##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062636_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2237931 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289883378888803 32.0 32.0 32.0 32.0 32.0 2 31.45046116256489 32.0 32.0 32.0 32.0 32.0 3 31.515587388529852 32.0 32.0 32.0 32.0 32.0 4 31.616120425518034 32.0 32.0 32.0 32.0 32.0 5 31.553679268931884 32.0 32.0 32.0 32.0 32.0 6 35.15752049549338 36.0 36.0 36.0 36.0 36.0 7 35.169515503382364 36.0 36.0 36.0 36.0 36.0 8 35.115147875426004 36.0 36.0 36.0 36.0 36.0 9 35.23874864774651 36.0 36.0 36.0 36.0 36.0 10 35.11469388466401 36.0 36.0 36.0 36.0 36.0 11 35.23938897133111 36.0 36.0 36.0 36.0 36.0 12 35.14921371570437 36.0 36.0 36.0 36.0 36.0 13 35.18543601210225 36.0 36.0 36.0 36.0 36.0 14 35.14924410091285 36.0 36.0 36.0 36.0 36.0 15 35.11986562588391 36.0 36.0 36.0 36.0 36.0 16 35.12852272925305 36.0 36.0 36.0 36.0 36.0 17 35.101278815119855 36.0 36.0 36.0 36.0 36.0 18 35.10726112646011 36.0 36.0 36.0 36.0 36.0 19 35.09814958548767 36.0 36.0 36.0 36.0 36.0 20 35.08330953903405 36.0 36.0 36.0 36.0 36.0 21 35.08504819853695 36.0 36.0 36.0 36.0 36.0 22 35.07157682698886 36.0 36.0 36.0 36.0 36.0 23 35.030327119111355 36.0 36.0 36.0 36.0 36.0 24 35.00125338984982 36.0 36.0 36.0 36.0 36.0 25 34.977719152199064 36.0 36.0 36.0 36.0 36.0 26 34.93968312695968 36.0 36.0 36.0 32.0 36.0 27 34.92764611598838 36.0 36.0 36.0 32.0 36.0 28 34.91147671666374 36.0 36.0 36.0 32.0 36.0 29 34.88482084568291 36.0 36.0 36.0 32.0 36.0 30 34.87122838014219 36.0 36.0 36.0 32.0 36.0 31 34.86853750182647 36.0 36.0 36.0 32.0 36.0 32 34.842144820372035 36.0 36.0 36.0 32.0 36.0 33 34.81431465045169 36.0 36.0 36.0 32.0 36.0 34 34.80006220030913 36.0 36.0 36.0 32.0 36.0 35 34.76948887164082 36.0 36.0 36.0 32.0 36.0 36 34.74640236897384 36.0 36.0 36.0 32.0 36.0 37 34.74189195287969 36.0 36.0 36.0 32.0 36.0 38 34.703696852137085 36.0 36.0 36.0 32.0 36.0 39 34.694570565401705 36.0 36.0 36.0 32.0 36.0 40 34.68291694426682 36.0 36.0 36.0 32.0 36.0 41 34.641992090015286 36.0 36.0 36.0 32.0 36.0 42 34.626664986543375 36.0 36.0 36.0 32.0 36.0 43 34.61425620360949 36.0 36.0 36.0 32.0 36.0 44 34.57714245881576 36.0 36.0 36.0 32.0 36.0 45 34.528887619859596 36.0 36.0 36.0 32.0 36.0 46 34.52909629474725 36.0 36.0 36.0 32.0 36.0 47 34.49460863628057 36.0 36.0 36.0 32.0 36.0 48 34.44772068486473 36.0 36.0 36.0 32.0 36.0 49 34.441614151642746 36.0 36.0 36.0 32.0 36.0 50 33.930114467336125 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 16.0 21 40.0 22 205.0 23 562.0 24 1516.0 25 3488.0 26 7215.0 27 13343.0 28 22145.0 29 33474.0 30 49071.0 31 69323.0 32 101449.0 33 166712.0 34 370597.0 35 1398769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.840690302101024 17.828603401189383 11.894196937919558 26.43650935879004 2 16.627581497939094 20.24869428129167 36.118226081485425 27.005498139283812 3 18.73904951707281 23.54405775018265 28.378870511167758 29.338022221576782 4 12.760017301718376 15.54201028808791 35.19040827050736 36.50756413968635 5 15.025351541222673 