##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062647_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 338966 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.74738469345008 32.0 32.0 32.0 32.0 32.0 2 30.41868210971012 32.0 32.0 32.0 21.0 32.0 3 30.99743927119534 32.0 32.0 32.0 32.0 32.0 4 31.321861189617838 32.0 32.0 32.0 32.0 32.0 5 31.076261335945198 32.0 32.0 32.0 32.0 32.0 6 34.697096463952136 36.0 36.0 36.0 32.0 36.0 7 34.71159939344949 36.0 36.0 36.0 32.0 36.0 8 34.61162476472567 36.0 36.0 36.0 32.0 36.0 9 34.87740953369954 36.0 36.0 36.0 32.0 36.0 10 34.58147719830308 36.0 36.0 36.0 32.0 36.0 11 34.900223031218474 36.0 36.0 36.0 32.0 36.0 12 34.7413073877616 36.0 36.0 36.0 32.0 36.0 13 34.83751172683986 36.0 36.0 36.0 32.0 36.0 14 34.76464896184278 36.0 36.0 36.0 32.0 36.0 15 34.66431441501508 36.0 36.0 36.0 32.0 36.0 16 34.73050689449679 36.0 36.0 36.0 32.0 36.0 17 34.69488680280618 36.0 36.0 36.0 32.0 36.0 18 34.72151484219656 36.0 36.0 36.0 32.0 36.0 19 34.715163172707584 36.0 36.0 36.0 32.0 36.0 20 34.68803950838727 36.0 36.0 36.0 32.0 36.0 21 34.668757338494125 36.0 36.0 36.0 32.0 36.0 22 34.637055043868706 36.0 36.0 36.0 32.0 36.0 23 34.58361605588761 36.0 36.0 36.0 32.0 36.0 24 34.576603553158726 36.0 36.0 36.0 32.0 36.0 25 34.563050571443746 36.0 36.0 36.0 32.0 36.0 26 34.46105214092269 36.0 36.0 36.0 32.0 36.0 27 34.43859266121086 36.0 36.0 36.0 32.0 36.0 28 34.41893287232348 36.0 36.0 36.0 32.0 36.0 29 34.374571490945996 36.0 36.0 36.0 32.0 36.0 30 34.36236377689798 36.0 36.0 36.0 32.0 36.0 31 34.33656177905748 36.0 36.0 36.0 32.0 36.0 32 34.279331850392076 36.0 36.0 36.0 32.0 36.0 33 34.27824324563525 36.0 36.0 36.0 32.0 36.0 34 34.24075866016061 36.0 36.0 36.0 32.0 36.0 35 34.21402736557649 36.0 36.0 36.0 32.0 36.0 36 34.14512664987049 36.0 36.0 36.0 32.0 36.0 37 34.13196013759492 36.0 36.0 36.0 32.0 36.0 38 34.05571945268847 36.0 36.0 36.0 32.0 36.0 39 33.97594449000785 36.0 36.0 36.0 32.0 36.0 40 33.96672822642979 36.0 36.0 36.0 32.0 36.0 41 33.9466406660255 36.0 36.0 36.0 32.0 36.0 42 33.89072650354313 36.0 36.0 36.0 32.0 36.0 43 33.85947558162176 36.0 36.0 36.0 32.0 36.0 44 33.81427045780403 36.0 36.0 36.0 32.0 36.0 45 33.72275980481818 36.0 36.0 36.0 32.0 36.0 46 33.71765604809922 36.0 36.0 36.0 32.0 36.0 47 33.6944885327732 36.0 36.0 36.0 27.0 36.0 48 33.63047621295351 36.0 36.0 36.0 27.0 36.0 49 33.59763221090021 36.0 36.0 36.0 21.0 36.0 50 32.929069582199986 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 4.0 22 27.0 23 99.0 24 253.0 25 650.0 26 1332.0 27 2519.0 28 4512.0 29 7379.0 30 11433.0 31 17720.0 32 27278.0 33 45348.0 34 85783.0 35 134627.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.95060999896735 19.06412734005045 12.152182571879564 24.83308008910263 2 15.138882742546947 21.6987505716098 40.2563762151318 22.90599047071145 3 20.27223969365659 25.242354690440926 29.784108140639475 24.701297475263008 4 12.73372550639297 17.33035171669135 38.317412365842 31.618510411073675 5 13.886053468489465 37.87282500309765 34.095750016225814 14.145371512187063 6 31.60739309368224 37.790332335196844 17.6029973596094 12.999277211511512 7 27.878017264268394 31.89139913737661 21.186785695320477 19.043797903034523 8 26.09966781329101 36.108046234725606 20.167214410884867 17.625071541098517 9 27.744375542089767 14.29700913955972 18.919006626033287 39.03960869231722 10 15.088238938418602 28.423794716874255 33.40335018851448 23.084616156192656 