##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062638_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109149 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.285361119200395 32.0 32.0 32.0 32.0 32.0 2 31.446801106073213 32.0 32.0 32.0 32.0 32.0 3 31.526145720728234 32.0 32.0 32.0 32.0 32.0 4 31.61131462048832 32.0 32.0 32.0 32.0 32.0 5 31.57290589451913 32.0 32.0 32.0 32.0 32.0 6 35.15477451631837 36.0 36.0 36.0 36.0 36.0 7 35.16158784798075 36.0 36.0 36.0 36.0 36.0 8 35.11751532030412 36.0 36.0 36.0 36.0 36.0 9 35.24173307643969 36.0 36.0 36.0 36.0 36.0 10 35.14045993820488 36.0 36.0 36.0 36.0 36.0 11 35.24666658852868 36.0 36.0 36.0 36.0 36.0 12 35.179117503599606 36.0 36.0 36.0 36.0 36.0 13 35.203187308468024 36.0 36.0 36.0 36.0 36.0 14 35.17791027174888 36.0 36.0 36.0 36.0 36.0 15 35.151336745558986 36.0 36.0 36.0 36.0 36.0 16 35.16497062162072 36.0 36.0 36.0 36.0 36.0 17 35.160893622047176 36.0 36.0 36.0 36.0 36.0 18 35.159478122416374 36.0 36.0 36.0 36.0 36.0 19 35.14904579997818 36.0 36.0 36.0 36.0 36.0 20 35.129622800904116 36.0 36.0 36.0 36.0 36.0 21 35.11879918748518 36.0 36.0 36.0 36.0 36.0 22 35.099875670446444 36.0 36.0 36.0 36.0 36.0 23 35.07096431588542 36.0 36.0 36.0 36.0 36.0 24 35.06531223487557 36.0 36.0 36.0 36.0 36.0 25 35.04114505805803 36.0 36.0 36.0 36.0 36.0 26 35.004211336799656 36.0 36.0 36.0 36.0 36.0 27 34.98213585370406 36.0 36.0 36.0 36.0 36.0 28 34.960915981531784 36.0 36.0 36.0 36.0 36.0 29 34.94563129029553 36.0 36.0 36.0 36.0 36.0 30 34.920099103005995 36.0 36.0 36.0 36.0 36.0 31 34.907392965237314 36.0 36.0 36.0 36.0 36.0 32 34.879292141993545 36.0 36.0 36.0 36.0 36.0 33 34.86965412221442 36.0 36.0 36.0 36.0 36.0 34 34.848277373013005 36.0 36.0 36.0 36.0 36.0 35 34.82914829297056 36.0 36.0 36.0 36.0 36.0 36 34.78548148174862 36.0 36.0 36.0 32.0 36.0 37 34.77141303828431 36.0 36.0 36.0 32.0 36.0 38 34.73891515026385 36.0 36.0 36.0 32.0 36.0 39 34.69815597363384 36.0 36.0 36.0 32.0 36.0 40 34.691186666534435 36.0 36.0 36.0 32.0 36.0 41 34.65114155086467 36.0 36.0 36.0 32.0 36.0 42 34.64810408700725 36.0 36.0 36.0 32.0 36.0 43 34.61777723281543 36.0 36.0 36.0 32.0 36.0 44 34.58977558470503 36.0 36.0 36.0 32.0 36.0 45 34.55372993168636 36.0 36.0 36.0 32.0 36.0 46 34.49969120469838 36.0 36.0 36.0 32.0 36.0 47 34.4803304154807 36.0 36.0 36.0 32.0 36.0 48 34.43215925001961 36.0 36.0 36.0 32.0 36.0 49 34.39012071416915 36.0 36.0 36.0 32.0 36.0 50 33.879209195518364 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 5.0 21 31.0 22 87.0 23 281.0 24 685.0 25 1596.0 26 3374.0 27 6289.0 28 10730.0 29 16772.0 30 24566.0 31 35142.0 32 50732.0 33 80123.0 34 170191.0 35 708541.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.45469202697621 21.115947400171507 12.898283733567062 24.531076839285216 2 12.936266284614808 23.14626557232492 42.655975706406736 21.261492436653537 3 17.432558290499962 28.30996544178704 30.73886775645701 23.518608511255987 4 10.697158622181952 18.574126917580656 40.39958706931916 30.32912739091823 5 11.026922442340929 40.642330291060986 35.777429362511256 12.553317904086828 6 28.301129791199152 39.847341596169294 19.825216405819628 12.026312206811927 7 26.061445361664994 33.67043893150418 23.385337213789324 16.882778493041506 8 24.14887449747509 38.370768940872686 21.645243335205638 15.835113226446582 9 26.959678095548927 15.544439926466147 21.467359209628285 36.02852276835664 10 13.663267964899214 31.13621343931248 35.52155751842178 19.678961077366523 11 32.7701688411566 23.760107974672472 25.777510505802198 17.692212678368733 12 22.45622544851954 26.908197185409716 33.174082111600875 17.46149525446987 13 