##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062640_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1876736 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.191680129757195 32.0 32.0 32.0 32.0 32.0 2 30.954091038910107 32.0 32.0 32.0 32.0 32.0 3 30.952024685411267 32.0 32.0 32.0 32.0 32.0 4 30.97844822074069 32.0 32.0 32.0 32.0 32.0 5 30.886258376244715 32.0 32.0 32.0 32.0 32.0 6 34.46416437900696 36.0 36.0 36.0 32.0 36.0 7 34.355648849918154 36.0 36.0 36.0 32.0 36.0 8 34.37205819039013 36.0 36.0 36.0 32.0 36.0 9 34.46663995362161 36.0 36.0 36.0 32.0 36.0 10 34.24895296941072 36.0 36.0 36.0 32.0 36.0 11 34.44677194874505 36.0 36.0 36.0 32.0 36.0 12 34.2735451336789 36.0 36.0 36.0 32.0 36.0 13 34.40472181489565 36.0 36.0 36.0 32.0 36.0 14 34.32210230954167 36.0 36.0 36.0 32.0 36.0 15 34.28382148581367 36.0 36.0 36.0 32.0 36.0 16 34.27032091887192 36.0 36.0 36.0 32.0 36.0 17 34.192044592313465 36.0 36.0 36.0 32.0 36.0 18 34.208691046583006 36.0 36.0 36.0 32.0 36.0 19 34.192906727424635 36.0 36.0 36.0 32.0 36.0 20 34.1851853430637 36.0 36.0 36.0 32.0 36.0 21 34.149512238269 36.0 36.0 36.0 32.0 36.0 22 34.121608473434726 36.0 36.0 36.0 32.0 36.0 23 34.107217530862094 36.0 36.0 36.0 32.0 36.0 24 34.0768264689333 36.0 36.0 36.0 32.0 36.0 25 33.60319885162324 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 8.0 4 76.0 5 187.0 6 294.0 7 78.0 8 279.0 9 359.0 10 232.0 11 57.0 12 132.0 13 109.0 14 417.0 15 546.0 16 798.0 17 1142.0 18 1526.0 19 1970.0 20 2668.0 21 3682.0 22 4988.0 23 6859.0 24 9366.0 25 12973.0 26 18296.0 27 24144.0 28 33101.0 29 45287.0 30 59591.0 31 83426.0 32 123778.0 33 185848.0 34 438964.0 35 815554.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.47880121049157 17.968254171256103 11.055993494593661 25.496951123658672 2 17.4635272878604 20.171132272628693 35.98845192859507 26.376888510915837 3 18.83791305849121 23.962814411493728 28.16052723989298 29.038745290122087 4 12.206906034066527 14.970588015855505 36.11310956989969 36.70939638017827 5 14.713603367008032 36.31537343417443 33.007584403068726 15.96343879574881 6 34.38461874711471 35.51474656883598 16.67306361660094 13.427571067448374 7 30.753649075567523 30.438368946533544 20.67550887108599 18.13247310681294 8 28.55042358531571 31.453042961177346 19.799100297856338 20.197433155650604 9 26.994110763723327 14.337106241993103 19.31996974846209 39.34881324582148 10 16.301170214582015 25.444645265368138 30.54006128476075 27.714123235289094 11 37.9234370990621 21.344606673420426 21.89707075605318 18.83488547146429 12 25.00542879475421 24.316305325020743 27.48858886016652 23.18967702005853 13 28.284807047194693 18.84074671583314 26.181467824127424 26.69297841284474 14 23.422692864379407 20.673618887619753 24.440504840715466 31.46318340728537 15 25.198308761006338 27.33305522985679 22.17724082231855 25.29139518681832 16 26.445949463783514 25.88034029369215 23.420583202106457 24.253127040417876 17 23.89659554444934 26.227815875366645 24.9904770847182 24.88511149546581 18 25.465716887882746 23.997404843829116 26.544008545234625 23.992869723053513 19 25.287915012450306 25.32990511943171 25.339242182610544 24.042937685507436 20 25.288582139677118 24.18701648453951 24.85943674400069 25.664964631782688 21 27.425943996956715 24.105701836054276 24.049253824512842 24.41910034247617 22 25.641861676354004 24.377402712169758 25.00453593635601 