11 36.64113804924388 21.245198633491263 23.62803349008455 18.485629827180308 12 23.781441206492687 24.51366803750229 31.33057592796918 20.37431482803585 13 30.447891528943906 20.914486998696034 25.505507927048733 23.132113545311327 14 21.88715092369146 21.65526926004378 26.139789831428523 30.317789984836235 15 24.346984653328064 30.385053368184415 23.0194178767192 22.24854410176832 16 23.498521975655375 26.86257618758224 27.250225686352024 22.388676150410365 17 22.083335791790326 27.24786556763805 27.5977531669843 23.071045473587322 18 22.344423924523404 26.643085147182905 30.156121852929203 20.85636907536449 19 25.30725795507514 25.47394133924936 26.077246685508282 23.141554020167217 20 24.567360738245135 26.685862298873637 27.375902007870994 21.370874955010237 21 25.223768755568404 25.247664957547368 25.00309765581209 24.52546863107214 22 24.07881616445307 27.78125239699557 25.96307594271992 22.17685549583144 23 23.415327790987885 27.27707203672345 26.29732775558611 23.01027241670256 24 23.733058772856275 26.97409179681738 26.652820636878033 22.640028793448312 25 24.12749361292873 26.597062832260466 26.78026704743249 22.49517650737832 26 21.197406229533343 27.592147885038614 28.302838632783228 22.90760725264481 27 23.26457520813297 27.17499690234419 27.31453892130774 22.2458889682151 28 22.178330570027672 27.71221892461191 26.708873456334853 23.400577049025568 29 22.861879952561615 26.205873155419717 26.36105096086333 24.571195931155337 30 22.913802564268984 27.058761055681103 26.729524495082103 23.297911884967814 31 23.699722096021432 26.14096989078551 26.663441171090906 23.49586684210216 32 22.557719653298562 27.873887056518942 26.94842550580294 22.619967784379554 33 22.773670515626936 27.134284854528186 27.81399904415192 22.27804558569296 34 22.46567502345368 27.622829428320244 28.100753467899438 21.81074208032664 35 23.078125829729235 27.546125570116175 27.078822064749858 22.296926535404733 36 21.98303074644655 27.375902007870994 27.59922824118053 23.041839004501927 37 23.1014320020297 27.059351085359594 25.97723665500375 23.86198025760696 38 22.998176808293458 27.907223733353785 26.04361499383419 23.050984464518564 39 23.67435081984624 25.9769416401645 26.660786037537687 23.687921502451573 40 24.790981986393916 26.548385383784805 26.628924434899076 22.031708194922203 41 23.458104942678617 25.460370656644027 28.470702076314442 22.610822324362914 42 23.600597110034634 27.883622546214077 26.921874170270765 21.593906173480526 43 22.214617395254983 27.19387785205596 27.656166105155087 22.93533864753397 44 22.05501436722267 27.076461946035884 27.471486815786832 23.39703687095461 45 22.42053775304898 27.203908356590333 27.209218623696774 23.16633526666391 46 22.851849448027238 25.812028345025755 26.841040104317248 24.495082102629762 47 23.731288683820793 26.034764548656796 26.958160995498076 23.27578577202433 48 22.12021264669613 26.86818146952792 26.38730728155626 24.624298602219692 49 22.91055740103727 25.951865378828554 27.704548538791503 23.43302868134267 50 22.025217868458782 28.079512399473693 26.063676002902948 23.831593729164577 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 5.0 2 10.0 3 21.0 4 32.0 5 52.0 6 72.0 7 70.0 8 68.0 9 84.5 10 101.0 11 138.5 12 176.0 13 282.0 14 388.0 15 516.0 16 644.0 17 851.5 18 1059.0 19 1245.0 20 1431.0 21 1779.0 22 2127.0 23 2334.0 24 2541.0 25 3300.5 26 4060.0 27 5750.0 28 7440.0 29 8766.0 30 10092.0 31 10832.0 32 11572.0 33 13914.0 34 16256.0 