35.945254791144144 32.79681098300171 16.232582684631474 6 34.77467043087293 34.745804366729494 16.452360716772077 14.027164485625503 7 30.75671233831606 30.157587521688562 20.350895536993768 18.734804603001614 8 28.44928125544588 31.916458513000855 19.589442029017885 20.044818202535378 9 27.474394876338902 14.38274906598997 18.731721398023442 39.411134659647686 10 16.528480994275515 25.975644468037668 30.60617150394717 26.889703033739647 11 37.62613771380798 21.13872143511127 22.01993716517623 19.215203685904527 12 25.16967681309209 23.53088634099979 27.84607747066375 23.453359375244368 13 29.327937277780237 19.03606500825986 25.43863059227474 26.19736712168516 14 24.01776462276987 19.54988782049134 24.629400995830526 31.802946560908268 15 25.515978821509687 26.80632244693871 22.161451805261198 25.5162469262904 16 26.35715757098856 25.50257358247417 23.39558279500128 24.744686051535993 17 24.37572918914837 25.473573582027324 25.03776926098258 25.112927967841724 18 25.369325506461106 24.265538124276397 26.150135996150013 24.215000373112485 19 25.76098190694887 24.672163708353832 25.340727663185326 24.226126721511967 20 25.966126748322445 23.683393277093888 25.021682974139953 25.328797000443714 21 27.069735393986676 23.821199134379032 24.419698373184875 24.689367098449416 22 26.053439538573798 23.877769243108926 24.935085129970496 25.13370608834678 23 24.362726107283915 23.64371376954875 25.557758483170396 26.435801639996942 24 24.804160628723583 24.75987865577625 25.222672191412514 25.213288524087652 25 25.1638678761767 23.910969551786895 25.309627508622924 25.615535063413486 26 24.62417295260667 24.91569221749911 25.699809332816788 24.760325497077435 27 25.58492643428238 24.305172947691418 24.95872303480313 25.151177583223078 28 24.68976925562048 24.28555661456944 25.73108822389966 25.293585905910415 29 24.577388668372706 24.524348605922167 25.646813954496363 25.25144877120876 30 24.710949533296603 24.73950269244226 25.740561259484767 24.80898651477637 31 25.238847846515377 24.469208389356062 24.650313168725933 25.64163059540263 32 24.937274652346296 24.477206848647253 24.698929502294753 25.886588996711694 33 24.59155353762024 24.04542409931316 25.338046615378225 26.024975747688377 34 25.334337832578395 24.35924074513468 25.43720070011095 24.869220722175974 35 25.952944929937516 24.125766165266043 25.318877123557428 24.602411781239013 36 24.61023150400973 24.783695297129356 25.010422573350116 25.595650625510796 37 25.821037377828006 24.515456464028603 24.859703002460755 24.803803155682637 38 24.790487284907353 24.11298650405218 25.4212931497888 25.675233061251667 39 25.283576660763895 24.06937479305662 24.89500346525429 25.752045080925196 40 25.44743336590806 24.433148296350513 25.39930855777055 24.720109779970876 41 24.272508848574866 24.684049686965327 26.011659876913097 25.031781587546714 42 25.962015808351552 24.646291597015278 25.273701468007726 24.11799112662544 43 24.80174768569719 23.544068159384718 25.620450317726508 26.033733837191587 44 24.38908974405377 24.267817014912435 25.397521192565815 