##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062642_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1113974 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277273975873765 32.0 32.0 32.0 32.0 32.0 2 31.42802345476645 32.0 32.0 32.0 32.0 32.0 3 31.50792657638329 32.0 32.0 32.0 32.0 32.0 4 31.60388483034613 32.0 32.0 32.0 32.0 32.0 5 31.550598128861175 32.0 32.0 32.0 32.0 32.0 6 35.1257156809764 36.0 36.0 36.0 36.0 36.0 7 35.138726756638846 36.0 36.0 36.0 36.0 36.0 8 35.0810952499789 36.0 36.0 36.0 36.0 36.0 9 35.20511071174013 36.0 36.0 36.0 36.0 36.0 10 35.08469677030164 36.0 36.0 36.0 36.0 36.0 11 35.210272412102974 36.0 36.0 36.0 36.0 36.0 12 35.12487903667411 36.0 36.0 36.0 36.0 36.0 13 35.16402716759996 36.0 36.0 36.0 36.0 36.0 14 35.12072454114728 36.0 36.0 36.0 36.0 36.0 15 35.08857747128748 36.0 36.0 36.0 36.0 36.0 16 35.104577844725284 36.0 36.0 36.0 36.0 36.0 17 35.07815352961559 36.0 36.0 36.0 36.0 36.0 18 35.08802539377041 36.0 36.0 36.0 36.0 36.0 19 35.0598802126441 36.0 36.0 36.0 36.0 36.0 20 35.05287556082997 36.0 36.0 36.0 36.0 36.0 21 35.05257932411349 36.0 36.0 36.0 36.0 36.0 22 35.02835254682784 36.0 36.0 36.0 36.0 36.0 23 35.002113155244196 36.0 36.0 36.0 36.0 36.0 24 34.97711975324379 36.0 36.0 36.0 36.0 36.0 25 34.95399443793123 36.0 36.0 36.0 32.0 36.0 26 34.91310838493538 36.0 36.0 36.0 32.0 36.0 27 34.896151077134654 36.0 36.0 36.0 32.0 36.0 28 34.886761270909375 36.0 36.0 36.0 32.0 36.0 29 34.85435297412686 36.0 36.0 36.0 32.0 36.0 30 34.83577175050764 36.0 36.0 36.0 32.0 36.0 31 34.833690014309134 36.0 36.0 36.0 32.0 36.0 32 34.7942869402697 36.0 36.0 36.0 32.0 36.0 33 34.763230560138744 36.0 36.0 36.0 32.0 36.0 34 34.753296755579576 36.0 36.0 36.0 32.0 36.0 35 34.72031483679152 36.0 36.0 36.0 32.0 36.0 36 34.69075400323526 36.0 36.0 36.0 32.0 36.0 37 34.6756701682445 36.0 36.0 36.0 32.0 36.0 38 34.63759836405517 36.0 36.0 36.0 32.0 36.0 39 34.62584943634232 36.0 36.0 36.0 32.0 36.0 40 34.61138680076914 36.0 36.0 36.0 32.0 36.0 41 34.571925377073434 36.0 36.0 36.0 32.0 36.0 42 34.54589963500046 36.0 36.0 36.0 32.0 36.0 43 34.52733008131249 36.0 36.0 36.0 32.0 36.0 44 34.49084808083492 36.0 36.0 36.0 32.0 36.0 45 34.4434591830689 36.0 36.0 36.0 32.0 36.0 46 34.43670139518517 36.0 36.0 36.0 32.0 36.0 47 34.39386107754759 36.0 36.0 36.0 32.0 36.0 48 34.34346133751775 36.0 36.0 36.0 32.0 36.0 49 34.330780610678524 36.0 36.0 36.0 32.0 36.0 50 33.80818852145562 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 41.0 22 92.0 23 280.0 24 789.0 25 1803.0 26 3728.0 27 7060.0 28 11835.0 29 18121.0 30 25809.0 31 37034.0 32 53739.0 33 85711.0 34 183693.0 35 684229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7835615134677 18.3309945206242 11.67431157653933 26.211132389368775 2 16.346253113988823 20.85508449850753 36.391049666719034 26.407612720784613 3 18.546061059259387 24.386988124423794 28.733526217563 28.333424598753826 4 12.563230886206398 15.873275205054341 35.9184648101884 35.645029098550864 5 14.36909658573719 36.67168174481631 33.26307436259734 15.696147306849173 6 33.904982993243074 35.59713062033145 16.701272656599958 13.796613729825516 7 29.91173941223045 30.79578158915738 20.77310601504164 18.51937298357053 8 28.026417133613528 32.52014858515549 19.820121475007497 19.633312806223486 9 27.453423508986745 14.263349054825337 19.05439444726717 39.22883298892075 10 16.00629817212969 26.582128487738494 31.60334083201224 25.808232508119577 11 37.035604062572375 21.47554610789839 22.446753694430928 19.042096135098305 12 24.6435733688578 24.16438803778185 28.562785127839607 22.62925346552074 13 29.302209925904915 19.62074518794873 25.573756658593467 25.50328822755289 14 23.471642964737057 19.94095014784905 25.33685705411437 