##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062648_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2036308 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30119755950475 32.0 32.0 32.0 32.0 32.0 2 31.437673966806592 32.0 32.0 32.0 32.0 32.0 3 31.51566658874787 32.0 32.0 32.0 32.0 32.0 4 31.612387222365182 32.0 32.0 32.0 32.0 32.0 5 31.549316704545678 32.0 32.0 32.0 32.0 32.0 6 35.15360299129601 36.0 36.0 36.0 36.0 36.0 7 35.16624498847915 36.0 36.0 36.0 36.0 36.0 8 35.11563869512864 36.0 36.0 36.0 36.0 36.0 9 35.242518322375595 36.0 36.0 36.0 36.0 36.0 10 35.120009350255465 36.0 36.0 36.0 36.0 36.0 11 35.24855571946876 36.0 36.0 36.0 36.0 36.0 12 35.15631672615341 36.0 36.0 36.0 36.0 36.0 13 35.192666826432934 36.0 36.0 36.0 36.0 36.0 14 35.15633636954724 36.0 36.0 36.0 36.0 36.0 15 35.12393802902115 36.0 36.0 36.0 36.0 36.0 16 35.13418205890268 36.0 36.0 36.0 36.0 36.0 17 35.104061369891 36.0 36.0 36.0 36.0 36.0 18 35.12170113754894 36.0 36.0 36.0 36.0 36.0 19 35.10183577337024 36.0 36.0 36.0 36.0 36.0 20 35.09751962866128 36.0 36.0 36.0 36.0 36.0 21 35.08115324400828 36.0 36.0 36.0 36.0 36.0 22 35.05831043241003 36.0 36.0 36.0 36.0 36.0 23 35.02122616028616 36.0 36.0 36.0 36.0 36.0 24 34.99581301060547 36.0 36.0 36.0 36.0 36.0 25 34.97337681725947 36.0 36.0 36.0 36.0 36.0 26 34.92332446761492 36.0 36.0 36.0 32.0 36.0 27 34.90924064532477 36.0 36.0 36.0 32.0 36.0 28 34.88934925364925 36.0 36.0 36.0 32.0 36.0 29 34.86116393001452 36.0 36.0 36.0 32.0 36.0 30 34.846763849083736 36.0 36.0 36.0 32.0 36.0 31 34.84873899233318 36.0 36.0 36.0 32.0 36.0 32 34.806456096032626 36.0 36.0 36.0 32.0 36.0 33 34.78185372743219 36.0 36.0 36.0 32.0 36.0 34 34.76285267258195 36.0 36.0 36.0 32.0 36.0 35 34.720564865432934 36.0 36.0 36.0 32.0 36.0 36 34.69985336206507 36.0 36.0 36.0 32.0 36.0 37 34.687750576042525 36.0 36.0 36.0 32.0 36.0 38 34.639398362133825 36.0 36.0 36.0 32.0 36.0 39 34.60986206408854 36.0 36.0 36.0 32.0 36.0 40 34.58951592784589 36.0 36.0 36.0 32.0 36.0 41 34.5568479817395 36.0 36.0 36.0 32.0 36.0 42 34.50084613918916 36.0 36.0 36.0 32.0 36.0 43 34.502584579542976 36.0 36.0 36.0 32.0 36.0 44 34.479435822085854 36.0 36.0 36.0 32.0 36.0 45 34.39636587392477 36.0 36.0 36.0 32.0 36.0 46 34.42816459985425 36.0 36.0 36.0 32.0 36.0 47 34.38210918976893 36.0 36.0 36.0 32.0 36.0 48 34.34959495321926 36.0 36.0 36.0 32.0 36.0 49 34.34539126693997 36.0 36.0 36.0 32.0 36.0 50 33.816306275867895 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 11.0 21 48.0 22 174.0 23 502.0 24 1322.0 25 3115.0 26 6508.0 27 12660.0 28 20969.0 29 31730.0 30 46100.0 31 65732.0 32 97311.0 33 155519.0 34 345760.0 35 1248843.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.25292042074491 17.783967450029667 11.934039551907457 26.02907257731797 2 16.01105579068646 20.460874032151764 36.79105085997668 26.737019317185094 3 18.77681649939375 24.134788068318265 28.39414563621247 28.694249796075518 4 12.37096087464476 15.525897202820213 35.91978788990429 36.18335403263074 5 14.476248190352345 36.45769696922076 33.27757883385028 15.788476006576607 6 34.60768964826332 35.12190762050311 16.556728491339175 13.713674239894397 7 30.224126322799066 30.42439082122686 20.65130650731938 18.700176348654697 8 28.262227521573358 32.54311233860497 19.725208563733972 19.469451576087703 9 27.303089709415275 14.435930124519473 18.66259917458459 39.59838099148066 10 15.89779149323187 26.58075300985902 31.12569414842941 26.395761348479702 11 37.60663907424613 21.37554829623024 21.75004959956942 19.26776302995421 12 24.49604873133141 23.792422364396742 28.514301372876794 23.197227531395054 13 29.368690787444727 19.264767412395376 25.529487680645563 25.837054119514335 14 23.69474558858483 19.62021462372097 25.003093834527977 31.681945953166217 15 25.45243646835351 26.854189051950883 22.68011518886141 25.013259290834196 16 26.082842084792674 25.798160199734028 23.74635860586905 24.372639109604243 17 24.097582487521535 25.788878696150093 