##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062630_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1703464 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35446654581488 32.0 32.0 32.0 32.0 32.0 2 31.519516702436917 32.0 32.0 32.0 32.0 32.0 3 31.585676597803065 32.0 32.0 32.0 32.0 32.0 4 31.664456660076173 32.0 32.0 32.0 32.0 32.0 5 31.6425354454218 32.0 32.0 32.0 32.0 32.0 6 35.25366488519863 36.0 36.0 36.0 36.0 36.0 7 35.269218486566196 36.0 36.0 36.0 36.0 36.0 8 35.21644073487904 36.0 36.0 36.0 36.0 36.0 9 35.334775492760635 36.0 36.0 36.0 36.0 36.0 10 35.25009451329761 36.0 36.0 36.0 36.0 36.0 11 35.331382406672525 36.0 36.0 36.0 36.0 36.0 12 35.28397488881479 36.0 36.0 36.0 36.0 36.0 13 35.298608599888226 36.0 36.0 36.0 36.0 36.0 14 35.27906782884757 36.0 36.0 36.0 36.0 36.0 15 35.24730196822475 36.0 36.0 36.0 36.0 36.0 16 35.27310351143317 36.0 36.0 36.0 36.0 36.0 17 35.27472667458778 36.0 36.0 36.0 36.0 36.0 18 35.275519177393825 36.0 36.0 36.0 36.0 36.0 19 35.247455185433914 36.0 36.0 36.0 36.0 36.0 20 35.23258020128397 36.0 36.0 36.0 36.0 36.0 21 35.21097363959555 36.0 36.0 36.0 36.0 36.0 22 35.19383268445943 36.0 36.0 36.0 36.0 36.0 23 35.17629195568559 36.0 36.0 36.0 36.0 36.0 24 35.15864614691006 36.0 36.0 36.0 36.0 36.0 25 35.12573379889449 36.0 36.0 36.0 36.0 36.0 26 35.10405444435574 36.0 36.0 36.0 36.0 36.0 27 35.07152484584353 36.0 36.0 36.0 36.0 36.0 28 35.03402713529608 36.0 36.0 36.0 36.0 36.0 29 35.00724817196019 36.0 36.0 36.0 36.0 36.0 30 34.96957082744338 36.0 36.0 36.0 36.0 36.0 31 34.963159186222896 36.0 36.0 36.0 36.0 36.0 32 34.93564407583606 36.0 36.0 36.0 36.0 36.0 33 34.957215415177544 36.0 36.0 36.0 36.0 36.0 34 34.93677706132915 36.0 36.0 36.0 36.0 36.0 35 34.91837279801628 36.0 36.0 36.0 36.0 36.0 36 34.869400233876384 36.0 36.0 36.0 36.0 36.0 37 34.81976725073145 36.0 36.0 36.0 36.0 36.0 38 34.78248909281323 36.0 36.0 36.0 36.0 36.0 39 34.668391583267976 36.0 36.0 36.0 32.0 36.0 40 34.72908027407682 36.0 36.0 36.0 36.0 36.0 41 34.696300596901374 36.0 36.0 36.0 32.0 36.0 42 34.70793982144618 36.0 36.0 36.0 36.0 36.0 43 34.68691853775601 36.0 36.0 36.0 32.0 36.0 44 34.62409126344907 36.0 36.0 36.0 32.0 36.0 45 34.611076606256425 36.0 36.0 36.0 32.0 36.0 46 34.50278784875994 36.0 36.0 36.0 32.0 36.0 47 34.51984779249811 36.0 36.0 36.0 32.0 36.0 48 34.46405735606975 36.0 36.0 36.0 32.0 36.0 49 34.41370172777353 36.0 36.0 36.0 32.0 36.0 50 33.985019935848364 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 8.0 21 28.0 22 92.0 23 312.0 24 801.0 25 1990.0 26 4339.0 27 8376.0 28 14557.0 29 23241.0 30 34203.0 31 49134.0 32 72153.0 33 118558.0 34 256378.0 35 1119290.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.80298407911826 21.156700556373636 12.695488183225182 25.344827181282923 2 11.622553782299466 22.178531696993357 46.18271158480564 20.016202935901536 3 18.357103651109067 27.579536882394894 30.42886369173239 23.634495774763643 4 10.321392552343404 18.13600773014015 41.117089785389986 30.42550993212646 5 10.341463242817719 41.209054731449996 36.78007681998376 11.669405205748525 6 28.825415536125842 40.273513585862204 19.35616996446061 11.544900913551343 7 25.85822284265807 32.78030270120495 23.5630146137689 17.79845984236807 8 22.356047651167064 42.66115554021426 20.935470861415833 14.047325947202847 9 26.533698393391347 15.040998811832832 21.5044168823057 36.92088591247012 10 13.892867709561225 31.236410044474084 35.90413416426763 18.966588081697058 11 33.33407691621308 22.2369829946509 27.711592378823386 16.717347710312634 12 23.849285925619796 25.180455824132476 34.588696914052775 16.381561336194952 13 29.604323895309793 23.89971258564901 26.845063940300466 19.65089957874073 14 18.581431717958232 25.457596990602678 28.66993373502463 27.29103755641446 15 20.039402065438424 37.89202472139124 23.385818543861213 18.682754669309126 16 18.272120807953677 29.723551539686195 