##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062627_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 729361 Sequences flagged as poor quality 0 Sequence length 25 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.064220598578757 32.0 32.0 32.0 32.0 32.0 2 30.825236062800176 32.0 32.0 32.0 32.0 32.0 3 30.83471696457584 32.0 32.0 32.0 32.0 32.0 4 30.76000636173308 32.0 32.0 32.0 32.0 32.0 5 30.803278486236582 32.0 32.0 32.0 32.0 32.0 6 34.241072664976606 36.0 36.0 36.0 32.0 36.0 7 34.14541358805859 36.0 36.0 36.0 32.0 36.0 8 34.04437720141329 36.0 36.0 36.0 32.0 36.0 9 34.22404543154899 36.0 36.0 36.0 32.0 36.0 10 33.96242327187771 36.0 36.0 36.0 32.0 36.0 11 34.2705409255499 36.0 36.0 36.0 32.0 36.0 12 34.092552247789506 36.0 36.0 36.0 32.0 36.0 13 34.197123235270325 36.0 36.0 36.0 32.0 36.0 14 34.0668379581579 36.0 36.0 36.0 32.0 36.0 15 34.057727243436375 36.0 36.0 36.0 32.0 36.0 16 34.11656916122469 36.0 36.0 36.0 32.0 36.0 17 34.023480827738254 36.0 36.0 36.0 32.0 36.0 18 34.12479279807941 36.0 36.0 36.0 32.0 36.0 19 34.05882409396718 36.0 36.0 36.0 32.0 36.0 20 33.95441900512915 36.0 36.0 36.0 32.0 36.0 21 33.92570757142211 36.0 36.0 36.0 32.0 36.0 22 33.90138079771197 36.0 36.0 36.0 32.0 36.0 23 33.877237746465745 36.0 36.0 36.0 32.0 36.0 24 33.83325404018038 36.0 36.0 36.0 32.0 36.0 25 33.250885364037835 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 30.0 5 68.0 6 111.0 7 32.0 8 112.0 9 145.0 10 92.0 11 26.0 12 59.0 13 45.0 14 249.0 15 468.0 16 638.0 17 943.0 18 1136.0 19 1466.0 20 1724.0 21 2018.0 22 2364.0 23 3088.0 24 3829.0 25 5032.0 26 6938.0 27 9197.0 28 12665.0 29 17749.0 30 24461.0 31 35906.0 32 55904.0 33 86197.0 34 194297.0 35 262367.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.73397961072528 21.35361748513996 11.774360521318242 25.138042382816515 2 14.394443172360653 21.356108355945196 41.40623607468152 22.84321239701263 3 18.142254824666644 26.491344736571488 31.047338292256537 24.31906214650533 4 10.481070911404625 17.508721312914126 41.767135460090394 30.243072315590858 5 10.946080878681977 39.9828828186292 36.73665326186544 12.334383040823381 6 27.85761119752873 41.6177652677986 18.722994493963114 11.801629040709557 7 25.658186288431644 34.33668240359247 22.81758200145707 17.187549306518818 8 24.785821617504787 36.964519736796966 21.045950748921047 17.203707896777203 9 26.673803102977406 15.157379006525723 21.891430100664923 36.27738778983195 10 14.886166306324858 27.954837159820173 35.086584989189745 22.072411544665226 11 32.528294634829344 23.54182252451973 26.683367765049866 17.246515075601067 12 22.283042207422234 27.527564633247252 31.843998797329416 18.3453943620011 13 26.75119803098751 22.73039875797372 28.486850142830278 22.031553068208492 14 20.274599919283766 24.36888965761492 27.644074357770588 27.71243606533073 15 23.119537809647085 31.040271450356947 25.367211553111673 20.47297918688429 16 22.076481730584458 29.155845938452245 27.767452713646474 21.000219617316827 17 19.633510368864442 29.165700040769877 29.338114070549736 21.862675519815944 18 19.85563036100647 27.92473448946195 32.42097835279129 19.79865679674029 19 23.264648261868185 27.569031723085075 28.409644740436878 