25.38707307538938 24.726465740938995 18 25.162696409384044 24.607033906462085 26.54667172156668 23.683597962587193 19 25.3695413463975 25.456119604696344 25.424739283055413 23.749599765850746 20 25.496044802652644 23.956199160441347 25.71035422932091 24.8374018075851 21 26.69959554252107 24.468204220579597 24.39257715434011 24.43962308255922 22 25.336491336281153 24.52556293055864 25.239993164098944 24.897952569061264 23 24.011544422552973 24.109663174726023 25.582524843982345 26.296267558738656 24 24.238720272178867 25.460637585276885 25.35863926282272 24.942002879721535 25 24.931739206446178 24.294556619136202 25.37302804880205 25.400676125615572 26 24.208223903260215 25.227274066595033 25.95093669523471 24.613565334910042 27 25.418453397030312 24.81363330105269 25.159799008794348 24.60811429312265 28 24.47493208296584 24.366009464187147 25.959727113972935 25.19933133887408 29 24.103573722639208 25.01350483325705 26.02135826210966 24.86156318199408 30 24.556746818261285 25.02867935498952 26.053868078895725 24.360705747853466 31 24.65771386253946 24.913716392608585 24.948092331808354 25.480477413043605 32 24.538232919577982 24.93321246098331 25.024848893192974 25.503705726245734 33 24.274913225307763 24.382018830157325 25.57447105251269 25.768596892022227 34 24.739479489350334 24.939842106400405 25.91120793121669 24.409470473032567 35 25.795311907628903 24.476650879925828 25.556742889582516 24.17129432286275 36 24.43127464018213 25.35962143251414 25.17693786990966 25.03216605739407 37 25.643075605458503 24.97097688561848 25.159799008794348 24.226148500128662 38 24.558858483097843 24.58022067388627 25.50306731594631 25.35785352706958 39 25.11186912785296 24.514366196076427 25.194666032839823 25.17909864323079 40 25.389970475979073 24.88130479279166 25.331629596308613 24.39709513492065 41 23.921184810942155 25.23031879263844 26.09379327685203 24.754703119567374 42 25.8846893495483 25.2261445714499 25.33870121808685 23.55046486091495 43 24.987624661888084 23.83588337324216 25.521090129783904 25.65540183508585 44 24.389335994358415 24.800030250826495 25.57196651979956 25.238667235015527 45 24.656535258909752 25.034621481622622 25.29833404376941 25.010509215698214 46 24.182257390462244 24.74563020212571 25.69352263681262 25.378589770599426 47 24.552056518028234 24.599200709520083 26.074421034952504 24.77432173749918 48 25.340272689593125 25.58002031126922 24.694447008998637 24.385259990139016 49 24.16020767006154 25.249188850207755 25.601198640480042 24.98940483925066 50 24.181668088357995 25.892608531031915 24.74440248940852 25.18132089120157 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 33.0 2 40.0 3 170.0 4 300.0 5 343.5 6 387.0 7 363.0 8 339.0 9 457.0 10 575.0 11 889.5 12 1204.0 13 2116.5 14 3029.0 15 4057.5 16 5086.0 17 5805.5 18 6525.0 19 6970.5 20 7416.0 21 8492.5 22 9569.0 23 10353.0 24 11137.0 25 12583.0 26 14029.0 27 17612.5 28 21196.0 29 24106.0 30 27016.0 31 29490.0 32 31964.0 33 36412.5 34 40861.0 35 46657.5 36 52454.0 37 62845.0 38 73236.0 39 80584.0 40 87932.0 41 96330.5 42 104729.0 43 108448.0 44 112167.0 45 126390.0 46 140613.0 47 151064.5 48 161516.0 49 163031.5 50 164547.0 51 154347.5 52 144148.0 53 139909.0 54 135670.0 55 137422.0 56 139174.0 57 134971.0 58 130768.0 59 119696.5 60 108625.0 61 95667.5 62 82710.0 63 72487.0 64 62264.0 65 53312.5 66 44361.0 67 39296.0 68 34231.0 69 31825.5 70 29420.0 71 22784.5 72 16149.0 73 14440.0 74 12731.0 75 9058.5 76 5386.0 77 4988.0 78 4590.0 79 3989.5 80 3389.0 81 2615.0 82 1841.0 83 1646.5 84 1452.0 85 1198.5 86 945.0 87 666.5 88 388.0 89 244.0 90 100.0 91 68.5 92 37.0 93 24.5 94 12.0 95 12.5 96 13.0 97 10.0 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014732545371328896 2 0.004419763611398669 3 7.366272685664447E-4 4 3.437593919976742E-4 5 0.0 6 5.893018148531558E-4 7 4.9108484571096314E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 4.9108484571096314E-5 47 9.821696914219263E-5 48 0.0 49 4.9108484571096314E-5 50 4.9108484571096314E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2036308.