##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062644_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1049615 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11381601825431 32.0 32.0 32.0 32.0 32.0 2 31.394118795939463 32.0 32.0 32.0 32.0 32.0 3 31.49087141475684 32.0 32.0 32.0 32.0 32.0 4 31.606793919675308 32.0 32.0 32.0 32.0 32.0 5 31.5354801522463 32.0 32.0 32.0 32.0 32.0 6 35.11436479089952 36.0 36.0 36.0 36.0 36.0 7 35.127704920375564 36.0 36.0 36.0 36.0 36.0 8 35.08022465380163 36.0 36.0 36.0 36.0 36.0 9 35.15453952163412 36.0 36.0 36.0 36.0 36.0 10 35.07082120587072 36.0 36.0 36.0 36.0 36.0 11 35.17576730515475 36.0 36.0 36.0 36.0 36.0 12 35.09152784592446 36.0 36.0 36.0 36.0 36.0 13 35.1098269365434 36.0 36.0 36.0 36.0 36.0 14 35.073803251668465 36.0 36.0 36.0 36.0 36.0 15 35.06318888354301 36.0 36.0 36.0 36.0 36.0 16 35.06195319236101 36.0 36.0 36.0 36.0 36.0 17 35.04735450617608 36.0 36.0 36.0 36.0 36.0 18 35.049586753238096 36.0 36.0 36.0 36.0 36.0 19 35.002496153351466 36.0 36.0 36.0 36.0 36.0 20 34.96490141623357 36.0 36.0 36.0 36.0 36.0 21 34.92249348570667 36.0 36.0 36.0 32.0 36.0 22 34.90581213111474 36.0 36.0 36.0 32.0 36.0 23 34.86878331578722 36.0 36.0 36.0 32.0 36.0 24 34.85744106172263 36.0 36.0 36.0 32.0 36.0 25 34.823590554631934 36.0 36.0 36.0 32.0 36.0 26 34.76772340334313 36.0 36.0 36.0 32.0 36.0 27 34.750457072355104 36.0 36.0 36.0 32.0 36.0 28 34.7128842480338 36.0 36.0 36.0 32.0 36.0 29 34.68963000719312 36.0 36.0 36.0 32.0 36.0 30 34.64886172548982 36.0 36.0 36.0 32.0 36.0 31 34.61884881599443 36.0 36.0 36.0 32.0 36.0 32 34.554287048108115 36.0 36.0 36.0 32.0 36.0 33 34.49016544161431 36.0 36.0 36.0 32.0 36.0 34 34.44035289129824 36.0 36.0 36.0 32.0 36.0 35 34.34862783020441 36.0 36.0 36.0 32.0 36.0 36 34.302247967111754 36.0 36.0 36.0 32.0 36.0 37 34.249073231613494 36.0 36.0 36.0 32.0 36.0 38 34.1657017096745 36.0 36.0 36.0 32.0 36.0 39 34.04970774998452 36.0 36.0 36.0 32.0 36.0 40 33.94580107944341 36.0 36.0 36.0 32.0 36.0 41 33.93652529737094 36.0 36.0 36.0 32.0 36.0 42 33.78506023637238 36.0 36.0 36.0 32.0 36.0 43 33.791786512197326 36.0 36.0 36.0 32.0 36.0 44 33.76257770706402 36.0 36.0 36.0 32.0 36.0 45 33.544986495048185 36.0 36.0 36.0 21.0 36.0 46 33.620820967688154 36.0 36.0 36.0 27.0 36.0 47 33.48396602563797 36.0 36.0 36.0 21.0 36.0 48 33.447765132929696 36.0 36.0 36.0 21.0 36.0 49 33.4372184086546 36.0 36.0 36.0 21.0 36.0 50 32.825612248300565 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 8.0 21 31.0 22 116.0 23 389.0 24 1083.0 25 2533.0 26 5285.0 27 10187.0 28 17333.0 29 25308.0 30 34168.0 31 45677.0 32 64853.0 33 89167.0 34 172390.0 35 581081.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.60567309927924 17.341468434714 12.23314440789599 24.81971405811077 2 14.792290535049215 21.4581822789779 37.25183813896587 26.497689047007007 3 19.187852273030416 26.293144514353877 28.108291444838663 26.410711767777045 4 12.194506160371642 16.27325144910691 34.68634123847669 36.84590115204476 5 13.45779166646818 37.51375504351596 33.22427747316873 15.80417581684713 6 33.637636836539286 34.30988652928231 17.55385333600099 14.498623298177419 7 28.616302167937768 31.10435731196677 21.560667482838948 18.718673037256515 8 28.992277160937256 31.665450346508333 20.481243580973576 18.861028911580828 9 27.85583285299848 14.520657574443963 18.649790637519473 38.973718935038086 10 16.03130671722489 27.384421907080213 31.76755286462179 24.81671851107311 11 36.42459377962396 21.712437417529284 21.49026071464299 20.37270808820377 12 24.134277806624333 24.475736341420426 29.388108973290205 22.001876878665033 13 30.723741562382394 19.84241841056006 25.496396297690104 23.937443729367438 14 24.46611376552355 19.24677143524054 26.01325247828966 30.273862320946254 15 25.729815217960873 25.816799493147485 25.391310147053918 23.06207514183772 16 25.2336332845853 25.636161830766518 25.492490103514147 23.637714781134033 17 23.186120625181612 25.202383731177626 27.47969493576216 