20.75667527460986 20 21.436553129101164 28.506476747953197 30.213109443038118 19.84386067990753 21 23.04955045860224 26.187897184136933 27.66289268803653 23.099659669224295 22 21.26606368765559 29.712621503200037 27.9570985056428 21.06421630350157 23 20.988701844857342 29.409527575379386 29.531721743285154 20.070048836478115 24 21.70966736637475 29.3641259804036 28.388012613965696 20.53819403925596 25 20.971929154991646 28.917212492466437 29.589226901992976 20.521631450548938 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 141.0 2 464.5 3 788.0 4 788.0 5 788.0 6 2493.0 7 4198.0 8 4198.0 9 4198.0 10 4435.0 11 4672.0 12 4672.0 13 4672.0 14 4853.0 15 5034.0 16 5034.0 17 5034.0 18 8281.0 19 11528.0 20 11528.0 21 11528.0 22 18145.0 23 24762.0 24 24762.0 25 24762.0 26 36083.0 27 47404.0 28 47404.0 29 47404.0 30 57040.0 31 66676.0 32 66676.0 33 66676.0 34 72524.0 35 78372.0 36 78372.0 37 78372.0 38 78508.5 39 78645.0 40 78645.0 41 78645.0 42 82726.5 43 86808.0 44 86808.0 45 86808.0 46 94149.5 47 101491.0 48 101491.0 49 101491.0 50 92621.0 51 83751.0 52 83751.0 53 83751.0 54 69229.5 55 54708.0 56 54708.0 57 54708.0 58 44654.5 59 34601.0 60 34601.0 61 34601.0 62 28039.0 63 21477.0 64 21477.0 65 21477.0 66 17140.5 67 12804.0 68 12804.0 69 12804.0 70 9452.0 71 6100.0 72 6100.0 73 6100.0 74 4502.0 75 2904.0 76 2904.0 77 2904.0 78 2149.5 79 1395.0 80 1395.0 81 1395.0 82 967.0 83 539.0 84 539.0 85 539.0 86 369.5 87 200.0 88 200.0 89 200.0 90 133.5 91 67.0 92 67.0 93 67.0 94 44.0 95 21.0 96 21.0 97 21.0 98 148.0 99 275.0 100 275.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0076779537156497265 2 0.0032905515924213113 3 0.004935827388631967 4 0.01549301374765034 5 0.03688159909838886 6 0.04702746650835457 7 0.06882737080814576 8 0.08857068036267363 9 0.0967970593437269 10 0.12147619628688675 11 0.11873406995986897 12 0.13463840265657198 13 0.11983092049067609 14 0.12106487733783407 15 0.11379824257123701 16 0.112564285724079 17 0.1209277710214832 18 0.13066231948239623 19 0.132170488962256 20 0.12462964156295717 21 0.13052521316604535 22 0.14917167218976612 23 0.13875159214709862 24 0.13189627632955422 25 0.13079942579874712 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 729361.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.57500700348083 #Duplication Level Percentage of deduplicated Percentage of total 1 73.7800842799069 24.7716684641528 2 14.215289642525475 9.545568986086025 3 4.763369559081628 4.797904989189991 4 2.057067074168526 2.7626416568735235 5 1.0423138660411053 1.7497847676077642 6 0.6630814997468917 1.3357779598728277 7 0.4427906137591255 1.040668857062675 8 0.33442979445436505 0.8982786152782369 9 0.25239572125972337 0.7626769298049427 >10 1.7895075950959696 12.246770700487653 >50 0.2976910908812215 7.083787733477783 >100 0.3230787766622222 21.69488186075751 >500 0.029891952720332345 6.715609497103453 >1k 0.009008533696538515 4.593978982244803 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2882 0.39514040372325915 No Hit GTACATGGAAGCAGTGGTATCAACG 2363 0.3239822255371483 No Hit TCCATGTACTCTGCGTTGATACCAC 2238 0.30684393599328724 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2052 0.2813421611520221 No Hit TATCAACGCAGAGTACTTTTTTTTT 