33.31617222318757 18.688155429172557 17 18.26466541118568 32.08714713078762 30.70367204707584 18.944515410950864 18 18.35571517801374 29.01622810931138 35.789133201523484 16.838923511151396 19 22.942369195944266 26.926721081279087 28.647039209516606 21.48387051326004 20 23.1372074784087 29.65081739326455 30.219247368890684 16.992727759436065 21 21.168806619922698 28.069862351068174 27.602168287677344 23.15916274133178 22 21.829460440608077 32.35630456528579 28.472982111744074 17.341252882362056 23 19.222478432182893 31.806307617889196 30.13019353505563 18.841020414872283 24 22.28647039209517 28.377999182841553 31.468525310778507 17.867005114284776 25 20.25924821422701 30.41273546138926 30.95621627460281 18.371800049780916 26 17.071978040040765 32.05826480630057 32.255099021758014 18.614658131900644 27 18.573330578163084 31.166434981895712 30.950404587358467 19.309829852582737 28 17.740439480963495 32.19269676377076 28.86242386102671 21.204439894239034 29 19.937550778883498 29.133753340252568 28.47668045817229 22.452015422691645 30 18.197332024627467 30.109118830805937 30.55286169828068 21.140687446285924 31 21.853529044347283 28.302505952576634 29.759302221825646 20.08466278125044 32 19.192598141199344 31.261300502975114 30.15690381481499 19.389197541010553 33 18.223572673094353 31.386222426772743 32.154010886053356 18.236194014079548 34 19.334426791525974 31.247916011139655 31.852037964993684 17.56561923234069 35 18.370215044168823 31.852625004109274 31.3827001920792 18.394459759642704 36 17.44991382265783 30.92328338021819 32.66649603396374 18.960306763160244 37 18.28163084162624 30.198113960729433 29.238715934120123 22.28153926352421 38 19.303842053603717 32.41999830932735 28.926235012891375 19.349924624177557 39 21.458040792174064 28.296752969243848 30.212907346442307 20.03229889213978 40 22.895053843227682 28.310254868902422 30.818320786350633 17.976370501519256 41 21.782673423095527 27.008378222257708 32.56235529485801 18.64659305978876 42 19.84926009589871 31.38504834854156 31.194201932063137 17.571489623496593 43 17.759987883512654 31.418039946837737 32.141037321598816 18.680934848050796 44 17.236114176759827 31.297051185114565 30.991145101980432 20.475689536145172 45 17.711087525183977 31.5457796583902 30.43392757346208 20.30920524296375 46 18.51853373807795 28.215028110417556 31.130504308581173 22.13593384292332 47 21.381503443279954 28.482567569709467 30.364909598858326 19.771019388152254 48 17.936040914278202 29.480693457566463 30.259400844397067 22.32386478375827 49 20.470476904987077 28.674529473196657 30.13936903824738 20.715624583568886 50 18.199525437021784 32.074563447849144 28.95867357182021 20.767237543308863 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 21.5 2 27.0 3 69.5 4 112.0 5 156.5 6 201.0 7 206.0 8 211.0 9 319.5 10 428.0 11 701.5 12 975.0 13 1592.5 14 2210.0 15 3155.5 16 4101.0 17 4779.0 18 5457.0 19 6469.0 20 7481.0 21 9223.0 22 10965.0 23 14003.0 24 17041.0 25 22030.0 26 27019.0 27 38246.0 28 49473.0 29 61951.0 30 74429.0 31 90021.5 32 105614.0 33 129071.5 34 152529.0 35 176408.0 36 200287.0 37 199064.5 38 197842.0 39 181497.0 40 165152.0 41 149121.5 42 133091.0 43 120089.5 44 107088.0 45 98973.0 46 90858.0 47 84954.5 48 79051.0 49 72997.0 50 66943.0 51 59413.5 52 51884.0 53 45976.5 54 40069.0 55 35815.0 56 31561.0 57 27573.5 58 23586.0 59 20496.5 60 17407.0 61 14814.5 62 12222.0 63 10333.0 64 8444.0 65 7216.5 66 5989.0 67 5221.5 68 4454.0 69 3968.5 70 3483.0 71 2731.0 72 1979.0 73 1731.5 74 1484.0 75 1080.5 76 677.0 77 649.0 78 621.0 79 502.0 80 383.0 81 315.5 82 248.0 83 210.0 84 172.0 85 145.5 86 119.0 87 86.0 88 53.0 89 37.0 90 21.0 91 12.5 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017141542175238222 2 0.004050569897573415 3 5.283352040313151E-4 4 1.1740782311807001E-4 5 5.8703911559035005E-5 6 1.1740782311807001E-4 7 1.1740782311807001E-4 8 5.8703911559035005E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.76111734677105E-4 47 5.8703911559035005E-5 48 0.0 49 5.8703911559035005E-5 50 1.1740782311807001E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1703464.