24.976199675120228 23 23.563924610210584 24.005830900678866 25.98667237946955 26.443572109640996 24 24.24009437561259 25.610856396791615 25.12724007356688 25.02180915402892 25 24.459159593204568 24.719902638856208 25.17618963014183 25.64474813779739 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 288.0 1 288.0 2 655.0 3 1022.0 4 1022.0 5 1022.0 6 2801.0 7 4580.0 8 4580.0 9 4580.0 10 4859.5 11 5139.0 12 5139.0 13 5139.0 14 5721.0 15 6303.0 16 6303.0 17 6303.0 18 9867.0 19 13431.0 20 13431.0 21 13431.0 22 22003.5 23 30576.0 24 30576.0 25 30576.0 26 45665.5 27 60755.0 28 60755.0 29 60755.0 30 71339.5 31 81924.0 32 81924.0 33 81924.0 34 102834.5 35 123745.0 36 123745.0 37 123745.0 38 135678.5 39 147612.0 40 147612.0 41 147612.0 42 165896.0 43 184180.0 44 184180.0 45 184180.0 46 214965.5 47 245751.0 48 245751.0 49 245751.0 50 242827.5 51 239904.0 52 239904.0 53 239904.0 54 217167.0 55 194430.0 56 194430.0 57 194430.0 58 183082.5 59 171735.0 60 171735.0 61 171735.0 62 156794.5 63 141854.0 64 141854.0 65 141854.0 66 119738.0 67 97622.0 68 97622.0 69 97622.0 70 74098.0 71 50574.0 72 50574.0 73 50574.0 74 41369.5 75 32165.0 76 32165.0 77 32165.0 78 28709.5 79 25254.0 80 25254.0 81 25254.0 82 17697.5 83 10141.0 84 10141.0 85 10141.0 86 7542.0 87 4943.0 88 4943.0 89 4943.0 90 3348.0 91 1753.0 92 1753.0 93 1753.0 94 995.0 95 237.0 96 237.0 97 237.0 98 527.5 99 818.0 100 818.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007619611921975173 2 0.003143755967807939 3 0.005061979948165325 4 0.015452359841767837 5 0.03458131564588733 6 0.04486512754058109 7 0.06719112331196289 8 0.08903756308825536 9 0.09537835902332562 10 0.11765107079525303 11 0.11855689878597735 12 0.13166476265175284 13 0.12191379075160277 14 0.1237787307325058 15 0.11370805483562953 16 0.11296207884326831 17 0.12308603873959897 18 0.1318778986495703 19 0.13241073864411404 20 0.12324589073796208 21 0.13027937866593917 22 0.14983460646569363 23 0.1376325705906425 24 0.13443553062338018 25 0.13198446664847907 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1876736.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.013216383505466 #Duplication Level Percentage of deduplicated Percentage of total 1 80.00967463199716 32.81454098455967 2 12.25400396451675 10.051522323221187 3 3.3501900188709475 4.122062045094433 4 1.346943806008004 2.2096999108891464 5 0.698572101182185 1.4325344372632514 6 0.4264800906988468 1.0494792145853304 7 0.2963406961503241 0.8507719566116321 8 0.21296953501594823 0.6987652498162902 9 0.17238205698980738 0.6362948343561066 >10 0.9222615401316435 7.090335923045821 >50 0.11206001575966319 3.2612559284625897 >100 0.14719469202857882 13.2001756544252 >500 0.03156945078569737 8.875052663193816 >1k 0.019357399864481102 13.70750887447561 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 4352 0.23189196562542627 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 4061 0.21638632178420406 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3930 0.20940611785568133 No Hit GAATAGGACCGCGGTTCTATTTTGT 3905 0.20807401786932206 No Hit GTATCAACGCAGAGTACTTTTTTTT 3705 0.1974172179784477 No Hit GAACTACGACGGTATCTGATCGTCT 3596 0.19160926203792117 No Hit GTATCTGATCGTCTTCGAACCTCCG 3557 0.18953118605920066 No Hit GTCCTATTCCATTATTCCTAGCTGC 3429 0.18271083412904107 No Hit GAATAACGCCGCCGCATCGCCAGTC 3396 0.18095246214704677 No Hit