##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062631_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 620314 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9181446815645 32.0 32.0 32.0 32.0 32.0 2 30.73892254567848 32.0 32.0 32.0 32.0 32.0 3 31.187783928784455 32.0 32.0 32.0 32.0 32.0 4 31.45378308405098 32.0 32.0 32.0 32.0 32.0 5 31.28705139655078 32.0 32.0 32.0 32.0 32.0 6 34.953231750371586 36.0 36.0 36.0 36.0 36.0 7 34.96561096476945 36.0 36.0 36.0 36.0 36.0 8 34.864990956193154 36.0 36.0 36.0 32.0 36.0 9 35.09577891197039 36.0 36.0 36.0 36.0 36.0 10 34.85444468446625 36.0 36.0 36.0 32.0 36.0 11 35.11431952204851 36.0 36.0 36.0 36.0 36.0 12 34.95845652363158 36.0 36.0 36.0 32.0 36.0 13 35.05445951566465 36.0 36.0 36.0 36.0 36.0 14 34.99623900153793 36.0 36.0 36.0 32.0 36.0 15 34.926866071054334 36.0 36.0 36.0 32.0 36.0 16 34.95764886815387 36.0 36.0 36.0 32.0 36.0 17 34.9280154889298 36.0 36.0 36.0 32.0 36.0 18 34.95576433870588 36.0 36.0 36.0 32.0 36.0 19 34.95531295440696 36.0 36.0 36.0 32.0 36.0 20 34.93355784328582 36.0 36.0 36.0 32.0 36.0 21 34.94683176584762 36.0 36.0 36.0 32.0 36.0 22 34.9284862182701 36.0 36.0 36.0 32.0 36.0 23 34.890479660301075 36.0 36.0 36.0 32.0 36.0 24 34.86854238337358 36.0 36.0 36.0 32.0 36.0 25 34.85172670615204 36.0 36.0 36.0 32.0 36.0 26 34.80270637128938 36.0 36.0 36.0 32.0 36.0 27 34.780846474527415 36.0 36.0 36.0 32.0 36.0 28 34.75443888095384 36.0 36.0 36.0 32.0 36.0 29 34.72281135038062 36.0 36.0 36.0 32.0 36.0 30 34.719720980019794 36.0 36.0 36.0 32.0 36.0 31 34.72604358437823 36.0 36.0 36.0 32.0 36.0 32 34.692412229935165 36.0 36.0 36.0 32.0 36.0 33 34.6600060614463 36.0 36.0 36.0 32.0 36.0 34 34.6611345221936 36.0 36.0 36.0 32.0 36.0 35 34.65095580625296 36.0 36.0 36.0 32.0 36.0 36 34.60516286912757 36.0 36.0 36.0 32.0 36.0 37 34.61100345953823 36.0 36.0 36.0 32.0 36.0 38 34.570983405178666 36.0 36.0 36.0 32.0 36.0 39 34.54905257659831 36.0 36.0 36.0 32.0 36.0 40 34.55985194594995 36.0 36.0 36.0 32.0 36.0 41 34.529588240794176 36.0 36.0 36.0 32.0 36.0 42 34.505879280493424 36.0 36.0 36.0 32.0 36.0 43 34.50528280838414 36.0 36.0 36.0 32.0 36.0 44 34.45912553964605 36.0 36.0 36.0 32.0 36.0 45 34.42773014956941 36.0 36.0 36.0 32.0 36.0 46 34.41729672391724 36.0 36.0 36.0 32.0 36.0 47 34.42106417072644 36.0 36.0 36.0 32.0 36.0 48 34.3689051028995 36.0 36.0 36.0 32.0 36.0 49 34.34191554599767 36.0 36.0 36.0 32.0 36.0 50 33.74988151162153 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 4.0 21 13.0 22 29.0 23 106.0 24 242.0 25 614.0 26 1282.0 27 2587.0 28 4671.0 29 8202.0 30 13647.0 31 22387.0 32 36816.0 33 68615.0 34 152523.0 35 308576.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.64309034187552 18.393080265374724 11.673102191840453 25.290727200909302 2 16.568836239764885 20.43057210244869 37.767596176633226 25.232995481153203 3 18.707873953549107 24.252189627461064 29.66108935679038 27.378847062199448 4 12.657782993774122 16.15359318022808 37.201320621491696 33.987303204506105 5 14.744145706851691 36.18248177535893 33.86913724339608 15.204235274393291 6 33.48207592643045 36.81895049418759 16.82027241174185 12.878701167640102 7 29.620482529815543 30.833739041840104 21.176049549099325 18.369728879245027 8 27.246201117498558 33.64392871997086 19.977140609433285 19.132729553097302 9 27.101274515809738 13.910696840632324 19.143852951892107 39.84417569166583 10 15.602904335546192 26.665688667352338 32.11357473795529 25.617832259146173 11 37.46054417601408 21.309852751993343 22.86293715763307 18.3666659143595 12 23.966088142456883 24.033312161260266 29.634991310852243 22.365608385430605 13 28.802026070667434 19.722753315256465 25.985226836731073 25.48999377734502 14 22.792650173944164 20.642126406948737 25.47338928349191 31.091834135615187 15 24.509038970585863 28.328556182836433 22.521658385914233 24.640746460663472 16 25.09261438561761 26.450636290652795 24.715869704697944 23.740879619031652 17 23.208084937628364 26.691643264540215 25.903494036890994 24.196777760940428 18 24.071357409312057 