##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062639_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1142968 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.163567133988003 32.0 32.0 32.0 32.0 32.0 2 31.127851348419203 32.0 32.0 32.0 32.0 32.0 3 31.307908882838365 32.0 32.0 32.0 32.0 32.0 4 31.477822651202832 32.0 32.0 32.0 32.0 32.0 5 31.34062195966991 32.0 32.0 32.0 32.0 32.0 6 34.93829486039854 36.0 36.0 36.0 36.0 36.0 7 34.954360926990084 36.0 36.0 36.0 36.0 36.0 8 34.876218756780595 36.0 36.0 36.0 32.0 36.0 9 35.07289792890089 36.0 36.0 36.0 36.0 36.0 10 34.87424757298542 36.0 36.0 36.0 32.0 36.0 11 35.072590833689134 36.0 36.0 36.0 36.0 36.0 12 34.952488608604966 36.0 36.0 36.0 32.0 36.0 13 35.017444932841514 36.0 36.0 36.0 36.0 36.0 14 34.97234480755367 36.0 36.0 36.0 32.0 36.0 15 34.90738935823225 36.0 36.0 36.0 32.0 36.0 16 34.934936061202066 36.0 36.0 36.0 32.0 36.0 17 34.9080779164421 36.0 36.0 36.0 32.0 36.0 18 34.92991054867678 36.0 36.0 36.0 32.0 36.0 19 34.90367796823708 36.0 36.0 36.0 32.0 36.0 20 34.90104447368605 36.0 36.0 36.0 32.0 36.0 21 34.89673026716409 36.0 36.0 36.0 32.0 36.0 22 34.8798864010191 36.0 36.0 36.0 32.0 36.0 23 34.82891472027213 36.0 36.0 36.0 32.0 36.0 24 34.79874239698749 36.0 36.0 36.0 32.0 36.0 25 34.76957622610607 36.0 36.0 36.0 32.0 36.0 26 34.71153085650692 36.0 36.0 36.0 32.0 36.0 27 34.70617287623101 36.0 36.0 36.0 32.0 36.0 28 34.67167672235793 36.0 36.0 36.0 32.0 36.0 29 34.65314601983608 36.0 36.0 36.0 32.0 36.0 30 34.634726431536144 36.0 36.0 36.0 32.0 36.0 31 34.63788400025197 36.0 36.0 36.0 32.0 36.0 32 34.60047175423984 36.0 36.0 36.0 32.0 36.0 33 34.57961990186952 36.0 36.0 36.0 32.0 36.0 34 34.566693905691146 36.0 36.0 36.0 32.0 36.0 35 34.542437758537424 36.0 36.0 36.0 32.0 36.0 36 34.50237451967159 36.0 36.0 36.0 32.0 36.0 37 34.49795007384284 36.0 36.0 36.0 32.0 36.0 38 34.45085339222096 36.0 36.0 36.0 32.0 36.0 39 34.43553800281373 36.0 36.0 36.0 32.0 36.0 40 34.4328730113179 36.0 36.0 36.0 32.0 36.0 41 34.398963925499224 36.0 36.0 36.0 32.0 36.0 42 34.36935767230579 36.0 36.0 36.0 32.0 36.0 43 34.36486760784204 36.0 36.0 36.0 32.0 36.0 44 34.32420242736455 36.0 36.0 36.0 32.0 36.0 45 34.27599285369319 36.0 36.0 36.0 32.0 36.0 46 34.28903083900862 36.0 36.0 36.0 32.0 36.0 47 34.27124381435001 36.0 36.0 36.0 32.0 36.0 48 34.237660196960896 36.0 36.0 36.0 32.0 36.0 49 34.223393830798415 36.0 36.0 36.0 32.0 36.0 50 33.61928592926486 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 19.0 22 78.0 23 273.0 24 724.0 25 1774.0 26 3632.0 27 6920.0 28 11859.0 29 19269.0 30 29508.0 31 44380.0 32 68278.0 33 115505.0 34 244866.0 35 595879.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.81697419621864 17.796987619190123 11.084714350591565 26.301323833999668 2 16.559281282045 20.670928250697333 36.482915749428656 26.286874717829008 3 19.09321490409559 24.1705535009506 28.715327994568497 28.020903600385317 4 12.786568267619744 15.73617739825804 36.20784538459183 35.26940894953039 5 14.821062356951376 36.22489868482757 33.37101301173786 15.583025946483192 6 34.48087302608037 35.601990258686385 16.465042297809124 13.452094417424126 7 29.754201342469784 30.306447774565864 21.148798566539046 18.79055231642531 8 27.954675896438047 33.06759244353298 19.67404161796306 19.30369004206592 9 27.49114585885169 13.571246089129355 18.367793324047568 40.56981472797139 10 15.711026030475045 26.721745490687404 31.843848646681273 25.72337983215628 11 38.21568057898384 20.720527608821946 22.19274730351156 18.871044508682658 12 24.598763919899767 23.278429492339242 29.18611894646219 22.936687641298796 13 29.861290954777388 19.37823281141729 25.104902324474526 25.65557390933079 14 23.24369536154993 19.923567413960846 24.767535049100236 32.06520217538898 15 25.14856058962281 27.688001763828908 21.95459540424579 25.2088422423025 16 25.8568918814875 25.522761792106163 24.115723274842342 24.504623051563996 