24.92854224689914 18 25.038632372920215 24.703880714286246 26.199284040740817 24.058202872052718 19 25.521938482474084 25.10301343711979 25.436271335563514 23.938776744842606 20 25.553382134478746 24.396688931162302 25.3228949371239 24.72703399723505 21 26.448069800426172 24.293694166044887 24.555326263366354 24.702909770162588 22 25.52529944290214 24.55495282331879 25.011894065514827 24.90785366826424 23 24.579674554467353 24.178599943386487 25.503042416067483 25.73868308607868 24 24.72927463752042 25.071868537153176 25.330214362056104 24.868642463270305 25 24.977164141091627 24.443667689145517 25.35896924571832 25.220198924044535 26 24.525376371551936 25.16672230923375 25.717770443415244 24.59013087579907 27 25.291003157062164 24.85930646208127 25.01645003409508 24.83324034676149 28 24.53411486866487 24.631209281030813 25.700666889236935 25.134008961067384 29 24.563691320431726 24.95303991401916 25.54852741386045 24.934741351688658 30 24.687897480250623 24.92689911068987 25.75190286376235 24.633300545297157 31 24.7870084688734 24.872227487726892 24.981421357633824 25.359342685765885 32 24.634868993496912 24.96155434710356 25.011445937457754 25.39213072194177 33 24.454348074505774 24.50834750538314 25.488478254212595 25.548826165898504 34 24.99023454275627 24.722627404673826 25.71732231535817 24.56981573721173 35 25.510585905028222 24.579226426410276 25.51805470597945 24.392132962582057 36 24.61485260694763 25.02840011561704 25.250148815858953 25.10659846157638 37 25.38354160084786 24.78738190892096 24.992400495032125 24.83667599519905 38 24.61888575946129 24.707092298695272 25.46360714704501 25.21041479479843 39 24.96446717947454 24.664520133273285 25.14610841860837 25.224904268643805 40 25.33185749826537 24.71448641163699 25.509092144837975 24.444563945259663 41 24.37151907195667 24.90344707570302 25.885669088798814 24.839364763541496 42 25.320878360867066 25.071196345067566 25.306463575031202 24.301461719034165 43 24.666536709530114 24.25059918455631 25.649879042768596 25.432985063144976 44 24.254408273041438 24.780585300055343 25.62329011138223 25.34171631552099 45 24.438215464451122 24.96835095596918 25.575340409275356 25.018093170304347 46 24.355515721861227 24.660019418925984 25.651206214056316 25.33325864515647 47 24.523602175513968 24.493428197134666 25.942451351928668 25.040518275422695 48 24.887239777638857 25.29585787768046 25.122133567554933 24.69476877712575 49 24.09659250894202 25.07552824961928 25.582286394159997 25.245592847278704 50 24.012006862344563 25.431379915318608 25.28738121787944 25.269232004457386 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 35.5 2 41.0 3 143.0 4 245.0 5 279.0 6 313.0 7 270.0 8 227.0 9 316.0 10 405.0 11 589.5 12 774.0 13 1358.0 14 1942.0 15 2560.0 16 3178.0 17 3535.0 18 3892.0 19 4131.0 20 4370.0 21 5052.5 22 5735.0 23 6262.5 24 6790.0 25 7989.5 26 9189.0 27 11469.5 28 13750.0 29 15755.0 30 17760.0 31 19619.0 32 21478.0 33 24710.0 34 27942.0 35 32299.5 36 36657.0 37 43129.5 38 49602.0 39 53244.5 40 56887.0 41 62922.0 42 68957.0 43 71003.0 44 73049.0 45 80273.0 46 87497.0 47 93043.0 48 98589.0 49 100684.5 50 102780.0 51 99783.5 52 96787.0 53 95389.0 54 93991.0 55 93824.0 56 93657.0 57 91279.0 58 88901.0 59 81793.0 60 74685.0 61 66163.5 62 57642.0 63 50083.0 64 42524.0 65 36347.5 66 30171.0 67 25850.5 68 21530.0 69 19342.5 70 17155.0 71 13468.0 72 9781.0 73 8920.5 74 8060.0 75 5939.5 76 3819.0 77 3372.0 78 2925.0 79 2533.5 80 2142.0 81 1702.0 82 1262.0 83 1086.5 84 911.0 85 709.0 86 507.0 87 381.5 88 256.0 89 166.0 90 76.0 91 50.0 92 24.0 93 16.0 94 8.0 95 5.5 96 3.0 97 2.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014788225883428449 2 0.0038837764946377746 3 4.481280570735893E-4 4 1.4937601902452978E-4 5 0.0 6 6.721920856103841E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.2406402853679465E-4 47 7.468800951226489E-5 48 0.0 49 0.0 50 1.4937601902452978E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1338903.