25.65474904645067 27.147863823805363 23.12602972043191 19 24.839033134831716 25.60815973845504 25.988773427651157 23.564033699062087 20 24.914478796222557 25.418900750265188 25.428412062278138 24.238208391234117 21 26.40453060869173 25.041027608598228 24.761814177980828 23.79262760472922 22 25.204654416956572 25.489510151310462 25.515948374532897 23.789887057200062 23 23.867912057441877 25.194337061552694 26.170294399288103 24.767456481717325 24 24.352827761424052 25.87205834464481 25.89430514223442 23.880808751696723 25 24.41247497235271 25.366185512498507 25.97845607224728 24.242883442901498 26 23.66640120970992 26.481588356864428 26.452087168756467 23.399923264669184 27 24.630751522615967 25.711494501171988 25.334588611574137 24.32316536463791 28 23.622552449243447 25.84932792102064 26.003765834722415 24.524353795013493 29 23.916919495610287 25.582043932588977 25.853680555331653 24.64735601646908 30 23.599015982228355 25.965075751957876 26.35052570149956 24.0853825643142 31 24.448746924944466 25.63298587489562 25.136140728727707 24.78212647143221 32 24.101987058167314 26.04068262202691 25.00314356922462 24.85418675058116 33 23.728788968167734 25.62669873644638 25.96330245649784 24.681209838888048 34 24.587870014218606 25.51417507907286 26.072440731629463 23.825514175079075 35 25.059244189233194 25.50498618441628 25.871897135966627 23.563872490383904 36 23.59192280038819 26.285397395512593 25.545610771319044 24.577069032780173 37 24.708131688145034 25.94621433661017 25.285581173405724 24.06007280183907 38 23.977856375964432 25.697146928813474 25.78452203239005 24.54047466283205 39 24.90641836231328 25.20159145207105 24.901259684611343 24.99073050100433 40 25.06375803222239 25.70343406726271 25.852229677227985 23.380578223286914 41 23.807297594444105 25.870768675219324 26.465467489045867 23.856466241290704 42 25.168866090399376 26.299744967871106 25.40132900434296 23.130059937386548 43 24.02766985752377 25.481610926079373 25.952179057703034 24.538540158693824 44 23.788274970418207 25.759212269914915 25.480804882688446 24.97170787697843 45 23.960607047398575 26.194153283659567 25.607353695064113 24.237885973877745 46 23.96157429946769 25.565439438735865 25.340230915310634 25.132755346485812 47 24.322198112568795 25.20110782603649 26.053740524959938 24.422953536434775 48 25.017652350261322 26.056158655132723 24.760040882520787 24.16614811208517 49 23.98333747102274 25.879473943841347 25.36683034721125 24.770358237924665 50 23.97608308050439 26.183674719577503 25.258820532826924 24.58142166709118 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 4.0 2 6.0 3 11.5 4 17.0 5 22.5 6 28.0 7 44.5 8 61.0 9 87.0 10 113.0 11 148.5 12 184.0 13 269.5 14 355.0 15 489.5 16 624.0 17 830.5 18 1037.0 19 1296.5 20 1556.0 21 2009.0 22 2462.0 23 2963.5 24 3465.0 25 4439.0 26 5413.0 27 7086.0 28 8759.0 29 10093.5 30 11428.0 31 12253.0 32 13078.0 33 15057.0 34 17036.0 35 19777.5 36 22519.0 37 25930.5 38 29342.0 39 30759.0 40 32176.0 41 33980.0 42 35784.0 43 35675.0 44 35566.0 45 37986.5 46 40407.0 47 42583.0 48 44759.0 49 45815.5 50 46872.0 51 44132.5 52 41393.0 53 40362.0 54 39331.0 55 39569.5 56 39808.0 57 38827.0 58 37846.0 59 34098.5 60 30351.0 61 26604.5 62 22858.0 63 19798.5 64 16739.0 65 14331.5 66 11924.0 67 10162.5 68 8401.0 69 7769.0 70 7137.0 71 5507.0 72 3877.0 73 3493.0 74 3109.0 75 2259.5 76 1410.0 77 1251.0 78 1092.0 79 940.5 80 789.0 81 622.5 82 456.0 83 380.5 84 305.0 85 264.5 86 224.0 87 174.5 88 125.0 89 89.0 90 53.0 91 38.0 92 23.0 93 16.5 94 10.0 95 6.0 96 2.0 97 1.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00951131201294828 2 0.0037077995982679737 3 4.8362603455669227E-4 4 0.0 5 0.0 6 4.8362603455669227E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 620314.