##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062646_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1464397 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276948122674384 32.0 32.0 32.0 32.0 32.0 2 31.399520075498653 32.0 32.0 32.0 32.0 32.0 3 31.48723194598186 32.0 32.0 32.0 32.0 32.0 4 31.58914556640037 32.0 32.0 32.0 32.0 32.0 5 31.518352605202004 32.0 32.0 32.0 32.0 32.0 6 35.11077528839515 36.0 36.0 36.0 36.0 36.0 7 35.1273834895865 36.0 36.0 36.0 36.0 36.0 8 35.063618677175654 36.0 36.0 36.0 36.0 36.0 9 35.196273961227725 36.0 36.0 36.0 36.0 36.0 10 35.07164792061169 36.0 36.0 36.0 36.0 36.0 11 35.203137537156934 36.0 36.0 36.0 36.0 36.0 12 35.110874988135045 36.0 36.0 36.0 36.0 36.0 13 35.15372539004109 36.0 36.0 36.0 36.0 36.0 14 35.11274538257044 36.0 36.0 36.0 36.0 36.0 15 35.07069462720833 36.0 36.0 36.0 36.0 36.0 16 35.08616857313966 36.0 36.0 36.0 36.0 36.0 17 35.05822191659775 36.0 36.0 36.0 36.0 36.0 18 35.075973933298144 36.0 36.0 36.0 36.0 36.0 19 35.06103194693789 36.0 36.0 36.0 36.0 36.0 20 35.04747141656259 36.0 36.0 36.0 36.0 36.0 21 35.03994886632518 36.0 36.0 36.0 36.0 36.0 22 35.02315355740281 36.0 36.0 36.0 36.0 36.0 23 34.98395585350148 36.0 36.0 36.0 36.0 36.0 24 34.96477457957098 36.0 36.0 36.0 36.0 36.0 25 34.933726305093494 36.0 36.0 36.0 32.0 36.0 26 34.89124328990021 36.0 36.0 36.0 32.0 36.0 27 34.875311817765265 36.0 36.0 36.0 32.0 36.0 28 34.85994440032314 36.0 36.0 36.0 32.0 36.0 29 34.82853215350755 36.0 36.0 36.0 32.0 36.0 30 34.811898685943774 36.0 36.0 36.0 32.0 36.0 31 34.80215064630698 36.0 36.0 36.0 32.0 36.0 32 34.77085243960483 36.0 36.0 36.0 32.0 36.0 33 34.754586358753805 36.0 36.0 36.0 32.0 36.0 34 34.73128939761554 36.0 36.0 36.0 32.0 36.0 35 34.70449201958212 36.0 36.0 36.0 32.0 36.0 36 34.668608307719836 36.0 36.0 36.0 32.0 36.0 37 34.65713669175777 36.0 36.0 36.0 32.0 36.0 38 34.62179381684065 36.0 36.0 36.0 32.0 36.0 39 34.592394002446056 36.0 36.0 36.0 32.0 36.0 40 34.58298535164986 36.0 36.0 36.0 32.0 36.0 41 34.546442665479375 36.0 36.0 36.0 32.0 36.0 42 34.52358684154638 36.0 36.0 36.0 32.0 36.0 43 34.52451896582689 36.0 36.0 36.0 32.0 36.0 44 34.472645054585605 36.0 36.0 36.0 32.0 36.0 45 34.43585585056511 36.0 36.0 36.0 32.0 36.0 46 34.419862919686395 36.0 36.0 36.0 32.0 36.0 47 34.39470307573698 36.0 36.0 36.0 32.0 36.0 48 34.35388627537478 36.0 36.0 36.0 32.0 36.0 49 34.32524445215334 36.0 36.0 36.0 32.0 36.0 50 33.81099933965994 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 18.0 21 41.0 22 108.0 23 358.0 24 1006.0 25 2209.0 26 4723.0 27 8948.0 28 15292.0 29 23496.0 30 33975.0 31 48898.0 32 72182.0 33 117140.0 34 255928.0 35 880071.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.19035403506543 17.8041316043074 11.448752439083526 26.556761921543636 2 16.171414093886856 20.41469962174008 37.04147337668856 26.3724129076845 3 18.916912730779 24.069577188559315 28.45864620578699 28.55486387487469 4 12.490832385273363 15.63459014445566 35.93506938706386 35.939508083207116 5 14.33525198426383 36.72303343970248 33.53148087574613 15.41023370028756 6 34.54706241869454 35.31380067400308 16.57269092485924 13.566445982443142 7 30.09051519569515 30.32999976099345 20.869574124467782 18.709910918843615 8 27.9526658412985 33.45779867071566 19.471495776077116 19.118039711908725 9 27.568070680286834 13.907294265148042 18.54859030713666 39.97604474742846 10 15.894596888685243 26.919954083489657 31.703424686065322 25.482024341759786 11 37.71327037681721 20.745535534421336 22.338682747916035 19.202511340845412 12 24.960307894648786 23.408269751986655 28.943039353399385 22.688382999965174 13 30.111711509925243 19.399725620852813 25.162848599116224 25.325714270105713 14 23.200470910552262 19.90648710697987 25.13198265224526 31.76105933022261 15 25.024907863099966 27.84012805270702 22.22730584670687 