##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062644_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1049615 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.843065314424813 32.0 32.0 32.0 32.0 32.0 2 30.72411503265483 32.0 32.0 32.0 32.0 32.0 3 30.741035522548746 32.0 32.0 32.0 32.0 32.0 4 30.680715309899345 32.0 32.0 32.0 32.0 32.0 5 30.68601915940607 32.0 32.0 32.0 32.0 32.0 6 34.21369168695188 36.0 36.0 36.0 32.0 36.0 7 34.01654416143062 36.0 36.0 36.0 32.0 36.0 8 33.98570142385542 36.0 36.0 36.0 32.0 36.0 9 34.03404200587835 36.0 36.0 36.0 32.0 36.0 10 33.88539893198935 36.0 36.0 36.0 32.0 36.0 11 34.16799112055373 36.0 36.0 36.0 32.0 36.0 12 33.99157024242222 36.0 36.0 36.0 32.0 36.0 13 34.079069944694005 36.0 36.0 36.0 32.0 36.0 14 34.01969579321942 36.0 36.0 36.0 32.0 36.0 15 34.032155599910446 36.0 36.0 36.0 32.0 36.0 16 34.00813060026772 36.0 36.0 36.0 32.0 36.0 17 33.92741910128952 36.0 36.0 36.0 32.0 36.0 18 33.97833205508687 36.0 36.0 36.0 32.0 36.0 19 33.94304387799336 36.0 36.0 36.0 32.0 36.0 20 33.866639672641874 36.0 36.0 36.0 32.0 36.0 21 33.788289039314414 36.0 36.0 36.0 32.0 36.0 22 33.78164660375471 36.0 36.0 36.0 32.0 36.0 23 33.7372369868952 36.0 36.0 36.0 27.0 36.0 24 33.75303230232038 36.0 36.0 36.0 32.0 36.0 25 33.20771425713238 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 42.0 5 88.0 6 170.0 7 43.0 8 149.0 9 197.0 10 119.0 11 40.0 12 82.0 13 64.0 14 457.0 15 537.0 16 825.0 17 1210.0 18 1746.0 19 2419.0 20 3415.0 21 4253.0 22 5459.0 23 6956.0 24 8228.0 25 10217.0 26 13080.0 27 15947.0 28 20926.0 29 27413.0 30 35681.0 31 47899.0 32 69212.0 33 100598.0 34 227244.0 35 444896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.0034043453281 16.8692790467452 11.685393900762334 24.44192270716437 2 15.165590045542027 21.13616875321557 37.608090855389776 26.090150345852624 3 19.60601420947978 26.222178183484644 27.71686987474049 26.454937732295075 4 12.366147742020319 15.958409799919579 34.60072531296511 37.074717145094986 5 13.705588594083562 37.688986733760295 33.07706236657518 15.52836230558097 6 33.409108022299684 33.958688973972585 18.111580374069618 14.520622629658117 7 28.88221969691192 31.194753540730797 21.46041321872831 18.462613543628972 8 28.916842515788275 31.732176622762392 20.527575971111478 18.82340489033785 9 27.677928587299515 15.011772424585438 18.71381612512242 38.59648286299262 10 16.06927903334421 27.534199798168252 31.551090330199028 24.84543083828851 11 36.12399595951503 22.053073811342927 21.366782749532856 20.45614747960919 12 24.169056327306237 24.52736232979034 29.22950854077114 22.07407280213228 13 30.433310377587052 19.972262336488 25.47153074130527 24.122896544619678 14 24.27788286444964 19.429269674657387 25.901972735970453 30.390874724922522 15 25.524611584278347 25.960667245276543 25.258514625795193 23.256206544649924 16 25.079807146638185 26.046649148994007 25.28706251520079 23.58648118916702 17 23.08126685368876 25.63983208074318 27.166882400241903 24.11201866532616 18 24.556540121016017 24.40496007310947 28.539022084516606 