##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062643_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 693786 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.092792301949014 32.0 32.0 32.0 32.0 32.0 2 30.785923901606548 32.0 32.0 32.0 32.0 32.0 3 30.815850997281583 32.0 32.0 32.0 32.0 32.0 4 30.712174935787115 32.0 32.0 32.0 32.0 32.0 5 30.721994966747673 32.0 32.0 32.0 32.0 32.0 6 34.19066830405918 36.0 36.0 36.0 32.0 36.0 7 34.05878325593194 36.0 36.0 36.0 32.0 36.0 8 34.01512570158521 36.0 36.0 36.0 32.0 36.0 9 34.19760560172733 36.0 36.0 36.0 32.0 36.0 10 33.87244193454466 36.0 36.0 36.0 32.0 36.0 11 34.18086412813173 36.0 36.0 36.0 32.0 36.0 12 33.99293442070033 36.0 36.0 36.0 32.0 36.0 13 34.10096773356626 36.0 36.0 36.0 32.0 36.0 14 33.987370745446 36.0 36.0 36.0 32.0 36.0 15 33.99491485847221 36.0 36.0 36.0 32.0 36.0 16 34.0105450383836 36.0 36.0 36.0 32.0 36.0 17 33.890353797856974 36.0 36.0 36.0 32.0 36.0 18 33.95470937724313 36.0 36.0 36.0 32.0 36.0 19 33.92141813181586 36.0 36.0 36.0 32.0 36.0 20 33.83850495685989 36.0 36.0 36.0 32.0 36.0 21 33.774919067262815 36.0 36.0 36.0 32.0 36.0 22 33.79097877443477 36.0 36.0 36.0 32.0 36.0 23 33.70386689843842 36.0 36.0 36.0 32.0 36.0 24 33.67184837975975 36.0 36.0 36.0 27.0 36.0 25 33.07477666023817 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 19.0 5 65.0 6 114.0 7 29.0 8 110.0 9 126.0 10 77.0 11 27.0 12 59.0 13 43.0 14 214.0 15 443.0 16 697.0 17 916.0 18 1097.0 19 1345.0 20 1586.0 21 1847.0 22 2281.0 23 2907.0 24 3947.0 25 5196.0 26 6983.0 27 9436.0 28 13064.0 29 18045.0 30 25295.0 31 36721.0 32 56620.0 33 86160.0 34 186381.0 35 231931.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.78285117921027 17.509481395419236 10.949408052447145 25.758259372923355 2 17.06637146456566 20.458889359751613 36.30236305822458 26.172376117458146 3 19.519461949596693 24.409741641249763 27.980264182056146 28.0905322270974 4 12.795396194537306 15.127860259742507 35.659022008485096 36.417721537235096 5 14.829980621943342 36.43882070683769 32.97830926455661 15.75288940666236 6 33.8031398301602 35.28177574742926 16.836030610964748 14.079053811445801 7 29.792653447410476 30.52967409552711 21.03032890447866 18.647343552583756 8 28.58195971620729 31.89508671604283 19.90270953371553 19.62024403403435 9 27.730143134768287 13.868822705349556 18.581117637129342 39.81991652275282 10 16.47098720002309 25.91324299753236 30.86237499458851 26.75339480785604 11 38.10296210138047 21.18380152217896 21.510951664901278 19.202284711539296 12 24.48594030311734 23.76805360913422 28.59091283031231 23.155093257436132 13 29.860593990821716 19.346119433139954 25.368285854475136 25.425000721563194 14 23.832353650035863 19.530791111701216 24.50891961593913 32.12793562232379 15 25.79570362610263 26.60695552544506 22.54752143930113 25.049819409151187 16 26.325814420612748 25.49537667674832 23.637822362801007 24.540986539837924 17 23.985539664901218 25.208895559436016 25.662332414529605 25.143232361133162 18 25.319709335469298 23.848057786533314 27.02242042445103 23.809812453546353 19 25.85837622207661 24.93815650085585 25.06516298684617 24.138304290221367 20 25.623982637004882 23.757806998302954 25.66626453169555 24.951945832996618 21 27.031411232420027 23.983085704389488 23.7364429467243 25.249060116466183 22 25.739691521533587 24.578819351718863 24.783076267944658 24.898412858802896 23 24.278512035263603 24.131291685369906 25.300683131290242 26.28951314807625 24 24.539060932716968 25.27656344036982 24.97780997836563 25.20656564854758 25 25.022189573281878 24.257280705678944 24.990294316727113 25.73023540431206 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 90.0 1 90.0 2 251.5 3 413.0 4 413.0 5 413.0 6 1183.0 7 1953.0 8 1953.0 9 1953.0 10 2054.5 11 2156.0 12 2156.0 13 2156.0 14 2026.5 15 1897.0 16 1897.0 17 1897.0 18 3223.5 19 4550.0 20 4550.0 21 4550.0 22 7479.0 23 10408.0 24 10408.0 25 10408.0 26 15829.0 27 21250.0 28 21250.0 29 21250.0 30 26182.5 31 31115.0 32 31115.0 33 31115.0 34 37557.5 35 44000.0 36 44000.0 37 44000.0 38 48365.5 39 52731.0 40 52731.0 41 52731.0 42 60530.0 43 68329.0 44 68329.0 45 68329.0 46 81184.0 47 94039.0 48 94039.0 49 94039.0 50 90738.5 51 87438.0 52 87438.0 53 87438.0 54 79781.0 55 72124.0 56 72124.0 57 72124.0 58 67512.0 59 62900.0 60 62900.0 61 62900.0 62 57799.0 63 52698.0 64 52698.0 65 52698.0 66 45662.5 67 38627.0 68 38627.0 69 38627.0 70 29803.0 71 20979.0 72 20979.0 73 20979.0 74 16876.5 75 12774.0 76 12774.0 77 12774.0 78 10263.5 79 7753.0 80 7753.0 81 7753.0 82 5543.0 83 3333.0 84 3333.0 85 3333.0 86 2386.5 87 1440.0 88 1440.0 89 1440.0 90 943.5 91 447.0 92 447.0 93 447.0 94 252.5 95 58.0 96 58.0 97 58.0 98 171.0 99 284.0 100 284.