25.94557204846798 45 24.441772333463362 24.57050731233447 25.498283905982806 25.48943644821936 46 24.30388796789891 24.091325465943974 25.599817688667653 26.004968877489464 47 24.415498064953745 24.071474947172184 26.131904871061707 25.38112211681236 48 25.210607476280543 24.816448764506145 24.929231508924985 25.043712250288326 49 24.16459667433893 24.821408702949288 25.440105168568643 25.573889454143135 50 24.022813929473248 25.17472611979547 25.211769263663626 25.590690687067653 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 51.0 2 58.0 3 229.0 4 400.0 5 456.5 6 513.0 7 479.5 8 446.0 9 606.0 10 766.0 11 1142.0 12 1518.0 13 2658.5 14 3799.0 15 4815.0 16 5831.0 17 6487.0 18 7143.0 19 7380.5 20 7618.0 21 8574.0 22 9530.0 23 10071.0 24 10612.0 25 11924.0 26 13236.0 27 16622.5 28 20009.0 29 22814.0 30 25619.0 31 28476.5 32 31334.0 33 36211.5 34 41089.0 35 47581.5 36 54074.0 37 65742.0 38 77410.0 39 85008.0 40 92606.0 41 101038.5 42 109471.0 43 113715.0 44 117959.0 45 131504.0 46 145049.0 47 155446.5 48 165844.0 49 170512.0 50 175180.0 51 167720.0 52 160260.0 53 158428.5 54 156597.0 55 159078.5 56 161560.0 57 157516.0 58 153472.0 59 141619.5 60 129767.0 61 114429.5 62 99092.0 63 87425.0 64 75758.0 65 64536.0 66 53314.0 67 47532.5 68 41751.0 69 38391.0 70 35031.0 71 26988.0 72 18945.0 73 16723.5 74 14502.0 75 10439.0 76 6376.0 77 5774.0 78 5172.0 79 4512.0 80 3852.0 81 2960.5 82 2069.0 83 1796.5 84 1524.0 85 1282.5 86 1041.0 87 773.0 88 505.0 89 315.0 90 125.0 91 78.5 92 32.0 93 21.0 94 10.0 95 9.0 96 8.0 97 7.0 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013494607295756661 2 0.003708782799827162 3 7.149460818943927E-4 4 1.3405239035519864E-4 5 0.0 6 4.021571710655958E-4 7 0.0 8 4.468413011839954E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 4.468413011839954E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2237931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.46315215516404 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7727834758634 38.1757739127656 2 12.483712528855374 12.10000119494491 3 3.4661238826048533 5.039378673339807 4 1.4976058462821307 2.903147999873364 5 0.7986809161062848 1.9353297380342342 6 0.49632494668056604 1.4432082845630367 7 0.3659087434886481 1.241316377741667 8 0.28282294675982184 1.096519320143448 9 0.23055853987436148 1.0056234238743271 >10 1.373185217094897 12.441886184605371 >50 0.11484683061503567 3.8623414711017703 >100 0.09815357080112 10.006056922973656 >500 0.013727394885176375 4.661764482702798 >1k 0.005565160088585015 4.087652013336112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2690 0.12020031001849477 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2666 0.11912789089565318 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2621 0.1171171050403252 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2544 0.11367642702120842 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2404 0.10742064880463251 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2261 