22.499477721357906 19 24.165651504903778 27.187955809221453 26.174383962956217 22.472008722918552 20 24.421505064543236 23.775071134440516 28.48105672917976 23.322367071836485 21 25.68005082495154 25.163406798028053 24.822093591172028 24.33444878584838 22 24.075227871447392 25.586864986942654 25.724833002407284 24.613074139202666 23 23.13757777782018 25.302668058287807 25.92527223429608 25.634481929595925 24 23.03172592222303 27.293107987956816 25.827110132528418 23.848055957291734 25 24.701604163804813 25.04435871605843 25.391501442373738 24.862535677763024 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 543.0 1 543.0 2 1100.0 3 1657.0 4 1657.0 5 1657.0 6 4483.5 7 7310.0 8 7310.0 9 7310.0 10 6887.5 11 6465.0 12 6465.0 13 6465.0 14 5126.5 15 3788.0 16 3788.0 17 3788.0 18 6032.0 19 8276.0 20 8276.0 21 8276.0 22 12656.5 23 17037.0 24 17037.0 25 17037.0 26 24887.5 27 32738.0 28 32738.0 29 32738.0 30 40359.0 31 47980.0 32 47980.0 33 47980.0 34 54383.0 35 60786.0 36 60786.0 37 60786.0 38 68147.0 39 75508.0 40 75508.0 41 75508.0 42 91356.0 43 107204.0 44 107204.0 45 107204.0 46 144212.0 47 181220.0 48 181220.0 49 181220.0 50 163241.5 51 145263.0 52 145263.0 53 145263.0 54 126509.5 55 107756.0 56 107756.0 57 107756.0 58 97901.5 59 88047.0 60 88047.0 61 88047.0 62 77533.5 63 67020.0 64 67020.0 65 67020.0 66 55265.0 67 43510.0 68 43510.0 69 43510.0 70 33175.5 71 22841.0 72 22841.0 73 22841.0 74 17459.0 75 12077.0 76 12077.0 77 12077.0 78 9770.0 79 7463.0 80 7463.0 81 7463.0 82 5170.5 83 2878.0 84 2878.0 85 2878.0 86 2066.0 87 1254.0 88 1254.0 89 1254.0 90 843.0 91 432.0 92 432.0 93 432.0 94 258.5 95 85.0 96 85.0 97 85.0 98 281.0 99 477.0 100 477.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007050204122463951 2 0.003334556003868085 3 0.0032392829751861393 4 0.013052404929426505 5 0.03191646460845167 6 0.04306340896423927 7 0.06469038647504084 8 0.08517408764165908 9 0.09317702205094248 10 0.11594727590592742 11 0.11680473316406492 12 0.1285233156919442 13 0.11632836802065519 14 0.12137783854079828 15 0.10718215726718844 16 0.10956398298423708 17 0.1194723779671594 18 0.12614148997489558 19 0.12785640449117058 20 0.11890073979506771 21 0.12490294060203026 22 0.14729210234228743 23 0.13690734221595538 24 0.1321436907818581 25 0.12795167751985254 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1049615.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.25206294269549 #Duplication Level Percentage of deduplicated Percentage of total 1 74.73524539757062 34.5665927416623 2 14.519568509701882 13.431199932230218 3 4.801903459163738 6.662938231139652 4 2.066206341600605 3.8226522305723107 5 1.0555339304049578 2.4410310893620433 6 0.6228170808434228 1.7283944894973515 7 0.4093334591639879 1.325276184246283 8 0.27133771256471856 1.0039943168216303 9 0.19910337116695473 0.8288047489785167 >10 1.0897695760300536 9.488570537931848 >50 0.11087763059368265 3.579274642806307 >100 0.10302523929368636 9.274145885283415 >500 0.008877926375293074 2.7938557755938884 >1k 0.005368048505991161 5.356617078858515 >5k 6.193902122297493E-4 