31.25054983329952 15 25.105164034349098 27.074868892810784 22.819473344979325 25.000493727860796 16 25.59458299744877 26.00006822421349 24.052177160328696 24.353171618009036 17 23.73179266302445 25.797550032586038 25.71253907182753 24.758118232561984 18 24.661527109250304 24.647612960446114 26.93922838414541 23.75163154615817 19 25.29592252601946 25.177248302025003 26.052762452265494 23.474066719690047 20 25.378958575334792 24.28746092817247 25.930587248894497 24.40299324759824 21 26.395319818954484 24.279022670187995 25.04798137119897 24.277676139658556 22 25.392872724138982 24.734239757839948 25.402118900441124 24.470768617579942 23 24.086019960968567 24.41699716510439 26.124936488643364 25.37204638528368 24 24.422832130731955 25.276083642885737 25.797819338691923 24.503264887690378 25 24.601023004127565 24.520680015871108 25.963083519004932 24.915213460996398 26 23.946339860714883 25.22931414916327 26.49388585370933 24.33046013641252 27 25.01135574079826 25.0926861847763 25.52788485189062 24.368073222534818 28 24.227585203963468 24.769249551605334 26.35824534504396 24.644919899387236 29 24.142035630993185 25.244933903304744 26.129694229847377 24.483336235854697 30 24.208374701743487 25.162256928797262 26.417043844829415 24.21232452462984 31 24.48414415417236 24.90067093127847 25.5961988340841 25.018986080465073 32 24.18530414533912 25.110909231274697 25.569178454793377 25.134608168592802 33 23.99328889184128 24.689175869454765 26.106892979548896 25.21064225915506 34 24.517089267792606 24.89573365267053 26.470545991199074 24.11663108833779 35 25.25364146739511 24.762875973765993 25.916134487878534 24.067348070960364 36 24.156488392009148 25.13909660369093 25.890640176521174 24.813774827778744 37 25.095020171027333 24.97661525313876 25.52267826717679 24.405686308657117 38 24.189074430821545 24.844745029955817 26.1008784765174 24.865302062705233 39 24.512151989184666 24.770326776028885 25.638749198814338 25.078772035972115 40 24.82580383384172 24.88083204814475 26.23158170657484 24.06178241143869 41 23.824344194747813 25.05857407803055 26.63563063410816 24.481451093113485 42 24.79932206676278 25.32617457858083 26.05518620721848 23.819317147437914 43 24.01348684978285 24.387912105668537 26.362195167930313 25.236405876618306 44 23.789603707088318 24.816916732347433 26.226105815755123 25.167373744809122 45 23.78870602006869 25.190803376021343 26.250343365285005 24.770147238624958 46 23.733340036069098 24.79476612090239 26.28115762231221 25.190736220716303 47 23.92317953560855 24.659372660403207 26.62225509751574 24.795192706472502 48 24.258914480948388 25.624386206500333 25.608945989762777 24.507753322788503 49 23.38600362306481 25.311003667949162 26.224759285225684 25.078233423760338 50 23.180433295570634 25.784264264695583 25.844858138520287 25.190444301213493 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 126.0 1 105.5 2 85.0 3 250.0 4 415.0 5 464.0 6 513.0 7 421.5 8 330.0 9 446.5 10 563.0 11 836.0 12 1109.0 13 1842.0 14 2575.0 15 3354.5 16 4134.0 17 4520.0 18 4906.0 19 5114.0 20 5322.0 21 6027.0 22 6732.0 23 6923.5 24 7115.0 25 8300.5 26 9486.0 27 11437.0 28 13388.0 29 15173.0 30 16958.0 31 18135.5 32 19313.0 33 22476.0 34 25639.0 35 29086.5 36 32534.0 37 38376.0 38 44218.0 39 46884.0 40 49550.0 41 54275.5 42 59001.0 43 60140.5 44 61280.0 45 66829.0 46 72378.0 47 76582.0 48 80786.0 49 81388.5 50 81991.0 51 78613.5 52 75236.0 53 73825.0 54 72414.0 55 72863.5 56 73313.0 57 71626.5 58 69940.0 59 63905.0 60 57870.0 61 51178.5 62 44487.0 63 39239.0 64 33991.0 65 29105.5 66 24220.0 67 21664.5 68 19109.0 69 17404.0 70 15699.0 71 12439.5 72 9180.0 73 8156.5 74 7133.0 75 5370.5 76 3608.0 77 3182.5 78 2757.0 79 2327.5 80 1898.0 81 1495.5 82 1093.0 83 930.0 84 767.0 85 609.0 86 451.0 87 348.5 88 246.0 89 155.0 90 64.0 91 45.0 92 26.0 93 18.0 94 10.0 95 9.0 96 8.0 97 6.