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008504063212575637 2 0.0034592799508782247 3 0.003171006621638373 4 0.014269529797372678 5 0.031421792887143876 6 0.04453822936755714 7 0.06543804573744641 8 0.08705854543043533 9 0.09556260864301096 10 0.11761551832985964 11 0.11992170496377846 12 0.132461594785712 13 0.12193961826845742 14 0.12611958154243527 15 0.11285900839740207 16 0.11213832507430245 17 0.12338098491465668 18 0.1284257681763541 19 0.13087609147489282 20 0.11790379165909949 21 0.12698440153015483 22 0.14860490122314374 23 0.13649742139506996 24 0.13073195481027292 25 0.12871404150559396 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 693786.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.88638380182853 #Duplication Level Percentage of deduplicated Percentage of total 1 77.20318553231802 37.74184558656674 2 13.543395935636166 13.241753033792683 3 4.1373749713400345 6.067839023430247 4 1.6618093796563669 3.2495940455743897 5 0.8392212948891777 2.051324715830993 6 0.4804521789041484 1.409254176979979 7 0.323984191661519 1.1086890877503133 8 0.23435666810563807 0.9165480018823974 9 0.1677922815230091 0.7382482086166455 >10 1.1204698160813507 10.677199372990083 >50 0.1402795383856034 4.780465649930292 >100 0.13613622703314882 13.018309935167233 >500 0.00917439790875393 3.0668933886670207 >1k 0.002367586557097789 1.932035772820992 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 2891 0.41669909741620614 No Hit TCCATGTACTCTGCGTTGATACCAC 2483 0.35789133825127634 No Hit GTATCAACGCAGAGTACTTTTTTTT 1973 0.28438163929511406 No Hit TATCAACGCAGAGTACTTTTTTTTT 1320 0.19026039729830238 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1270 0.18305356406730605 No Hit GAGTACATGGAAGCAGTGGTATCAA 1218 0.17555845750706991 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1153 0.16618957430677472 No Hit CATGTACTCTGCGTTGATACCACTG 1046 0.15076695119244263 No Hit GCGCAAGACGGACCAGAGCGAAAGC 921 0.13274986811495187 No Hit GATTAAGAGGGACGGCCGGGGGCAT 911 0.13130850146875261 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 860 0.1239575315731364 No Hit GAATAGGACCGCGGTTCTATTTTGT 858 0.12366925824389653 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 839 0.12093066161611794 No Hit GAATAACGCCGCCGCATCGCCAGTC 801 0.11545346836056075 No Hit GTATCTGATCGTCTTCGAACCTCCG 782 0.11271487173278216 No Hit GAACTACGACGGTATCTGATCGTCT 780 0.1124265984035423 No Hit GTCCTATTCCATTATTCCTAGCTGC 776 0.11185005174506259 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 757 0.109111455117284 No Hit GGGTAGGCACACGCTGAGCCAGTCA 750 0.10810249846494452 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.4413666461992602E-4 0.0 8 0.0 0.0 0.0 1.4413666461992602E-4 0.0 9 0.0 0.0 0.0 1.4413666461992602E-4 0.0 10 0.0 0.0 0.0 1.4413666461992602E-4 0.0 11 0.0 0.0 0.0 1.4413666461992602E-4 0.0 12 0.0 0.0 0.0 1.4413666461992602E-4 0.0 13 0.0 0.0 0.0 1.4413666461992602E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGGA 45 6.7815697E-4 14.770312 2 TAGTACG 65 3.383304E-6 14.608002 2 CTGTACT 40 0.0052853115 14.245886 4 ACTCTAA 95 4.8621587E-9 14.004045 10 GCGTTAT 95 4.9330993E-9 13.989899 1 CTAACAG 55 1.9636881E-4 13.813194 3 GTCCGTA 55 1.9697081E-4 13.808212 1 TTGCATC 50 0.0014948266 13.303842 12 CGTCTTA 50 0.0014972694 13.300961 15 CCCAATT 50 0.0014980843 13.299999 13 TAAGGCT 50 0.0015013481 13.29616 4 TGTAAGG 50 0.0015037999 13.2932825 2 GATATAC 130 1.4551915E-11 13.144356 1 GTATCCT 65 5.480977E-5 13.144356 1 CGTTATT 95 7.412382E-8 12.993432 2 ACTGTTC 140 3.6379788E-12 12.896582 8 GTCCTAC 275 0.0 12.772596 1 TATACAC 120 7.403287E-10 12.662095 3 GTTTTCG 160 0.0 12.46965 15 GAACAGT 115 5.2787072E-9 12.394883 6 >>END_MODULE