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.11987747371987 #Duplication Level Percentage of deduplicated Percentage of total 1 78.24140891550756 39.21449828216452 2 12.978300156753738 13.009416273473134 3 3.826584612763252 5.7536385580354805 4 1.5354009840805964 3.0781643678059365 5 0.7945815309049253 1.991216448591781 6 0.49549099665948243 1.490036882514276 7 0.3325984188146188 1.1668854399259163 8 0.2437533391713566 0.9773509994462781 9 0.18500589007634669 0.8345225288288685 >10 1.1593320138602643 10.856591153852508 >50 0.10096006203752443 3.5480267944300157 >100 0.08836127757226274 9.384637523087424 >500 0.012607516919704848 4.340818255481175 >1k 0.005614284878306065 4.354196492362769 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3052 0.14987909491098594 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2668 0.13102143683568496 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2647 0.12999015865969193 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2624 0.12886066351455672 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2496 0.1225747774894564 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2446 0.12011935326090159 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2311 0.11348970784380359 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2251 0.11054319876953782 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2054 0.10086882730903184 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2045 0.10042685094789197 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.910848457109632E-5 7 0.0 0.0 0.0 0.0 4.910848457109632E-5 8 0.0 0.0 0.0 0.0 4.910848457109632E-5 9 0.0 0.0 0.0 0.0 4.910848457109632E-5 10 0.0 0.0 0.0 0.0 4.910848457109632E-5 11 0.0 0.0 0.0 0.0 4.910848457109632E-5 12 0.0 0.0 0.0 0.0 4.910848457109632E-5 13 0.0 0.0 0.0 0.0 4.910848457109632E-5 14 0.0 0.0 0.0 0.0 4.910848457109632E-5 15 0.0 0.0 0.0 0.0 1.9643393828438528E-4 16 0.0 0.0 0.0 1.4732545371328896E-4 2.455424228554816E-4 17 0.0 0.0 0.0 1.4732545371328896E-4 2.455424228554816E-4 18 0.0 0.0 0.0 2.455424228554816E-4 2.946509074265779E-4 19 0.0 0.0 0.0 2.455424228554816E-4 2.946509074265779E-4 20 0.0 0.0 0.0 4.910848457109632E-4 2.946509074265779E-4 21 0.0 0.0 0.0 6.384102994242522E-4 2.946509074265779E-4 22 0.0 0.0 0.0 0.0014241460525617933 2.946509074265779E-4 23 0.0 0.0 0.0 0.002750075135981394 2.946509074265779E-4 24 0.0 0.0 0.0 0.004959956941680728 2.946509074265779E-4 25 0.0 0.0 0.0 0.0067278623862401955 2.946509074265779E-4 26 0.0 0.0 0.0 0.009281503583937204 2.946509074265779E-4 27 0.0 0.0 0.0 0.01212979568906079 2.946509074265779E-4 28 0.0 0.0 0.0 0.01920141746729866 2.946509074265779E-4 29 0.0 0.0 0.0 0.030692802856935198 2.946509074265779E-4 30 0.0 0.0 0.0 0.0506308475928003 2.946509074265779E-4 31 0.0 0.0 0.0 0.09625262975934878 2.946509074265779E-4 32 0.0 0.0 0.0 0.15164700035554543 2.946509074265779E-4 33 0.0 0.0 0.0 0.20458594672318725 2.946509074265779E-4 34 0.0 0.0 0.0 0.2667081797056241 3.4375939199767424E-4 35 0.0 0.0 0.0 0.3331028508457463 3.4375939199767424E-4 36 0.0 0.0 0.0 0.43141803695708114 3.4375939199767424E-4 37 0.0 0.0 0.0 0.5779577549172326 3.4375939199767424E-4 38 0.0 0.0 0.0 0.7599537987377155 3.4375939199767424E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATT 45 0.0013986056 24.444254 13 TAGGACG 105 7.7532604E-8 20.952217 4 TTAACGG 260 0.0 20.307533 35 CGCAATA 910 0.0 19.340508 36 TAGGCCG 70 8.1263576E-4 18.856997 5 CTAGCGG 930 0.0 18.45147 29 TAACGGC 295 0.0 17.898167 36 CGGTCCA 1010 0.0 17.861246 10 ACCGTCG 535 0.0 17.682106 8 TCTAGCG 975 0.0 17.599863 28 CGAATGC 965 0.0 17.554268 43 ATACGAA 965 0.0 17.554268 40 TAGCGGC 980 0.0 17.510067 30 AATACGA 1005 0.0 17.074493 39 GTATTAG 700 0.0 16.97588 1 TACGAAT 1000 0.0 16.939869 41 CAATACG 1020 0.0 16.823399 38 GTATAGA 210 9.094947E-12 16.766302 1 GATCGAA 105 3.7766426E-5 16.761774 11 CCGTCGT 565 0.0 16.743233 9 >>END_MODULE