##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062636_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2237931 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206410742779827 32.0 32.0 32.0 32.0 32.0 2 30.90841183217892 32.0 32.0 32.0 32.0 32.0 3 30.898601878252727 32.0 32.0 32.0 32.0 32.0 4 30.954059798983973 32.0 32.0 32.0 32.0 32.0 5 30.782512955046425 32.0 32.0 32.0 32.0 32.0 6 34.43505630870657 36.0 36.0 36.0 32.0 36.0 7 34.32110060587212 36.0 36.0 36.0 32.0 36.0 8 34.32648191566228 36.0 36.0 36.0 32.0 36.0 9 34.45992972973698 36.0 36.0 36.0 32.0 36.0 10 34.173575056603624 36.0 36.0 36.0 32.0 36.0 11 34.446524937542755 36.0 36.0 36.0 32.0 36.0 12 34.24499012704145 36.0 36.0 36.0 32.0 36.0 13 34.36008929676563 36.0 36.0 36.0 32.0 36.0 14 34.277120697644385 36.0 36.0 36.0 32.0 36.0 15 34.225344302393594 36.0 36.0 36.0 32.0 36.0 16 34.22087320833395 36.0 36.0 36.0 32.0 36.0 17 34.14154860002386 36.0 36.0 36.0 32.0 36.0 18 34.16249294549296 36.0 36.0 36.0 32.0 36.0 19 34.14320816861646 36.0 36.0 36.0 32.0 36.0 20 34.13760209765181 36.0 36.0 36.0 32.0 36.0 21 34.10622177359355 36.0 36.0 36.0 32.0 36.0 22 34.068308629712 36.0 36.0 36.0 32.0 36.0 23 34.04564930732896 36.0 36.0 36.0 32.0 36.0 24 34.02183892175407 36.0 36.0 36.0 32.0 36.0 25 33.58469943890138 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 10.0 4 88.0 5 196.0 6 362.0 7 92.0 8 343.0 9 419.0 10 254.0 11 77.0 12 155.0 13 138.0 14 426.0 15 543.0 16 770.0 17 1068.0 18 1419.0 19 1936.0 20 2924.0 21 4120.0 22 6043.0 23 8899.0 24 12387.0 25 17561.0 26 24231.0 27 31799.0 28 42665.0 29 56859.0 30 73962.0 31 101934.0 32 147203.0 33 217806.0 34 504364.0 35 976877.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.51680374662886 17.16442221968991 11.364923170423797 25.953850863257433 2 17.259444655211936 19.94889744768758 36.3941241895692 26.397533707531277 3 19.403474622244982 23.302258531270976 28.000747153710787 29.293519692773256 4 13.07628297259226 15.110769676298347 35.03867508991713 36.77427226119227 5 15.245140656673453 35.811834962240496 32.78928653642859 16.15373784465746 6 34.56255993133462 34.52290746043135 16.730794591706957 14.183738016527078 7 30.76067331227034 30.028267811806664 20.3786688462959 18.8323900296271 8 28.39378187362225 31.92597068219335 19.59651678302882 20.08373066115558 9 27.367368334424658 14.67213759987405 18.803738769201043 39.15675529650025 10 16.539919786873767 25.951921334767896 30.487743228522408 27.020415649835925 11 37.297763764366515 21.325904714271207 22.09402774279644 19.282303778565833 12 25.206911455588198 23.561910574161953 27.851727103275415 23.379450866974434 13 29.22786888986217 19.13920442217332 25.40432276747308 26.228603920491427 14 23.938027362449557 19.754158501776143 24.531312914396157 31.776501221378144 15 25.451418898485993 26.86351769440403 22.163947685331816 25.521115721778152 16 26.192297472482345 25.57564972797715 23.430959161233815 24.801093638306686 17 24.26051095386884 25.555612224811114 25.0373122308956 25.146564590424447 18 25.226330083534304 24.417787839875437 26.08288106093485 24.27300101565541 19 25.62093035638143 24.83045808197162 25.280302891328965 24.268308670317985 20 25.847192042722988 23.8917841821695 24.920802581560704 25.340221193546814 21 26.98877376754616 23.897007337251843 24.295122264413994 24.819096630788 22 25.968042059249196 24.110586325194824 24.726635465921284 25.194736149634693 23 24.33561120368564 23.87709881172489 25.46571650000268 26.321573484586793 24 24.661502948831586 24.960211691252567 25.064061749844402 25.31422361007144 25 24.943355501943632 24.269751301123225 25.187875392842567 25.599017804090572 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 415.0 1 415.0 2 899.5 3 1384.0 4 1384.0 5 1384.0 6 3301.5 7 5219.0 8 5219.0 9 5219.0 10 5480.5 11 5742.0 12 5742.0 13 5742.0 14 5931.5 15 6121.0 16 6121.0 17 6121.0 18 9983.5 19 13846.0 20 13846.0 21 13846.0 22 22412.0 23 30978.0 24 30978.0 25 30978.0 26 46066.0 27 61154.0 28 61154.0 29 61154.0 30 75165.5 31 89177.0 32 89177.0 33 89177.0 34 111349.5 35 133522.0 36 133522.0 37 133522.0 38 151390.5 39 169259.0 40 169259.0 41 169259.0 42 195108.5 43 220958.0 44 220958.0 45 220958.0 46 256394.0 47 291830.0 48 291830.0 49 291830.0 50 297240.0 51 302650.0 52 302650.0 53 302650.0 54 280671.5 55 258693.0 56 258693.0 57 258693.0 58 239941.0 59 221189.0 60 221189.0 61 221189.0 62 197674.0 63 174159.0 64 174159.0 65 174159.0 66 145016.5 67 115874.0 68 115874.0 69 115874.0 70 88367.5 71 60861.0 72 60861.0 73 60861.0 74 48243.0 75 35625.0 76 35625.0 77 35625.0 78 29284.5 79 22944.0 80 22944.0 81 22944.0 82 16104.5 83 9265.0 84 9265.0 85 9265.0 86 6875.0 87 4485.0 88 4485.0 89 4485.0 90 2959.5 91 1434.0 92 1434.0 93 1434.0 94 844.0 95 254.0 96 254.0 97 254.0 98 573.5 99 893.0 100 893.