FastQCFastQC Report
Thu 2 Feb 2017
SRR4062637_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062637_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4977
Sequences flagged as poor quality0
Sequence length25
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT140.2812939521800281No Hit
GCGCAAGACGGACCAGAGCGAAAGC80.16073940124573036No Hit
GCCCGAGGTTATCTAGAGTCACCAA70.14064697609001406No Hit
GAGTACTTTTTTTTTTTTTTTTTTT60.12055455093429776No Hit
ATCTGATCGTCTTCGAACCTCCGAC60.12055455093429776No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT60.12055455093429776No Hit
TATCTAGAGTCACCAAAGCCGCCGG60.12055455093429776No Hit
GAACTACGACGGTATCTGATCGTCT60.12055455093429776No Hit
CTCTTAATCATGGCCTCAGTTCCGA50.10046212577858146No Hit
GTACTTTTTTTTTTTTTTTTTTTTT50.10046212577858146No Hit
GGTATCAACGCAGAGTACTTTTTTT50.10046212577858146No Hit
GTCCTATTCCATTATTCCTAGCTGC50.10046212577858146No Hit
CTTCGGGCCCCGCGGGACACTCAGC50.10046212577858146No Hit
GAATAATTGCAATCCCCGATCCCCA50.10046212577858146No Hit
TATCAACGCAGAGTACTTTTTTTTT50.10046212577858146No Hit
GCTTTGAACACTCTAATTTTTTCAA50.10046212577858146No Hit
GGATTGACAGATTGATAGCTCTTTC50.10046212577858146No Hit
CCATAAACGATGCCGACTGGCGATG50.10046212577858146No Hit
CTCGGGGGTCGCGTAACTAGTTAGC50.10046212577858146No Hit
ACGCAGAGTACTTTTTTTTTTTTTT50.10046212577858146No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)