1959 0.2685912737313895 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1831 0.2510416652384759 No Hit GTATTAGAGGCACTGCCTGCCCAGT 1619 0.22197512617208762 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1504 0.20620789979173554 No Hit CCATAGGGTCTTCTCGTCTTATTAT 1467 0.20113496608675263 No Hit CTCTAATACTTGTAATGCTAGAGGT 1423 0.19510228816731356 No Hit GTCCTACAGTGGACATTTCTAAATT 1366 0.18728722813531296 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1333 0.18276271969573366 No Hit CCATTGGGATGTCCTGATCCAACAT 1282 0.17577029756183837 No Hit GTCCTACAGTGTGCATTTCTCATTT 1272 0.1743992343983295 No Hit CTTTAGGACGTGAAATATGGCGAGG 1235 0.16932630069334664 No Hit CTGTAGGACGTGGAATATGGCAAGA 1204 0.16507600488646912 No Hit GTGTAAAGGTATAAGGGAGCTTGAC 1129 0.15479303116015253 No Hit GATATATTTTGATCAACGGACCAAG 1076 0.14752639639355544 No Hit CTTCTACACCATTGGGATGTCCTGA 1061 0.14546980164829212 No Hit GAGTACATGGAAGCAGTGGTATCAA 1059 0.14519558901559038 No Hit CCTTTACACTCTGCGAATGATTTCC 1052 0.14423584480113416 No Hit CCCTTATACCTTTACACTCTGCGAA 1008 0.13820316688169507 No Hit CATGTACTCTGCGTTGATACCACTG 977 0.13395287107481754 No Hit GTCAGGATACCGCGGCCGTTAAACT 976 0.13381576475846665 No Hit GGTATCAACGCAGAGTACTTTTTTT 964 0.132170488962256 No Hit ATCTATAACTTTATAGATGCAACAC 957 0.13121074474779978 No Hit GTATCCTGACCGTGCAAAGGTAGCA 955 0.130936532115098 No Hit ATCGTAAATAGATAGAAACCGACCT 899 0.12325857839944829 No Hit CTGTTAGTATGAGTAACAAGAATTC 897 0.12298436576674651 No Hit ATCCTGACCGTGCAAAGGTAGCATA 887 0.12161330260323762 No Hit GCCTAAAGGAAAGATCCAAAAAGAT 879 0.12051645207243052 No Hit GTTATAGATTAACCCAATTTTAAGT 878 0.12037934575607964 No Hit GTTATATAATTTAAGCTCCATAGGG 872 0.1195567078579743 No Hit CCTCTAGCATTACAAGTATTAGAGG 870 0.11928249522527254 No Hit CTGTAGGACCTGGAATATGGCGAGA 800 0.10968505308071037 No Hit TCCCAATGGTGTAGAAGCTATTAAT 775 0.10625739517193818 No Hit GATTAAACCTTGTACCTTTTGCATA 774 0.10612028885558727 No Hit GTACATGGGAGAAATCGTAAATAGA 769 0.10543475727383285 No Hit AAATATATCTGGGTCAATAAGATAT 759 0.10406369411032398 No Hit GTATAAGGGAGCTTGACTGCGAGAG 758 0.10392658779397308 No Hit CACTATAAATAATCCACCTATAACT 747 0.10241841831411332 No Hit GTCCTAAGGTAGCGAAATTCCTTGT 745 0.10214420568141153 No Hit CTATAGAACTAGTACCGCAAGGGAA 743 0.10186999304870976 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.113189490526639E-4 0.0 10 0.0 0.0 0.0 4.113189490526639E-4 0.0 11 0.0 0.0 0.0 5.484252654035518E-4 0.0 12 0.0 0.0 0.0 5.484252654035518E-4 0.0 13 0.0 0.0 0.0 5.484252654035518E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACCCC 25 0.0060293213 18.99986 4 AGGCGTC 35 0.0021678207 16.286716 15 ATGTACG 120 0.0 15.834307 17 ACCGGGC 55 1.1245458E-5 15.548544 8 TTATACC 155 0.0 15.32247 4 GGATAAG 50 8.76572E-5 15.187377 1 CACCGGG 45 6.74605E-4 14.780715 7 GTCCTAT 65 3.395333E-6 14.603247 1 GTAAAGG 230 0.0 14.452448 3 TGTAAAG 230 0.0 14.448481 2 TAGGACC 470 0.0 14.350961 4 CGGCACG 40 0.005268586 14.252832 9 CAGGCGT 40 0.0052733887 14.250875 14 CCACCTT 180 0.0 14.250875 13 GTACGAA 135 0.0 14.074939 19 AGGTATA 230 0.0 14.04627 7 TAGGCCC 75 9.653195E-7 13.933233 4 ATAGGAC 75 9.683135E-7 13.929407 3 TGCGAAT 160 0.0 13.658965 12 AGCCCGA 70 7.2350012E-6 13.574126 6 >>END_MODULE