28.146263486691147 23.89318297180992 26.944351029482966 21.01620251201597 14 20.108209086425717 23.758935904914487 29.622981222540883 26.50987378611891 15 21.412452249427265 33.33140993680741 24.960938521334825 20.295199292430503 16 19.904359107748373 30.332444062970797 29.804922512665115 19.95827431661571 17 19.414253630486076 30.5659564224464 29.42679477689652 20.592995170171005 18 19.312824516814242 29.45771938666491 32.35146945991927 18.877986636601573 19 21.919417499362122 28.126428460017543 29.771743922592908 20.182410118027423 20 22.67819742883959 28.667113255297526 30.10416093780006 18.550528378062822 21 22.404113423895254 28.024999346345712 28.357506520765018 21.213380708994013 22 21.757130917487192 30.017247457284817 29.09365648799215 19.131965137235845 23 20.55422670894533 29.832601390796004 29.48765224509962 20.125519655159046 24 21.03829151899339 28.765296637331865 30.500681152847815 19.69573069082693 25 20.71984918166991 29.267753926659086 30.14761767805768 19.86477921361332 26 19.31976677615 29.949988685018873 30.656566430659904 20.07367810817122 27 20.17799231663194 29.885885485178278 29.823675628792884 20.112446569396898 28 19.476012690810705 30.195672538135092 29.380182464213554 20.948132306840648 29 20.400324933800597 29.328611394862186 29.21816635997508 21.052897311362134 30 19.947274892733077 29.45898161563505 29.952422983747002 20.641320507884874 31 20.984827106186817 28.69100544651801 29.70700960826724 20.61715783902794 32 19.857025521368186 29.863886637413007 30.001379435945935 20.27770840527287 33 19.64668407941584 29.781481117505404 30.634477423682483 19.937357379396275 34 20.066826008047613 29.83458489346337 30.70615399734391 19.39243510114511 35 19.981174756502508 29.96351256684179 30.13598713968998 19.91932553696573 36 19.40983582909059 29.643267045275252 30.836343899692466 20.11055322594169 37 19.694558621068943 29.1513583837699 29.46583371575866 21.6882492794025 38 19.79571725710432 30.06259754099765 29.582499736284305 20.559185465613727 39 20.813795080733065 28.55486503616737 30.067015342393134 20.564324540706433 40 21.45311405410815 28.288264245831712 30.414759423666254 19.843862276393885 41 20.952009152963218 27.757947759949293 30.948411800398322 20.341631286689164 42 20.013451754453186 29.26054118968687 30.668016650603303 20.057990405256643 43 19.168479618157704 29.21329776251883 30.947780685913255 20.670441933410206 44 18.906206470005383 29.068231590165073 30.729324914867163 21.29623702496238 45 19.137555008389313 29.1876023870553 30.44694626240478 21.227896342150604 46 19.234673821708196 28.163599447503852 30.696083840930154 21.905642889857802 47 20.218744280524977 28.259232979518533 30.455601546771444 21.066421193185043 48 18.69586502805304 28.727790405076327 30.656927067508516 21.919417499362122 49 19.734859788901222 28.287633131346645 30.46768288119991 21.509824198552224 50 18.795490957481817 29.729549411305424 29.889311535240083 21.58564809597268 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 54.0 1 46.0 2 38.0 3 128.5 4 219.0 5 245.0 6 271.0 7 282.5 8 294.0 9 443.0 10 592.0 11 863.0 12 1134.0 13 1844.5 14 2555.0 15 3496.0 16 4437.0 17 4926.0 18 5415.0 19 6030.0 20 6645.0 21 7833.5 22 9022.0 23 10838.5 24 12655.0 25 15461.0 26 18267.0 27 23305.5 28 28344.0 29 34616.5 30 40889.0 31 48305.0 32 55721.0 33 65583.5 34 75446.0 35 84877.0 36 94308.0 37 96985.5 38 99663.0 39 97040.0 40 94417.0 41 91603.0 42 88789.0 43 86100.0 44 83411.0 45 80786.5 46 78162.0 47 74530.0 48 70898.0 49 66359.0 50 61820.0 51 56040.5 52 50261.0 53 44552.0 54 38843.0 55 34022.0 56 29201.0 57 25013.0 58 20825.0 59 17376.5 60 13928.0 61 11536.0 62 9144.0 63 7290.5 64 5437.0 65 4386.5 66 3336.0 67 2632.0 68 1928.0 69 1523.5 70 1119.0 71 880.0 72 641.0 73 521.5 74 402.0 75 344.0 76 286.0 77 216.0 78 146.0 79 115.5 80 85.0 81 65.5 82 46.0 83 37.0 84 28.0 85 19.5 86 11.0 87 8.0 88 5.0 89 6.0 90 7.0 91 4.