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.8760728660985 #Duplication Level Percentage of deduplicated Percentage of total 1 84.24862176898803 58.869628335981794 2 11.207540559897138 15.662778416262535 3 2.402483607854564 5.036283589261583 4 0.7687586162347628 2.1487133233784537 5 0.3723596842198204 1.3009516213470798 6 0.20378059170464488 0.8543632484790261 7 0.12835926687333293 0.6278469039555996 8 0.09481802487260323 0.5300408972014049 9 0.07085205695589304 0.4455777145106649 >10 0.431766069937528 5.750641412269411 >50 0.040798503091297005 1.9782926947831336 >100 0.02588586499372208 3.433396922016204 >500 0.002452896743094366 1.2135034441986214 >1k 0.0014379049873311802 1.8425370091998843 >5k 8.458264631359883E-5 0.3054444671546111 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 5168 0.3033818149370929 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 3992 0.23434601494366775 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 3555 0.20869240559236946 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 3417 0.2005912657972226 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2205 0.12944212498767219 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1814 0.10648889556808948 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 5.8703911559035E-5 0.0 0.0 0.0 6 0.0 5.8703911559035E-5 0.0 0.0 0.0 7 0.0 5.8703911559035E-5 0.0 0.0 0.0 8 0.0 5.8703911559035E-5 0.0 0.0 0.0 9 0.0 5.8703911559035E-5 0.0 0.0 0.0 10 0.0 5.8703911559035E-5 0.0 1.76111734677105E-4 0.0 11 0.0 5.8703911559035E-5 0.0 1.76111734677105E-4 0.0 12 0.0 5.8703911559035E-5 0.0 1.76111734677105E-4 0.0 13 0.0 5.8703911559035E-5 0.0 2.3481564623614E-4 0.0 14 0.0 5.8703911559035E-5 0.0 2.3481564623614E-4 0.0 15 0.0 5.8703911559035E-5 0.0 2.3481564623614E-4 0.0 16 0.0 5.8703911559035E-5 0.0 2.3481564623614E-4 0.0 17 0.0 5.8703911559035E-5 0.0 3.5222346935421E-4 0.0 18 0.0 5.8703911559035E-5 0.0 4.6963129247228E-4 0.0 19 0.0 5.8703911559035E-5 0.0 5.8703911559035E-4 0.0 20 0.0 5.8703911559035E-5 0.0 0.001115374319621665 0.0 21 0.0 5.8703911559035E-5 0.0 0.0011740782311807 0.0 22 0.0 5.8703911559035E-5 0.0 0.001585005612093945 0.0 23 0.0 1.1740782311807E-4 0.0 0.001937229081448155 0.0 24 0.0 1.1740782311807E-4 0.0 0.00317001122418789 0.0 25 0.0 1.1740782311807E-4 0.0 0.003580938605101135 0.0 26 0.0 1.1740782311807E-4 0.0 0.005107240305636045 0.0 27 0.0 1.1740782311807E-4 0.0 0.0058703911559035 0.0 28 0.0 1.1740782311807E-4 0.0 0.0105667040806263 0.0 29 0.0 1.1740782311807E-4 0.0 0.017552469556151466 0.0 30 0.0 1.1740782311807E-4 0.0 0.0353984586700981 0.0 31 0.0 2.3481564623614E-4 0.0 0.08576641478775014 0.0 32 0.0 2.3481564623614E-4 0.0 0.15744389080133186 0.0 33 0.0 2.3481564623614E-4 0.0 0.2369876909638243 0.0 34 0.0 2.3481564623614E-4 0.0 0.3319706198663429 0.0 35 0.0 2.3481564623614E-4 0.0 0.43059319128552176 0.0 36 0.0 2.3481564623614E-4 0.0 0.5706020203538202 0.0 37 0.0 2.3481564623614E-4 0.0 0.783227588020645 0.0 38 0.0 2.3481564623614E-4 0.0 1.059781715375259 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGGT 30 0.005745947 29.333038 4 TAGGACC 2165 0.0 27.232983 4 GTATCAA 3420 0.0 26.19025 1 AACCGCG 65 1.8140965E-5 23.692072 7 TGTAGGA 6240 0.0 23.13001 2 CTGTAGG 6105 0.0 22.890717 1 GTAGGAC 6215 0.0 22.513048 3 AGGACCT 3935 0.0 22.363184 5 CGCGGTC 70 3.2165986E-5 21.99978 10 ACGGTAT 100 4.627327E-8 21.99978 9 CGAGCCG 90 4.0842315E-7 21.999779 15 GGTATCA 1325 0.0 21.924484 1 GGACCTG 3860 0.0 21.88579 6 ACTGTTC 1730 0.0 21.109615 8 CTACGAC 115 8.778443E-9 21.043268 4 ACGACGG 115 8.778443E-9 21.043268 6 GTCCTAC 5445 0.0 20.976875 1 ACGGACC 95 6.8703594E-7 20.841896 8 CGGACCA 95 6.8703594E-7 20.841896 9 GGACGTC 85 6.116381E-6 20.705675 6 >>END_MODULE