24.131800707878604 18 24.8046188364305 23.752042415552367 28.986437884367128 22.456900863650006 19 24.24936762527212 26.617950391333967 26.83965072907685 22.293031254317057 20 24.57148573524578 23.113617850354654 29.149068944327205 23.165827470072358 21 25.73991415900116 24.75707759511821 25.404362551983343 24.098645693897286 22 24.104457348646886 24.965534981874306 26.343182976615235 24.586824692863573 23 23.153346703315027 24.550620941964436 26.611852917498318 25.68417943722222 24 23.159063085035942 26.627191875116115 26.46532299938549 23.748422040462454 25 25.032511921037713 23.95525978573096 26.003439356335416 25.00878893689591 26 22.87343454504747 24.852826988943566 27.561248648313907 24.71248981769506 27 24.9349523396674 25.33643288253312 26.903293112236394 22.825321665563088 28 23.746897672003545 23.937729548453483 27.513707407001615 24.801665372541358 29 22.84456681735684 25.413222943650766 28.308093920151673 23.43411631884072 30 24.559290787574493 24.807667573348326 27.637562344288142 22.995479294789043 31 22.908113927487697 25.18895023413347 26.826026685975336 25.0769091524035 32 22.921737970589216 25.778309189559984 26.87937958203722 24.42057325781358 33 22.851331202393258 25.02803408868966 27.14957389137922 24.97106081753786 34 23.000909857423913 25.798316525583193 27.937958203722317 23.26281541327058 35 24.71734874215784 25.382640301443864 26.940259047364982 22.95975190903331 36 23.586267345645783 26.256960885658074 26.565073860415485 23.591697908280658 37 24.684670093319934 25.86643674109078 26.740280960161584 22.708612205427706 38 23.764237363223657 25.8362351909986 25.889206994945766 24.510320450831973 39 23.468509882194898 25.4136040357655 26.989515203193555 24.128370878846052 40 24.582918498687615 25.799269255870012 25.876916774245796 23.740895471196584 41 22.439846991515935 25.925887110988317 27.54047912806124 24.09378676943451 42 25.35558276129819 26.03649909728805 26.23581027329068 22.372107868123074 43 24.0357654949672 24.524516132105582 26.039643107234557 25.400075265692657 44 23.464032049846846 25.39359669974229 27.41252745054139 23.729843799869478 45 24.026524011185053 25.53078986104429 26.322032364247843 24.120653763522814 46 23.034731782606002 25.333669964701343 27.198353682064376 24.43324457062828 47 24.065490679915968 25.09882194900035 27.308584576249384 23.527102794834295 48 23.685827660618415 27.734073922342954 24.95438803751852 23.62571037952011 49 22.80350414199492 25.80374708821806 27.646994374127654 23.74575439565936 50 22.678315382306845 27.93424255560372 24.547286385960568 24.840155676128866 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 47.0 1 55.5 2 64.0 3 310.0 4 556.0 5 608.0 6 660.0 7 631.0 8 602.0 9 766.0 10 930.0 11 1383.0 12 1836.0 13 3094.0 14 4352.0 15 5834.0 16 7316.0 17 8348.0 18 9380.0 19 9669.0 20 9958.0 21 10519.5 22 11081.0 23 10983.5 24 10886.0 25 10037.0 26 9188.0 27 10597.5 28 12007.0 29 13442.5 30 14878.0 31 16373.5 32 17869.0 33 20264.5 34 22660.0 35 25191.0 36 27722.0 37 31369.0 38 35016.0 39 37378.0 40 39740.0 41 43848.0 42 47956.0 43 51498.0 44 55040.0 45 66684.5 46 78329.0 47 87273.0 48 96217.0 49 92639.5 50 89062.0 51 80037.0 52 71012.0 53 67343.5 54 63675.0 55 64144.0 56 64613.0 57 62738.0 58 60863.0 59 56036.0 60 51209.0 61 45490.0 62 39771.0 63 34479.0 64 29187.0 65 24998.5 66 20810.0 67 17701.0 68 14592.0 69 13004.0 70 11416.0 71 9010.5 72 6605.0 73 5792.0 74 4979.0 75 3719.0 76 2459.0 77 2185.5 78 1912.0 79 1615.5 80 1319.0 81 1037.5 82 756.0 83 642.5 84 529.0 85 429.5 86 330.0 87 241.0 88 152.0 89 101.5 90 51.0 91 28.5 92 6.0 93 6.0 94 6.0 95 4.0 96 2.0 97 5.5 98 9.0 99 4.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016291687904612644 2 0.004573105376733374 3 2.8581908604583586E-4 4 2.8581908604583586E-4 5 0.0 6 4.7636514340972645E-4 7 0.0 8 9.52730286819453E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1049615.