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01550738449027137 2 0.004507960607637027 3 5.409552729164432E-4 4 3.606368486109621E-4 5 0.0 6 5.409552729164432E-4 7 9.015921215274053E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.015921215274053E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1109149.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.50891993657024 #Duplication Level Percentage of deduplicated Percentage of total 1 90.15400566925523 76.18817647064189 2 7.963709696348925 13.460090102536787 3 1.1018428835320313 2.7934665608126434 4 0.2861944131974342 0.967439230047827 5 0.11801399047125588 0.4986617436065263 6 0.07850397915999478 0.3980571893720506 7 0.05718896520441361 0.3383084377200564 8 0.035960608539717734 0.24311937503626804 9 0.031028828235880563 0.23599914850004589 >10 0.15227808230029555 2.3538032771728474 >50 0.012903147858507637 0.7389022594921499 >100 0.007618609493037149 1.2245635202710359 >500 5.365188594701832E-4 0.35601462157317054 >1k 2.1460754378807331E-4 0.20339806321666368 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1237 0.11152694543294003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 9.015921215274053E-5 0.0 11 0.0 0.0 0.0 1.8031842430548105E-4 0.0 12 0.0 0.0 0.0 2.7047763645822155E-4 0.0 13 9.015921215274053E-5 0.0 0.0 2.7047763645822155E-4 0.0 14 9.015921215274053E-5 0.0 0.0 3.606368486109621E-4 0.0 15 9.015921215274053E-5 0.0 0.0 3.606368486109621E-4 0.0 16 9.015921215274053E-5 0.0 0.0 4.507960607637026E-4 0.0 17 9.015921215274053E-5 0.0 0.0 4.507960607637026E-4 0.0 18 9.015921215274053E-5 0.0 0.0 5.409552729164431E-4 0.0 19 9.015921215274053E-5 0.0 0.0 7.212736972219242E-4 0.0 20 9.015921215274053E-5 0.0 0.0 0.002253980303818513 0.0 21 9.015921215274053E-5 0.0 0.0 0.002704776364582216 0.0 22 9.015921215274053E-5 0.0 0.0 0.004147323759026064 0.0 23 9.015921215274053E-5 0.0 0.0 0.005499711941317172 0.0 24 9.015921215274053E-5 0.0 0.0 0.008294647518052128 0.0 25 9.015921215274053E-5 0.0 0.0 0.010187990973259679 0.0 26 9.015921215274053E-5 0.0 0.0 0.012622289701383673 0.0 27 9.015921215274053E-5 0.0 0.0 0.015777862126729592 0.0 28 9.015921215274053E-5 0.0 0.0 0.02587569388783653 0.0 29 9.015921215274053E-5 0.0 0.0 0.04246498892394079 0.0 30 9.015921215274053E-5 0.0 0.0 0.08312679360482676 0.0 31 9.015921215274053E-5 0.0 0.0 0.1849165441252708 0.0 32 9.015921215274053E-5 0.0 0.0 0.31672931229257745 0.0 33 9.015921215274053E-5 0.0 0.0 0.46053325567619857 0.0 34 9.015921215274053E-5 0.0 0.0 0.6416631128910543 0.0 35 9.015921215274053E-5 0.0 0.0 0.8390216282934033 0.0 36 9.015921215274053E-5 0.0 0.0 1.0921886960182987 0.0 37 9.015921215274053E-5 0.0 0.0 1.4762669397889734 0.0 38 9.015921215274053E-5 0.0 0.0 1.9734048355991847 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAACG 50 8.339135E-5 26.400784 4 TAGGACC 590 0.0 23.865114 4 GTATCAA 3275 0.0 22.041199 1 TAGGACG 1845 0.0 20.62934 4 AGGACGT 1830 0.0 20.317545 5 TAAGACG 65 4.930821E-4 20.308296 4 GTAGGAC 1595 0.0 20.138529 3 GGACGTG 1830 0.0 20.0771 6 TATTGCG 55 0.0044837818 19.999693 16 CTAGGAC 245 0.0 19.75569 3 GACGTGA 1025 0.0 19.316776 7 GACGTGG 955 0.0 19.120125 7 TGTAGGA 1810 0.0 19.08516 2 TTAGGAC 1210 0.0 18.909653 3 GTCCTAA 1195 0.0 18.784729 1 CTGTAGG 1855 0.0 18.745018 1 GCACTCG 95 1.5971273E-5 18.526031 13 TACTCGC 60 0.0074123847 18.33305 44 GTCCTAC 1565 0.0 17.718578 1 AGGCGGA 75 0.0012909127 17.59973 32 >>END_MODULE