1.5979896280817627 >10k+ 4.1292680815316617E-4 2.0986624869339607 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 11781 1.1224115509019974 No Hit TCCATGTACTCTGCGTTGATACCAC 10196 0.9714038004411141 No Hit GTATCAACGCAGAGTACTTTTTTTT 6099 0.5810702019311843 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 5580 0.5316235000452547 No Hit GAGTACATGGAAGCAGTGGTATCAA 5055 0.4816051599872334 No Hit TATCAACGCAGAGTACTTTTTTTTT 4452 0.4241555236920204 No Hit CATGTACTCTGCGTTGATACCACTG 4436 0.4226311552331093 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3831 0.3649909728805324 No Hit CCCATGTACTCTGCGTTGATACCAC 3338 0.31802136974033335 No Hit GTACATGGGAAGCAGTGGTATCAAC 3062 0.29172601382411645 No Hit GCTTCCATGTACTCTGCGTTGATAC 3049 0.2904874644512512 No Hit GCGTTGATACCACTGCTTCCATGTA 2847 0.2712423126574982 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2700 0.2572371774412523 No Hit CATGGAAGCAGTGGTATCAACGCAG 2574 0.24523277582732717 No Hit GTATCAACGCAGAGTACATGGAAGC 2364 0.22522543980411863 No Hit GTACATGGGGTGGTATCAACGCAAA 2273 0.21655559419406162 No Hit GGTATCAACGCAGAGTACTTTTTTT 1941 0.1849249486716558 No Hit GTATCAACGCAGAGTACATGGGAAG 1934 0.18425803747088218 No Hit ACTCTGCGTTGATACCACTGCTTCC 1910 0.18197148478251549 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1801 0.17158672465618346 No Hit CAGTGGTATCAACGCAGAGTACATG 1751 0.1668230732220862 No Hit TATCAACGCAGAGTACATGGAAGCA 1449 0.13805061856013873 No Hit GTACATGGGTGGTATCAACGCAAAA 1382 0.1316673256384484 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 1264 0.12042510825397883 No Hit TATCAACGCAGAGTACATGGGAAGC 1183 0.11270799293074127 No Hit GCGTTGATACCACTGCTTCCCATGT 1165 0.11099307841446625 No Hit ATACCACTGCTTCCATGTACTCTGC 1162 0.11070725932842043 No Hit GTACATGGGAGTGGTATCAACGCAA 1101 0.10489560457882176 No Hit GAGTACATGGGAAGCAGTGGTATCA 1060 0.10098941040286201 No Hit GTATCAACGCAGAGTACATGGGGTG 1059 0.10089413737418004 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 9.527302868194528E-5 0.0 8 0.0 0.0 0.0 1.9054605736389056E-4 0.0 9 0.0 0.0 0.0 1.9054605736389056E-4 0.0 10 0.0 0.0 0.0 1.9054605736389056E-4 0.0 11 0.0 0.0 0.0 1.9054605736389056E-4 0.0 12 0.0 0.0 0.0 1.9054605736389056E-4 5.716381720916717E-4 13 0.0 0.0 0.0 1.9054605736389056E-4 7.621842294555622E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAA 35 9.933987E-5 19.00043 14 CCGATAA 40 2.756553E-4 16.627756 9 CGTAAAT 40 2.7575568E-4 16.626963 16 ACGAACG 40 2.7585606E-4 16.62617 15 CGATAAC 50 8.697321E-5 15.20252 10 CGCATCG 115 1.8189894E-12 14.869902 13 GAAATCG 45 6.7536853E-4 14.779522 11 GATAACG 45 6.7536853E-4 14.779522 11 AACGAAC 45 6.7585736E-4 14.778111 14 AATCGTA 45 6.7585736E-4 14.778111 13 TATAACG 40 0.005293519 14.243527 2 GTCCTAA 120 3.6379788E-12 14.239452 1 TAATTCC 105 1.371518E-9 13.569795 4 CGAACGA 50 0.0014976466 13.301571 16 AAATCGT 50 0.0014981852 13.300935 12 GTTTTCG 100 1.00462785E-8 13.300935 15 ATCGCCA 130 1.4551915E-11 13.155398 16 CGCGCGT 110 2.73576E-9 12.956692 7 TAATACT 110 2.746674E-9 12.952984 4 GATATAC 245 0.0 12.786448 1 >>END_MODULE