0.10103081819770136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.468413011839954E-5 0.0 2 0.0 0.0 0.0 4.468413011839954E-5 0.0 3 0.0 0.0 0.0 4.468413011839954E-5 0.0 4 0.0 0.0 0.0 4.468413011839954E-5 0.0 5 0.0 0.0 0.0 4.468413011839954E-5 0.0 6 0.0 0.0 0.0 4.468413011839954E-5 0.0 7 0.0 0.0 0.0 4.468413011839954E-5 0.0 8 0.0 0.0 0.0 4.468413011839954E-5 4.468413011839954E-5 9 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 10 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 11 0.0 0.0 0.0 4.468413011839954E-5 8.936826023679909E-5 12 0.0 0.0 0.0 4.468413011839954E-5 1.7873652047359817E-4 13 0.0 0.0 0.0 4.468413011839954E-5 2.234206505919977E-4 14 0.0 0.0 0.0 8.936826023679909E-5 2.6810478071039723E-4 15 0.0 0.0 0.0 1.7873652047359817E-4 3.5747304094719634E-4 16 0.0 0.0 0.0 2.234206505919977E-4 4.0215717106559587E-4 17 0.0 0.0 0.0 2.6810478071039723E-4 4.468413011839954E-4 18 0.0 0.0 0.0 4.0215717106559587E-4 4.468413011839954E-4 19 0.0 0.0 0.0 5.362095614207945E-4 4.468413011839954E-4 20 0.0 0.0 0.0 8.043143421311917E-4 4.468413011839954E-4 21 4.468413011839954E-5 0.0 0.0 0.0010277349927231894 4.468413011839954E-4 22 4.468413011839954E-5 0.0 0.0 0.0017873652047359816 4.468413011839954E-4 23 4.468413011839954E-5 0.0 0.0 0.002993836717932769 5.80893691539194E-4 24 4.468413011839954E-5 0.0 0.0 0.005004622573260748 6.255778216575935E-4 25 4.468413011839954E-5 0.0 0.0 0.0063451464768127346 6.255778216575935E-4 26 4.468413011839954E-5 0.0 0.0 0.007998459291193518 6.255778216575935E-4 27 4.468413011839954E-5 0.0 0.0 0.011483821440428681 6.702619517759931E-4 28 4.468413011839954E-5 0.0 0.0 0.02033127920387179 6.702619517759931E-4 29 4.468413011839954E-5 0.0 0.0 0.03775808995004761 6.702619517759931E-4 30 4.468413011839954E-5 0.0 0.0 0.07086903036778167 6.702619517759931E-4 31 4.468413011839954E-5 0.0 0.0 0.1470107880895345 7.149460818943927E-4 32 4.468413011839954E-5 0.0 0.0 0.23718336266846476 7.596302120127922E-4 33 4.468413011839954E-5 0.0 0.0 0.3270431483365662 7.596302120127922E-4 34 4.468413011839954E-5 0.0 0.0 0.4346872177917907 7.596302120127922E-4 35 4.468413011839954E-5 0.0 0.0 0.5550215802006406 7.596302120127922E-4 36 4.468413011839954E-5 0.0 0.0 0.7292896876623989 7.596302120127922E-4 37 4.468413011839954E-5 0.0 0.0 0.9729075650679132 7.596302120127922E-4 38 4.468413011839954E-5 0.0 0.0 1.2986101895009274 7.596302120127922E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 50 2.3627526E-6 30.79981 5 GTATACG 55 1.592102E-4 24.00468 1 GTATCGA 50 0.0025812099 21.999865 9 ACGTCGT 70 8.1266084E-4 18.857029 23 TAGGACG 295 0.0 17.898197 4 CGCAATA 840 0.0 16.761803 36 GTATCAA 6040 0.0 16.758236 1 TAGTACG 185 4.2200554E-10 16.649292 2 CGTAATC 80 0.0019891434 16.4999 13 TATGCGC 95 3.3480625E-4 16.210428 10 GTCCTAA 220 1.8189894E-11 16.00312 1 TTAGGAC 335 0.0 15.76145 3 CTAGCGG 910 0.0 15.7141905 29 AACGTCG 85 0.0029811217 15.529318 22 ATACGAA 920 0.0 15.304255 40 CGGTCCA 970 0.0 15.195784 10 GGCGTTA 710 0.0 15.183006 42 CGTCGTA 755 0.0 15.152226 10 GCCGGTC 915 0.0 15.147449 8 TAGCGGC 945 0.0 15.132183 30 >>END_MODULE