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.107199374743 #Duplication Level Percentage of deduplicated Percentage of total 1 86.46496761527804 55.43026917843328 2 9.0059907997906 11.546976955385546 3 2.0740336357729325 3.9888146339525545 4 0.754969473608152 1.9359591426577034 5 0.3749550153883026 1.2018657964028874 6 0.2434135803459254 0.9362737755453759 7 0.16016115670297026 0.718723824339274 8 0.1084606592484655 0.5562487285405954 9 0.07974114338008811 0.460078323933355 >10 0.556718155881998 7.237663439999663 >50 0.08778986619014335 4.023184030275992 >100 0.08451031525048745 10.093939422178648 >500 0.004288583161961037 1.8700027483552115 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 996 0.16056384347282182 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 952 0.15347066163265702 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 873 0.14073517605599745 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 792 0.12767727312296676 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 754 0.12155134335191532 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 734 0.11832716978820404 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 679 0.109460692487998 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 676 0.10897706645344132 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 642 0.10349597139513214 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 638 0.10285113668238989 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6120867818556408E-4 2 0.0 0.0 0.0 0.0 1.6120867818556408E-4 3 0.0 0.0 0.0 0.0 1.6120867818556408E-4 4 0.0 0.0 0.0 0.0 1.6120867818556408E-4 5 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 6 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 7 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 8 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 9 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 10 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 11 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 12 0.0 0.0 0.0 1.6120867818556408E-4 1.6120867818556408E-4 13 0.0 0.0 0.0 1.6120867818556408E-4 3.2241735637112816E-4 14 0.0 0.0 0.0 1.6120867818556408E-4 3.2241735637112816E-4 15 0.0 0.0 0.0 1.6120867818556408E-4 4.8362603455669227E-4 16 0.0 0.0 0.0 1.6120867818556408E-4 4.8362603455669227E-4 17 0.0 0.0 0.0 1.6120867818556408E-4 4.8362603455669227E-4 18 0.0 0.0 0.0 1.6120867818556408E-4 4.8362603455669227E-4 19 0.0 0.0 0.0 1.6120867818556408E-4 4.8362603455669227E-4 20 0.0 0.0 0.0 1.6120867818556408E-4 6.448347127422563E-4 21 0.0 0.0 0.0 1.6120867818556408E-4 6.448347127422563E-4 22 0.0 0.0 0.0 1.6120867818556408E-4 8.060433909278204E-4 23 0.0 0.0 0.0 1.6120867818556408E-4 8.060433909278204E-4 24 0.0 0.0 0.0 3.2241735637112816E-4 8.060433909278204E-4 25 0.0 0.0 0.0 3.2241735637112816E-4 8.060433909278204E-4 26 0.0 0.0 0.0 3.2241735637112816E-4 0.0011284607472989486 27 0.0 0.0 0.0 8.060433909278204E-4 0.0011284607472989486 28 0.0 0.0 0.0 0.001773295460041205 0.0011284607472989486 29 0.0 0.0 0.0 0.0025793388509690253 0.0011284607472989486 30 0.0 0.0 0.0 0.004675051667381359 0.0011284607472989486 31 0.0 0.0 0.0 0.010156146725690537 0.0011284607472989486 32 0.0 0.0 0.0 0.019506250060453253 0.0011284607472989486 33 0.0 0.0 0.0 0.03256415299348395 0.0011284607472989486 34 0.0 0.0 0.0 0.04723414270837028 0.0011284607472989486 35 0.0 0.0 0.0 0.06448347127422563 0.0011284607472989486 36 0.0 0.0 0.0 0.09575795484222506 0.0011284607472989486 37 0.0 0.0 0.0 0.1476671492179767 0.0011284607472989486 38 0.0 0.0 0.0 0.22343522796519183 0.0011284607472989486 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTAC 25 0.0023491872 35.208317 1 CGCGGGA 60 2.8707014E-4 21.99988 44 TACCCCG 50 0.0025791177 21.999878 5 GGTCGTA 80 3.6110196E-6 21.999878 29 TTGTCGA 70 3.2122356E-5 21.999878 44 GTATCAA 910 0.0 21.521568 1 ATTGTCG 75 5.467364E-5 20.53322 43 GTCCTAA 215 0.0 20.469954 1 TTGTACT 140 1.8371793E-10 20.42846 4 GTATTGA 55 0.004475068 20.004728 1 GTTATAT 110 1.2599958E-7 20.004728 1 CGGTCCA 225 0.0 19.555447 10 TAGGACG 215 0.0 19.441753 4 CGCCGGT 230 0.0 19.13033 7 GTGTATA 255 0.0 18.98488 1 GCCGGTC 255 0.0 18.98029 8 GTAGAAC 360 0.0 18.94434 3 AACGCAG 1025 0.0 18.887703 6 CGTATAT 140 4.0708983E-9 18.857038 10 TAGACCA 140 4.0708983E-9 18.857038 4 >>END_MODULE