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.82731584202895 #Duplication Level Percentage of deduplicated Percentage of total 1 82.12013383091232 50.77267451353503 2 11.304251715529581 13.9782308234769 3 2.950755869181649 5.473119452898433 4 1.2057890542110867 2.982028027742809 5 0.6334874685893522 1.9583414901220637 6 0.3766845802567651 1.3973637909814267 7 0.24949897668704096 1.0798096423724888 8 0.17532846177762051 0.8672070545937635 9 0.14776275665802407 0.8222197163026069 >10 0.7077861980484995 7.932847079214149 >50 0.06207890226979113 2.7136337549355036 >100 0.060976219964162595 7.590965627386219 >500 0.004858636368143788 2.015810346150718 >1k 6.073295460179736E-4 0.41574868028799544 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.468800951226489E-5 2 0.0 0.0 0.0 0.0 1.4937601902452978E-4 3 0.0 0.0 0.0 0.0 1.4937601902452978E-4 4 0.0 0.0 0.0 0.0 1.4937601902452978E-4 5 0.0 0.0 0.0 0.0 1.4937601902452978E-4 6 0.0 0.0 0.0 0.0 2.2406402853679467E-4 7 0.0 0.0 0.0 7.468800951226489E-5 2.9875203804905956E-4 8 0.0 0.0 0.0 7.468800951226489E-5 2.9875203804905956E-4 9 0.0 0.0 0.0 7.468800951226489E-5 2.9875203804905956E-4 10 0.0 0.0 0.0 2.2406402853679467E-4 2.9875203804905956E-4 11 0.0 0.0 0.0 2.2406402853679467E-4 2.9875203804905956E-4 12 0.0 0.0 0.0 2.2406402853679467E-4 5.228160665858543E-4 13 0.0 0.0 0.0 2.2406402853679467E-4 6.721920856103841E-4 14 0.0 0.0 0.0 2.2406402853679467E-4 6.721920856103841E-4 15 0.0 0.0 0.0 2.9875203804905956E-4 6.721920856103841E-4 16 7.468800951226489E-5 0.0 0.0 2.9875203804905956E-4 6.721920856103841E-4 17 7.468800951226489E-5 0.0 0.0 2.9875203804905956E-4 8.962561141471787E-4 18 7.468800951226489E-5 0.0 0.0 5.975040760981191E-4 9.709441236594436E-4 19 7.468800951226489E-5 0.0 0.0 8.215681046349139E-4 0.0010456321331717086 20 7.468800951226489E-5 0.0 0.0 9.709441236594436E-4 0.0011950081521962383 21 7.468800951226489E-5 0.0 0.0 0.0011203201426839733 0.0011950081521962383 22 7.468800951226489E-5 0.0 0.0 0.0019418882473188873 0.0013443841712207681 23 7.468800951226489E-5 0.0 0.0 0.0024647043139047415 0.0013443841712207681 24 7.468800951226489E-5 0.0 0.0 0.0036597124661009797 0.0013443841712207681 25 7.468800951226489E-5 0.0 0.0 0.004331904551711363 0.0013443841712207681 26 7.468800951226489E-5 0.0 0.0 0.005825664741956661 0.0014937601902452978 27 7.468800951226489E-5 0.0 0.0 0.007916929008300079 0.0016431362092698277 28 7.468800951226489E-5 0.0 0.0 0.014713537873916183 0.0016431362092698277 29 7.468800951226489E-5 0.0 0.0 0.027111747452952157 0.0016431362092698277 30 7.468800951226489E-5 0.0 0.0 0.05153472656346277 0.0016431362092698277 31 7.468800951226489E-5 0.0 0.0 0.10650510156448974 0.0017178242187820924 32 7.468800951226489E-5 0.0 0.0 0.17312680604943 0.0017178242187820924 33 7.468800951226489E-5 0.0 0.0 0.23982319854388257 0.0017178242187820924 34 7.468800951226489E-5 0.0 0.0 0.30988055146638704 0.0017925122282943574 35 7.468800951226489E-5 0.0 0.0 0.3904689137301208 0.0017925122282943574 36 7.468800951226489E-5 0.0 0.0 0.5098950409402324 0.0017925122282943574 37 7.468800951226489E-5 0.0 0.0 0.6931794162833305 0.0017925122282943574 38 7.468800951226489E-5 0.0 0.0 0.9249363097998884 0.0018672002378066223 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGGA 200 0.0 18.701256 2 GTCCTAC 310 0.0 18.453539 1 CGCAATA 365 0.0 18.082052 36 GCATTCG 345 0.0 17.854937 22 ATACGAA 390 0.0 16.922947 40 GGACCGT 105 3.773872E-5 16.762402 6 GTATTAC 120 6.401213E-6 16.501724 1 GTAATAG 80 0.0019871134 16.501724 1 ATAATAC 120 6.4057604E-6 16.50049 3 AAGGCGT 175 3.6252459E-9 16.343344 6 GCATATA 150 1.8358332E-7 16.135017 1 TCTAGCG 410 0.0 16.097439 28 CGAATGC 410 0.0 16.097439 43 TACGAAT 425 0.0 16.046936 41 GTATCAA 2755 0.0 15.812902 1 CCGCTAG 420 0.0 15.714166 36 ATACCGT 295 0.0 15.661482 6 CGCCGGT 450 0.0 15.644324 7 ATATAGT 170 4.489266E-8 15.529874 6 CAATACG 425 0.0 15.529293 38 >>END_MODULE