24.907658237486146 16 25.30092591011864 25.594766992830497 24.67336384873774 24.430943248313127 17 23.922679437338374 25.944398957386554 25.553111622053308 24.57980998322176 18 24.697332758807892 24.507766678025153 27.178080807322058 23.616819755844897 19 25.662508185963233 24.8251669458487 25.430330709500225 24.08199415868784 20 25.74028764057834 24.33431644560867 25.593742680434335 24.331653233378653 21 26.38867738734783 24.244313529732718 24.558640860367785 24.80836822255167 22 25.664283660783244 24.919813411253916 25.0709336334341 24.344969294528738 23 24.0576838111523 24.562738109952424 25.81745250775575 25.56212557113952 24 24.91469184927311 24.93907048430173 25.691803520493416 24.45443414593174 25 24.78228240019612 24.720960231412654 25.7042318442335 24.792525524157725 26 24.052357386692268 25.524840599919287 26.19972589400279 24.22307611938566 27 24.975057993153495 25.111223254349742 25.315334571157962 24.598384181338805 28 24.087593733120187 25.026205325468435 25.790137510524808 25.096063430886566 29 24.31444478512316 24.98250132989893 25.625018352263762 25.07803553271415 30 24.070112134892383 25.14645960077766 26.144549599596285 24.638878664733678 31 24.86887094141821 24.790476899365405 25.228950892415103 25.111701266801283 32 24.423021899116154 25.17561836032169 25.282351712001592 25.119008028560565 33 23.9792897690995 24.786447937273838 26.042323222459483 25.191939071167173 34 24.706619857866414 25.044711236092397 26.12898005117465 24.119688854866542 35 25.17459404792553 25.002031552919053 25.863136840624502 23.960237558530917 36 24.02702272676057 25.44897319511034 25.68483819619953 24.83916588192956 37 24.96310768186496 25.18080820979557 25.18586148428329 24.67022262405618 38 24.36531896746579 25.10944777952973 25.546009722773267 24.979223530231216 39 24.993154178818997 24.566835359537066 25.42964783456945 25.01036262707449 40 25.446173407894168 24.7012251459133 25.799970909527946 24.05263053666458 41 24.30119701146615 24.877748315518264 26.362728139978437 24.458326533037148 42 25.327831182391115 25.481409754322087 25.698768844787306 23.49199021849949 43 24.247932766865816 24.683265535233957 26.073530606795835 24.995271091104392 44 23.77033004028279 25.31458340873411 25.7738850871724 25.141201463810702 45 24.01568700290973 25.438320346190274 25.720347692599756 24.82564495830024 46 23.862466163524072 24.694822985039565 25.98258940887574 25.460121442560617 47 24.480946410670338 24.64790944525934 26.107145881305332 24.76399826276499 48 24.59927191874881 25.5513361472333 25.223214742996607 24.626177191021288 49 24.06581002282851 25.286790399051622 25.614365503343695 25.03303407477617 50 23.78303151399518 26.152607523779416 25.13683106425375 24.927529897971656 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 55.0 2 49.0 3 194.5 4 340.0 5 373.5 6 407.0 7 336.5 8 266.0 9 381.5 10 497.0 11 729.0 12 961.0 13 1630.0 14 2299.0 15 3018.5 16 3738.0 17 4206.5 18 4675.0 19 4911.5 20 5148.0 21 5833.5 22 6519.0 23 7234.5 24 7950.0 25 9106.0 26 10262.0 27 12929.0 28 15596.0 29 18432.5 30 21269.0 31 24399.0 32 27529.0 33 32625.5 34 37722.0 35 43752.0 36 49782.0 37 55453.5 38 61125.0 39 63396.0 40 65667.0 41 69614.5 42 73562.0 43 75025.0 44 76488.0 45 84183.0 46 91878.0 47 97826.5 48 103775.0 49 107045.5 50 110316.0 51 105221.5 52 100127.0 53 98758.5 54 97390.0 55 98284.5 56 99179.0 57 96830.0 58 94481.0 59 86828.5 60 79176.0 61 69579.5 62 59983.0 63 52576.5 64 45170.0 65 38687.0 66 32204.0 67 28437.0 68 24670.0 69 22390.5 70 20111.0 71 15804.0 72 11497.0 73 10280.0 74 9063.0 75 6626.5 76 4190.0 77 3819.5 78 3449.0 79 2947.0 80 2445.0 81 1901.0 82 1357.0 83 1171.5 84 986.0 85 814.0 86 642.0 87 460.5 88 279.0 89 176.0 90 73.0 91 47.0 92 21.0 93 16.0 94 11.0 95 7.5 96 4.0 97 5.5 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015023248477018185 2 0.004097249584641323 3 6.145874376961985E-4 4 2.0486247923206616E-4 5 0.0 6 8.194499169282646E-4 7 1.3657498615471077E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.828749307735539E-5 47 6.828749307735539E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1464397.