17 24.150894863198268 25.74350288022062 25.297733619838876 24.807868636742235 18 25.072967922111555 24.513197219869674 26.54300032896809 23.870834529050683 19 25.761613623478524 24.90559665712426 24.848289715897558 24.484500003499658 20 25.64743719859174 24.484325020473012 24.952579599778822 24.915658181156427 21 26.79121375226603 24.289568911815554 23.92122964072485 24.997987695193565 22 25.706756444624872 24.938493466133785 24.569279279909846 24.785470809331496 23 24.40129557432929 24.443903941317693 25.279710368094293 25.875090116258725 24 24.95537932820516 25.09659063070882 25.063343855646004 24.884686185440014 25 25.0878414793765 24.625098865410056 25.1157512721266 25.17130838308684 26 24.332877210910542 25.557583414408803 25.598791917184034 24.510747457496624 27 25.351803375072617 24.933068992307746 24.79054531710424 24.924582315515394 28 24.208726753504912 25.032021893876294 25.306920228737813 25.452331123880985 29 24.40488272637554 24.952404616752176 25.282422605007316 25.36029005186497 30 24.330514940050815 25.197905803137093 25.589167850718482 24.88241140609361 31 25.00988654100552 24.926419637295183 24.540757046566483 25.52293677513281 32 24.705503566154082 25.088453919969762 24.639184999055093 25.566857514821063 33 24.213276312197717 24.64268465958802 25.690308040120108 25.453730988094154 34 25.081192124363938 24.818455109854344 25.685321023860684 24.415031741921034 35 25.549446703669744 24.68739282289618 25.448918954861377 24.3142415185727 36 24.430955197345856 25.412260010778954 25.053807280693775 25.102977511181418 37 25.305345381497997 25.021347929250865 24.750561695515536 24.922744993735606 38 24.557467925611213 24.836128395545632 25.253550405610653 25.352853273232494 39 25.170170993413638 24.33095239761743 24.94243058423333 25.556446024735603 40 25.723817289722895 24.577328499135582 25.445681768868422 24.2531724422731 41 24.40287042156911 24.709703158793598 26.077807952628596 24.8096184670087 42 25.743852846273914 25.351540900532648 25.237539458672508 23.66706679452093 43 24.480737868426765 24.33970154894975 25.71655549411707 25.463005088506414 44 24.06331585836174 24.93508129711418 25.392049471201293 25.609553373322786 45 24.27145816855765 25.25722504917023 25.40088611404694 25.07043066822518 46 24.115261622184406 24.525685388441467 25.739370846876326 25.6196821424978 47 24.636756791753392 24.243657078463333 26.077743276927507 25.041842852855765 48 24.920470214389205 25.251888066857514 25.034996605329283 24.792645113423998 49 24.060778604475367 25.028784707883332 25.586630596832105 25.323806090809192 50 23.91766341460427 25.669944976539128 25.11866046876244 25.29373114009416 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 8.0 2 13.0 3 30.5 4 48.0 5 81.0 6 114.0 7 101.0 8 88.0 9 132.5 10 177.0 11 257.0 12 337.0 13 563.0 14 789.0 15 1118.5 16 1448.0 17 1820.0 18 2192.0 19 2493.0 20 2794.0 21 3466.5 22 4139.0 23 4719.5 24 5300.0 25 6685.0 26 8070.0 27 10336.5 28 12603.0 29 14822.5 30 17042.0 31 18971.0 32 20900.0 33 24527.5 34 28155.0 35 32740.5 36 37326.0 37 42431.0 38 47536.0 39 49774.5 40 52013.0 41 55220.5 42 58428.0 43 59027.0 44 59626.0 45 65540.5 46 71455.0 47 76520.0 48 81585.0 49 83677.0 50 85769.0 51 81646.0 52 77523.0 53 76482.0 54 75441.0 55 76466.0 56 77491.0 57 76264.0 58 75037.0 59 68749.5 60 62462.0 61 55059.5 62 47657.0 63 41605.0 64 35553.0 65 30729.0 66 25905.0 67 22928.0 68 19951.0 69 18603.0 70 17255.0 71 13465.0 72 9675.0 73 8869.0 74 8063.0 75 6013.5 76 3964.0 77 3592.0 78 3220.0 79 2762.5 80 2305.0 81 1862.0 82 1419.0 83 1202.5 84 986.0 85 811.5 86 637.0 87 473.0 88 309.0 89 202.5 90 96.0 91 71.5 92 47.0 93 31.5 94 16.0 95 8.5 96 1.0 97 2.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013211218511804354 2 0.003849626586221137 3 6.124405932624535E-4 4 2.6247453996962295E-4 5 0.0 6 8.749151332320765E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.6247453996962295E-4 47 8.749151332320765E-5 48 0.0 49 0.0 50 8.749151332320765E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1142968.