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014452761015966261 2 0.004398666396163644 3 6.283809137376635E-4 4 8.976870196252336E-5 5 0.0 6 4.488435098126168E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.976870196252336E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1113974.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.19188068923001 #Duplication Level Percentage of deduplicated Percentage of total 1 82.52759626348896 48.849636315973825 2 11.103650630957791 13.144919267250943 3 2.783047398126728 4.942014286271679 4 1.106829530183985 2.620612859758678 5 0.5775615907666236 1.709347838566994 6 0.36914299341319906 1.3110160814027578 7 0.25437559939773774 1.0539879090861584 8 0.19542966742660461 0.9254279645961184 9 0.13426604606540157 0.7152713801386119 >10 0.7690412727357375 8.62424061544719 >50 0.08840318749996967 3.7355499227007707 >100 0.08425658714954756 9.738773218765093 >500 0.005789782046150048 2.2455496540557007 >1k 6.09450741700005E-4 0.38365268598549945 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 8.976870196252336E-5 0.0 9 0.0 0.0 0.0 8.976870196252336E-5 0.0 10 0.0 0.0 0.0 8.976870196252336E-5 0.0 11 0.0 0.0 0.0 8.976870196252336E-5 0.0 12 0.0 0.0 0.0 8.976870196252336E-5 8.976870196252336E-5 13 0.0 0.0 0.0 8.976870196252336E-5 8.976870196252336E-5 14 0.0 0.0 0.0 8.976870196252336E-5 8.976870196252336E-5 15 0.0 0.0 0.0 1.7953740392504672E-4 8.976870196252336E-5 16 0.0 0.0 0.0 1.7953740392504672E-4 8.976870196252336E-5 17 0.0 0.0 0.0 1.7953740392504672E-4 8.976870196252336E-5 18 0.0 0.0 0.0 2.6930610588757006E-4 8.976870196252336E-5 19 0.0 0.0 0.0 3.5907480785009343E-4 8.976870196252336E-5 20 0.0 0.0 0.0 3.5907480785009343E-4 8.976870196252336E-5 21 0.0 0.0 0.0 5.386122117751401E-4 8.976870196252336E-5 22 0.0 0.0 0.0 0.0016158366353254206 8.976870196252336E-5 23 0.0 0.0 0.0 0.002782829760838224 8.976870196252336E-5 24 0.0 0.0 0.0 0.005296353415788878 8.976870196252336E-5 25 0.0 0.0 0.0 0.006553115243264206 8.976870196252336E-5 26 0.0 0.0 0.0 0.009156407600177384 1.7953740392504672E-4 27 1.7953740392504672E-4 0.0 0.0 0.012747155678678318 1.7953740392504672E-4 28 1.7953740392504672E-4 0.0 0.0 0.02477616174165645 1.7953740392504672E-4 29 1.7953740392504672E-4 0.0 0.0 0.049193248675462806 1.7953740392504672E-4 30 1.7953740392504672E-4 0.0 0.0 0.09515482408027476 1.7953740392504672E-4 31 1.7953740392504672E-4 0.0 0.0 0.19282317181550018 1.7953740392504672E-4 32 1.7953740392504672E-4 0.0 0.0 0.30790664773145515 1.7953740392504672E-4 33 1.7953740392504672E-4 0.0 0.0 0.41868122595320895 1.7953740392504672E-4 34 1.7953740392504672E-4 0.0 0.0 0.5406768919202782 1.7953740392504672E-4 35 1.7953740392504672E-4 0.0 0.0 0.6824216723191026 1.7953740392504672E-4 36 1.7953740392504672E-4 0.0 0.0 0.8796435105307664 1.7953740392504672E-4 37 2.6930610588757006E-4 0.0 0.0 1.1611581598852396 1.7953740392504672E-4 38 2.6930610588757006E-4 0.0 0.0 1.525349783747197 1.7953740392504672E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGAAT 45 0.0013981612 24.444395 35 TGCGTAG 65 4.931898E-4 20.30765 13 CTAGCGG 375 0.0 19.946627 29 TAGCGGC 390 0.0 19.17945 30 CGAATGC 380 0.0 19.105223 43 TCTAGCG 395 0.0 18.93667 28 CCCCTAT 105 1.7916955E-6 18.85795 1 TTAACGG 140 4.0799932E-9 18.857105 35 ATTTCGT 140 4.0799932E-9 18.857105 42 CGCAATA 380 0.0 18.526278 36 ATCGTTT 300 0.0 18.333294 29 ATAACGC 315 0.0 18.158693 3 ATACGAA 400 0.0 18.149963 40 GGCGAAT 85 1.4307276E-4 18.117609 37 AATAACG 305 0.0 18.033562 2 TAACGCC 305 0.0 18.032751 4 TCTACAC 285 0.0 17.754349 3 TAGTACG 75 0.0012904137 17.600754 2 CATCGTT 325 0.0 17.599964 28 TAACGGC 150 9.59335E-9 17.599962 36 >>END_MODULE