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.18043634252017 #Duplication Level Percentage of deduplicated Percentage of total 1 79.803808567765 47.22824212835282 2 12.825458447202095 15.180324543965623 3 3.5424489632952776 6.289310261067682 4 1.3868574542992032 3.2829931716121425 5 0.6904545690576308 2.0430701335758656 6 0.3982799415042212 1.414222843481593 7 0.2438767617751656 1.0102913222958598 8 0.16933308685489928 0.8016964773839045 9 0.13841764925627129 0.7372455192442842 >10 0.6597906613328128 7.169011735297967 >50 0.06628797100286306 2.758876826919996 >100 0.06688567735645752 8.301340407670954 >500 0.006595917285626418 2.682521225024463 >1k 0.0015043320125112884 1.1008534041068199 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1526 0.10420671443604433 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3657498615471077E-4 2 0.0 0.0 0.0 0.0 1.3657498615471077E-4 3 0.0 0.0 0.0 0.0 1.3657498615471077E-4 4 0.0 0.0 0.0 0.0 1.3657498615471077E-4 5 0.0 0.0 0.0 6.828749307735539E-5 2.7314997230942154E-4 6 0.0 0.0 0.0 6.828749307735539E-5 2.7314997230942154E-4 7 0.0 0.0 0.0 1.3657498615471077E-4 2.7314997230942154E-4 8 0.0 0.0 0.0 3.4143746538677696E-4 2.7314997230942154E-4 9 0.0 0.0 0.0 3.4143746538677696E-4 2.7314997230942154E-4 10 0.0 0.0 0.0 3.4143746538677696E-4 2.7314997230942154E-4 11 0.0 0.0 0.0 3.4143746538677696E-4 2.7314997230942154E-4 12 0.0 0.0 0.0 3.4143746538677696E-4 4.7801245154148773E-4 13 0.0 0.0 0.0 4.097249584641323E-4 6.145874376961985E-4 14 0.0 0.0 0.0 4.097249584641323E-4 6.145874376961985E-4 15 0.0 0.0 0.0 4.097249584641323E-4 7.511624238509093E-4 16 0.0 0.0 0.0 4.097249584641323E-4 9.560249030829755E-4 17 0.0 0.0 0.0 4.097249584641323E-4 0.0010243123961603308 18 0.0 0.0 0.0 4.097249584641323E-4 0.0010243123961603308 19 0.0 0.0 0.0 5.462999446188431E-4 0.0010243123961603308 20 0.0 0.0 0.0 7.511624238509093E-4 0.0011608873823150416 21 0.0 0.0 0.0 0.0010925998892376862 0.0012974623684697524 22 0.0 0.0 0.0 0.0015023248477018187 0.0013657498615471078 23 0.0 0.0 0.0 0.002458349750784794 0.0013657498615471078 24 0.0 0.0 0.0 0.004165537077718679 0.0014340373546244632 25 0.0 0.0 0.0 0.005394711953111076 0.0014340373546244632 26 0.0 0.0 0.0 0.006692174321580828 0.0015023248477018187 27 0.0 0.0 0.0 0.008945661593133557 0.0015706123407791739 28 0.0 0.0 0.0 0.015159823463172897 0.0016388998338565293 29 0.0 0.0 0.0 0.02827102213402513 0.0016388998338565293 30 0.0 0.0 0.0 0.05251308217648629 0.0016388998338565293 31 0.0 0.0 0.0 0.10809910154145358 0.0017071873269338847 32 0.0 0.0 0.0 0.1746794072918751 0.0018437623130885955 33 0.0 0.0 0.0 0.2438546377792361 0.0018437623130885955 34 0.0 0.0 0.0 0.31589794297584606 0.002116912285398017 35 0.0 0.0 0.0 0.3971600597378989 0.002116912285398017 36 0.0 0.0 0.0 0.5194629598394425 0.002116912285398017 37 0.0 0.0 0.0 0.6880647802474329 0.002116912285398017 38 0.0 0.0 0.0 0.9143012448127114 0.002116912285398017 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 1090 0.0 21.395061 2 GTAGGAC 1035 0.0 21.044033 3 TAGGACG 920 0.0 19.609213 4 TACCGTC 330 0.0 19.333843 7 GGACCGT 105 1.7927614E-6 18.857641 6 CGTCGTA 315 0.0 18.856997 10 ACCGTCG 330 0.0 18.666523 8 TAGGACA 450 0.0 18.578268 4 ATACCGT 320 0.0 18.56299 6 CCGTCGT 320 0.0 18.562357 9 CTGTAGG 1190 0.0 18.489779 1 GTCCTAC 865 0.0 18.314497 1 GGACGTG 970 0.0 18.14481 6 AGGACGT 1000 0.0 18.040476 5 GTTATAT 135 5.5197233E-8 17.928236 1 GTCGTAG 350 0.0 16.971296 11 GTCCTAA 615 0.0 16.457405 1 TTAGGAC 700 0.0 16.343288 3 TCCTACA 1030 0.0 16.233438 2 GACGTGG 655 0.0 16.122562 7 >>END_MODULE