GGGTAGGCACACGCTGAGCCAGTCA 3378 0.1799933501568681 No Hit CTATTGGAGCTGGAATTACCGCGGC 3050 0.16251619833583414 No Hit GATTAAGAGGGACGGCCGGGGGCAT 3043 0.1621432103396535 No Hit ATCAGATACCGTCGTAGTTCCGACC 2879 0.15340463442913654 No Hit GTACATGGGGAATAATTGCAATCCC 2818 0.15015431046241987 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 2813 0.149887890465148 No Hit TCGTAGTTCCGACCATAAACGATGC 2798 0.14908863047333243 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 2761 0.14711712249352066 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 2748 0.14642443050061382 No Hit GCTTTGAACACTCTAATTTTTTCAA 2666 0.14205514254535534 No Hit CTCTTAATCATGGCCTCAGTTCCGA 2655 0.14146901855135724 No Hit GTACATGGAAGCAGTGGTATCAACG 2648 0.14109603055517667 No Hit TATCAACGCAGAGTACTTTTTTTTT 2645 0.14093617855681354 No Hit CTTTAATATACGCTATTGGAGCTGG 2606 0.13885810257809303 No Hit GTCCTGTATTGTTATTTTTCGTCAC 2570 0.13693987859773565 No Hit TCCATGTACTCTGCGTTGATACCAC 2420 0.12894727867957986 No Hit GAATAATGGAATAGGACCGCGGTTC 2350 0.12521739871777382 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 2300 0.12255319874505526 No Hit ACCATACTCCCCCCGGAACCCAAAG 2270 0.12095467876142409 No Hit GGATTGACAGATTGATAGCTCTTTC 2205 0.11749121879688991 No Hit ACCCCCGAGCGGTCGGCGTCCCCCA 2205 0.11749121879688991 No Hit ATACAGGACTCTTTCGAGGCCCTGT 2200 0.11722479879961807 No Hit GCCATGCACCACCACCCACGGAATC 2174 0.1158394148138044 No Hit CATCTAAGGGCATCACAGACCTGTT 2154 0.11477373482471696 No Hit GAATAATTGCAATCCCCGATCCCCA 2141 0.11408104283181011 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2117 0.1128022268449052 No Hit CTCTAGATAACCTCGGGCCGATCGC 2097 0.11173654685581777 No Hit GAGTATGGTTGCAAAGCTGAAACTT 2070 0.11029787887054973 No Hit ATATTAAAGTTGCTGCAGTTAAAAA 2065 0.11003145887327787 No Hit GTTCTATTTTGTTGGTTTTCGGAAC 2033 0.10832637089073795 No Hit CTCCCGACCCGGGGAGGTAGTGACG 1998 0.10646143090983495 No Hit GGTCGGGAGTGGGTAATTTGCGCGC 1969 0.10491619492565817 No Hit GTTATTGCTCAATCTCGGGTGGCTG 1959 0.10438335493111445 No Hit ACCTCGGGCCGATCGCACGCCCCCC 1959 0.10438335493111445 No Hit CTTTAAATCCTTTAACGAGGATCCA 1922 0.10241184695130269 No Hit GCCCCGGACATCTAAGGGCATCACA 1921 0.10235856295184832 No Hit GTACATGGGTACCTGGTTGATCCTG 1891 0.10076004296821715 No Hit CCATTATTCCTAGCTGCGGTATCCA 1881 0.10022720297367343 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.065679989087437E-4 0.0 8 0.0 0.0 0.0 1.065679989087437E-4 5.328399945437185E-5 9 0.0 0.0 0.0 1.065679989087437E-4 5.328399945437185E-5 10 0.0 0.0 0.0 1.065679989087437E-4 5.328399945437185E-5 11 0.0 0.0 0.0 1.065679989087437E-4 5.328399945437185E-5 12 0.0 0.0 0.0 1.065679989087437E-4 2.131359978174874E-4 13 0.0 0.0 0.0 1.065679989087437E-4 2.664199972718592E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCAGT 565 0.0 13.959398 18 ATCGCCA 575 0.0 13.8815155 16 CGCATCG 585 0.0 13.804815 13 TCGCCAG 575 0.0 13.716626 17 CAAGACG 670 0.0 13.467557 4 ATTGTCG 85 2.6993257E-7 13.412047 6 CATCGCC 590 0.0 13.367186 15 AAGACGG 670 0.0 13.1843815 5 GCACCGA 65 5.452577E-5 13.154123 6 GCATCGC 615 0.0 13.132111 14 CGGTCCA 800 0.0 12.707195 10 CACCGGT 60 4.0919957E-4 12.666934 7 AGAATTT 815 0.0 12.592247 17 CGCAAGA 670 0.0 12.471884 2 CCGCATC 640 0.0 12.471008 12 AACCGCG 290 0.0 12.448538 7 TGCACCG 130 1.9826984E-10 12.421019 5 TGTCGAT 100 1.4426405E-7 12.35026 8 AGGCCCG 720 0.0 12.271748 10 GAATTTC 870 0.0 12.233081 18 >>END_MODULE