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.83721122336098 #Duplication Level Percentage of deduplicated Percentage of total 1 76.0246559376912 39.40906148025443 2 13.947467150483387 14.45995601420992 3 4.529588183245717 7.044036582292446 4 1.8820717618224045 3.902454058204445 5 0.9882070372492107 2.5612948461149543 6 0.5759162340406723 1.791233488255736 7 0.3870765434990621 1.4045477981478551 8 0.25968255480602237 1.0768975555601437 9 0.1936274612605529 0.9033396847205786 >10 1.0200792270566452 9.83602319221056 >50 0.09434135209645894 3.4607597348952366 >100 0.08785383019795201 8.75728970460851 >500 0.0066583952122631854 2.3476131997799534 >1k 0.0024044204933172616 1.9425382275888932 >5k 3.6991084512573257E-4 1.1029544331564398 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 6368 0.6066986466466276 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 5136 0.48932227531047096 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2380 0.22674980826302976 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2178 0.20750465646927682 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2076 0.1977868075437184 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1682 0.16024923424303197 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1612 0.1535801222352958 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1513 0.14414809239578322 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1470 0.14005135216245956 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1432 0.13643097707254564 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1391 0.1325247828965859 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1343 0.12795167751985254 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1089 0.10375232823463841 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1053 0.10032249920208838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 9.527302868194528E-5 11 0.0 0.0 0.0 0.0 9.527302868194528E-5 12 0.0 0.0 0.0 0.0 2.8581908604583586E-4 13 0.0 0.0 0.0 0.0 3.810921147277811E-4 14 0.0 0.0 0.0 9.527302868194528E-5 3.810921147277811E-4 15 0.0 0.0 0.0 9.527302868194528E-5 4.7636514340972645E-4 16 0.0 0.0 0.0 1.9054605736389056E-4 4.7636514340972645E-4 17 0.0 0.0 0.0 2.8581908604583586E-4 4.7636514340972645E-4 18 0.0 0.0 0.0 3.810921147277811E-4 4.7636514340972645E-4 19 0.0 0.0 0.0 5.716381720916717E-4 4.7636514340972645E-4 20 0.0 0.0 0.0 9.527302868194529E-4 4.7636514340972645E-4 21 0.0 0.0 0.0 0.002000733602320851 4.7636514340972645E-4 22 0.0 0.0 0.0 0.0040967402333236475 4.7636514340972645E-4 23 0.0 0.0 0.0 0.00809820743796535 4.7636514340972645E-4 24 0.0 0.0 0.0 0.015053138531747355 4.7636514340972645E-4 25 0.0 0.0 0.0 0.0201978820805724 4.7636514340972645E-4 26 0.0 0.0 0.0 0.028200816489855805 4.7636514340972645E-4 27 0.0 0.0 0.0 0.03610847787045726 5.716381720916717E-4 28 0.0 0.0 0.0 0.050971070344840726 5.716381720916717E-4 29 0.0 0.0 0.0 0.07402714328587148 5.716381720916717E-4 30 0.0 0.0 0.0 0.11918655888111356 5.716381720916717E-4 31 0.0 0.0 0.0 0.19731044240030868 5.716381720916717E-4 32 0.0 0.0 0.0 0.2913449217093887 5.716381720916717E-4 33 0.0 0.0 0.0 0.37061208157276715 5.716381720916717E-4 34 0.0 0.0 0.0 0.47474550192213333 6.66911200773617E-4 35 0.0 0.0 0.0 0.5876440409102385 6.66911200773617E-4 36 0.0 0.0 0.0 0.7497987357269094 6.66911200773617E-4 37 0.0 0.0 0.0 0.9826460178255837 6.66911200773617E-4 38 0.0 0.0 0.0 1.2534119653396723 6.66911200773617E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 30 0.005744886 29.33311 4 AACGCGC 30 0.005744886 29.33311 42 TATGCGT 70 3.215021E-5 21.999834 39 GTGTATA 445 0.0 21.758865 1 TGGTATA 310 0.0 21.290161 44 GATCGAA 65 4.93182E-4 20.307537 11 AATCGAG 110 1.2653436E-7 19.999847 22 TGATCGA 80 8.987655E-5 19.249855 10 GTATATC 460 0.0 19.13029 3 CGCAATA 255 0.0 18.980247 36 TGTATAT 495 0.0 18.667414 2 ACGACGG 240 0.0 18.333195 6 ACGGTAT 240 0.0 18.333195 9 TATATCA 485 0.0 18.144192 4 CGCTAGA 255 0.0 18.11751 37 ATAAGGT 85 1.430688E-4 18.11751 4 CGACGGT 245 0.0 17.95905 7 TACGACG 245 0.0 17.95905 5 GTCGTAT 135 5.523907E-8 17.925789 43 CGGTGAT 135 5.523907E-8 17.925789 43 >>END_MODULE