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.77992462862451 #Duplication Level Percentage of deduplicated Percentage of total 1 83.37667622499708 50.6762809674055 2 10.71082523991688 13.020063015850338 3 2.6528769316301632 4.8372497986049385 4 1.0529670892551304 2.5599704128539584 5 0.5501485068668416 1.6718992390958471 6 0.33142078399919295 1.2086238163098353 7 0.23109532902660695 0.9832169676185045 8 0.15902790893119442 0.7732563454948607 9 0.10963741047744317 0.5997378190766907 >10 0.6692169364155318 7.548046155302765 >50 0.07438812313540213 3.142385365705637 >100 0.07390915713699882 9.293387509874313 >500 0.006653268106101555 2.8098613127768335 >1k 0.0011570901054089662 0.876021274030008 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1442 0.12616276221206543 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1358 0.118813475092916 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1302 0.11391395034681635 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1271 0.11120171343379692 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1199 0.10490232447452597 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1164 0.1018401215082137 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1144 0.10009029124174953 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6247453996962295E-4 2 0.0 0.0 0.0 0.0 2.6247453996962295E-4 3 0.0 0.0 0.0 0.0 2.6247453996962295E-4 4 0.0 0.0 0.0 0.0 2.6247453996962295E-4 5 0.0 0.0 0.0 0.0 3.499660532928306E-4 6 0.0 0.0 0.0 0.0 4.3745756661603825E-4 7 0.0 0.0 0.0 0.0 4.3745756661603825E-4 8 0.0 0.0 0.0 0.0 4.3745756661603825E-4 9 0.0 0.0 0.0 0.0 4.3745756661603825E-4 10 0.0 0.0 0.0 0.0 4.3745756661603825E-4 11 0.0 0.0 0.0 0.0 4.3745756661603825E-4 12 0.0 0.0 0.0 0.0 9.624066465552841E-4 13 0.0 0.0 0.0 0.0 0.0010498981598784918 14 0.0 0.0 0.0 0.0 0.0010498981598784918 15 0.0 0.0 0.0 0.0 0.0015748472398177376 16 0.0 0.0 0.0 0.0 0.0016623387531409454 17 0.0 0.0 0.0 0.0 0.0016623387531409454 18 0.0 0.0 0.0 0.0 0.001749830266464153 19 0.0 0.0 0.0 0.0 0.0018373217797873606 20 0.0 0.0 0.0 0.0 0.0018373217797873606 21 0.0 0.0 0.0 8.749151332320765E-5 0.0018373217797873606 22 0.0 0.0 0.0 2.6247453996962295E-4 0.0018373217797873606 23 0.0 0.0 0.0 4.3745756661603825E-4 0.002012304806433776 24 0.0 0.0 0.0 0.0010498981598784918 0.002012304806433776 25 0.0 0.0 0.0 0.0013123726998481148 0.0020997963197569836 26 0.0 0.0 0.0 0.0019248132931105682 0.002274779346403399 27 0.0 0.0 0.0 0.003324677506281891 0.0023622708597266064 28 0.0 0.0 0.0 0.009011625872290388 0.002449762373049814 29 0.0 0.0 0.0 0.019948065037691344 0.002449762373049814 30 0.0 0.0 0.0 0.042958333041694954 0.002449762373049814 31 0.0 0.0 0.0 0.08775398786317727 0.002449762373049814 32 0.0 0.0 0.0 0.14926052172939225 0.002449762373049814 33 0.0 0.0 0.0 0.2161040379083229 0.002449762373049814 34 0.0 0.0 0.0 0.28775958732002993 0.002537253886373022 35 0.0 0.0 0.0 0.37192642313695573 0.002537253886373022 36 0.0 0.0 0.0 0.48531542440383285 0.002537253886373022 37 0.0 0.0 0.0 0.6546989941975628 0.002537253886373022 38 0.0 0.0 0.0 0.8875139111506184 0.002712236913019437 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAACG 55 0.0044835415 19.99994 4 GATTTCG 335 0.0 19.701433 41 GTCCTAC 660 0.0 19.66919 1 GTCCTAA 350 0.0 19.488214 1 TCCTACA 665 0.0 19.187912 2 TTAGAAC 185 1.8189894E-12 19.026972 3 TTAACGG 140 4.0799932E-9 18.857086 35 TACACGG 70 8.123117E-4 18.857086 5 TAGGACG 570 0.0 18.52626 4 GACTGCG 95 1.5970269E-5 18.52626 7 ATAACCG 60 0.0074119885 18.333279 5 ATAACGC 410 0.0 18.243849 3 TAACGCC 415 0.0 18.024042 4 CGTGATC 75 0.0012908381 17.599947 38 ATAGCAC 125 4.8520633E-7 17.599947 3 ACGTGAT 75 0.0012908381 17.599947 37 AATAACG 440 0.0 17.499949 2 TAGCACT 190 3.274181E-11 17.36837 4 ATTTCGT 355 0.0 17.352062 42 GATATAC 305 0.0 17.313696 1 >>END_MODULE