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008311248202022314 2 0.0034853621492351643 3 0.004691833662431952 4 0.014075500987295854 5 0.03333436106832606 6 0.04450539359792594 7 0.06546225062345533 8 0.0872234219911159 9 0.09450693520041503 10 0.1177873669921012 11 0.1167149478692596 12 0.13034360755537147 13 0.11841294481375877 14 0.12292604195571713 15 0.11327426985014283 16 0.10978890770090767 17 0.12238983239429634 18 0.13052234407584504 19 0.13128197428785784 20 0.12037904653896836 21 0.12949460908312185 22 0.15054083436888804 23 0.1382973827164466 24 0.13306933949259384 25 0.13132665841797625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2237931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.19054826194316 #Duplication Level Percentage of deduplicated Percentage of total 1 77.77240131207044 34.3680505362826 2 12.583955934066251 11.121838240610412 3 3.789546076959955 5.023863564142687 4 1.599740449083982 2.827736300873133 5 0.8893160898811566 1.9649682795007912 6 0.5662720977739015 1.5014324679641633 7 0.3909904923436097 1.2094658955309838 8 0.310980475694767 1.0993918175769313 9 0.24808543930583388 0.9866728420856838 >10 1.5663693733960673 13.016699603735017 >50 0.13796686774811784 4.2437696677181105 >100 0.11700361310945089 10.859609678384878 >500 0.019261621954220945 5.841973151296652 >1k 0.008008779654649762 5.688805256107216 >5k 1.0137695765379444E-4 0.24572269819071604 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5485 0.24509245369942148 No Hit TATCAACGCAGAGTACTTTTTTTTT 3730 0.16667180534163029 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3073 0.1373143318538418 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2870 0.1282434534398067 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2804 0.1252943008519923 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2623 0.117206473300562 No Hit GAATAGGACCGCGGTTCTATTTTGT 2552 0.11403390006215562 No Hit GTATCTGATCGTCTTCGAACCTCCG 2508 0.11206779833694605 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2444 0.10920801400936847 No Hit GAACTACGACGGTATCTGATCGTCT 2397 0.1071078598938037 No Hit GTACATGGAAGCAGTGGTATCAACG 2362 0.1055439153396597 No Hit CTATTGGAGCTGGAATTACCGCGGC 2354 0.10518644229871252 No Hit GAATAACGCCGCCGCATCGCCAGTC 2314 0.10339907709397654 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2298 0.10268413101208215 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.936826023679909E-5 2 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 3 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 4 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 5 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 6 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 7 0.0 0.0 0.0 8.936826023679909E-5 8.936826023679909E-5 8 0.0 0.0 0.0 1.3405239035519861E-4 8.936826023679909E-5 9 0.0 0.0 0.0 2.234206505919977E-4 8.936826023679909E-5 10 0.0 0.0 0.0 2.234206505919977E-4 8.936826023679909E-5 11 0.0 0.0 0.0 2.234206505919977E-4 8.936826023679909E-5 12 0.0 0.0 0.0 2.234206505919977E-4 2.6810478071039723E-4 13 0.0 0.0 0.0 2.234206505919977E-4 3.1278891082879676E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACCG 45 6.769408E-4 14.776211 5 CAAGACG 465 0.0 12.461045 4 AATCGTA 85 3.9422775E-6 12.295015 13 TCGAATT 70 1.0903423E-4 12.21545 14 TAATACG 55 0.0030716066 12.089627 4 ACGGTAT 480 0.0 12.073528 9 AAGACGG 480 0.0 12.071638 5 TCGAACT 95 1.0372769E-6 12.003024 19 TCTACAC 335 0.0 11.623034 3 GTCTAGT 90 7.5144E-6 11.604169 1 CGACCAT 435 0.0 11.575298 10 CGGTCCA 575 0.0 11.565803 10 AGAATTT 590 0.0 11.273775 17 GACTATA 110 5.009879E-7 11.220561 1 TGGCGAG 195 0.0 11.208203 18 GCGCGCT 170 1.0913936E-11 11.177787 15 GATATAC 170 1.2732926E-11 11.169789 1 ACACGTT 60 0.0058660093 11.086127 19 CGCGTAT 95 1.3600595E-5 11.000557 7 GTGTAAT 130 3.2971002E-8 10.954986 1 >>END_MODULE