35 18793.5 36 21331.0 37 22274.0 38 23217.0 39 22020.0 40 20823.0 41 20418.0 42 20013.0 43 19087.0 44 18161.0 45 18698.0 46 19235.0 47 19765.5 48 20296.0 49 19853.5 50 19411.0 51 18567.0 52 17723.0 53 16582.5 54 15442.0 55 15179.5 56 14917.0 57 14540.5 58 14164.0 59 12952.5 60 11741.0 61 10406.5 62 9072.0 63 8594.5 64 8117.0 65 7214.0 66 6311.0 67 6144.5 68 5978.0 69 5464.0 70 4950.0 71 4130.0 72 3310.0 73 2850.0 74 2390.0 75 2031.0 76 1672.0 77 1383.0 78 1094.0 79 894.5 80 695.0 81 537.5 82 380.0 83 302.5 84 225.0 85 172.5 86 120.0 87 88.5 88 57.0 89 42.5 90 28.0 91 20.5 92 13.0 93 8.0 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009145460016638837 2 0.003245163231710555 3 0.0 4 0.0 5 0.0 6 2.9501483924641414E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 338966.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.68070810960383 #Duplication Level Percentage of deduplicated Percentage of total 1 85.08623775997731 58.437830597373534 2 9.770050461642825 13.42027967944382 3 2.3083815910904586 4.756238467897999 4 0.8529513035543421 2.343251980444874 5 0.44319111497043767 1.521933980202725 6 0.2686376712921568 1.1070135293556194 7 0.18436597527299578 0.8863670013146943 8 0.143236857975579 0.7870087066526015 9 0.09630764527280496 0.5953029546334305 >10 0.7550279550787414 10.007311734937243 >50 0.06580556137314852 3.124412999309987 >100 0.025376000790910156 2.8597373779220345 >500 4.301017083205111E-4 0.15331099051146949 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 519 0.15311270156888893 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 406 0.11977602473404413 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 357 0.10532029761096984 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 2.950148392464141E-4 0.0 16 0.0 0.0 0.0 2.950148392464141E-4 0.0 17 0.0 0.0 0.0 2.950148392464141E-4 0.0 18 0.0 0.0 0.0 2.950148392464141E-4 0.0 19 0.0 0.0 0.0 2.950148392464141E-4 0.0 20 0.0 0.0 0.0 5.900296784928282E-4 0.0 21 0.0 0.0 0.0 8.850445177392423E-4 0.0 22 0.0 0.0 0.0 0.0014750741962320706 0.0 23 0.0 0.0 0.0 0.002065103874724899 0.0 24 0.0 0.0 0.0 0.003245163231710555 0.0 25 0.0 0.0 0.0 0.004720237427942625 0.0 26 0.0 0.0 0.0 0.005605281945681868 0.0 27 0.0 0.0 0.0 0.007080356141913938 0.0 28 0.0 0.0 0.0 0.011800593569856565 0.0 29 0.0 0.0 0.0 0.019175964551016916 0.0 30 0.0 0.0 0.0 0.03451673619183045 0.0 31 0.0 0.0 0.0 0.07463875432934276 0.0 32 0.0 0.0 0.0 0.1259713363582188 0.0 33 0.0 0.0 0.0 0.16638836933497755 0.0 34 0.0 0.0 0.0 0.230111574612203 0.0 35 0.0 0.0 0.0 0.2888195276222394 0.0 36 0.0 0.0 0.0 0.3938448103939628 0.0 37 0.0 0.0 0.0 0.5448924080881268 0.0 38 0.0 0.0 0.0 0.7481576323289062 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACAAG 30 1.2991855E-4 36.666542 15 ATTACAC 30 0.005739352 29.333233 3 TCTAGCG 30 0.005739352 29.333233 28 ACGTGAT 30 0.005739352 29.333233 37 CCGACAA 30 0.005739352 29.333233 14 AGTACGC 55 4.9473656E-6 27.999907 3 CACTCCG 40 7.021762E-4 27.499908 34 CGGTCCA 40 7.021762E-4 27.499908 10 CTAGCAC 40 7.021762E-4 27.499908 3 TGCGTAG 65 5.910206E-7 27.076834 13 TACGCCT 50 8.3242485E-5 26.399912 5 TAGATGC 60 9.726238E-6 25.666578 14 ATATATC 80 1.3040699E-7 24.749918 3 ATAATCT 55 1.5903577E-4 23.99992 27 GTCCTAG 65 1.806384E-5 23.695724 1 CTGTGCG 65 1.8084484E-5 23.69223 10 ATAATAT 50 0.002576695 21.999926 3 AATATAT 100 4.5994966E-8 21.999926 2 TACTAGA 60 2.8669412E-4 21.999926 2 TATACTT 50 0.002576695 21.999926 5 >>END_MODULE