##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062623_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 653471 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.05396873005841 32.0 32.0 32.0 21.0 32.0 2 29.461823095439584 32.0 32.0 32.0 14.0 32.0 3 30.675267915485154 32.0 32.0 32.0 32.0 32.0 4 31.154735252214714 32.0 32.0 32.0 32.0 32.0 5 30.834491507656804 32.0 32.0 32.0 32.0 32.0 6 34.480175860902776 36.0 36.0 36.0 32.0 36.0 7 34.507981226404844 36.0 36.0 36.0 32.0 36.0 8 34.37717511565165 36.0 36.0 36.0 32.0 36.0 9 34.737870540544264 36.0 36.0 36.0 32.0 36.0 10 34.30044026437287 36.0 36.0 36.0 32.0 36.0 11 34.77088348220502 36.0 36.0 36.0 32.0 36.0 12 34.517404750937686 36.0 36.0 36.0 32.0 36.0 13 34.67993070847827 36.0 36.0 36.0 32.0 36.0 14 34.585719947786515 36.0 36.0 36.0 32.0 36.0 15 34.49081290523986 36.0 36.0 36.0 32.0 36.0 16 34.53676750766292 36.0 36.0 36.0 32.0 36.0 17 34.484423945362536 36.0 36.0 36.0 32.0 36.0 18 34.52139574671256 36.0 36.0 36.0 32.0 36.0 19 34.5139753715161 36.0 36.0 36.0 32.0 36.0 20 34.51843463596701 36.0 36.0 36.0 32.0 36.0 21 34.5249674430847 36.0 36.0 36.0 32.0 36.0 22 34.49074251190948 36.0 36.0 36.0 32.0 36.0 23 34.42439373744206 36.0 36.0 36.0 32.0 36.0 24 34.397348925966114 36.0 36.0 36.0 32.0 36.0 25 34.36510878064979 36.0 36.0 36.0 32.0 36.0 26 34.29188900502088 36.0 36.0 36.0 32.0 36.0 27 34.279028449617506 36.0 36.0 36.0 32.0 36.0 28 34.26069098705222 36.0 36.0 36.0 32.0 36.0 29 34.210648980597455 36.0 36.0 36.0 32.0 36.0 30 34.20298834990382 36.0 36.0 36.0 32.0 36.0 31 34.191384162418835 36.0 36.0 36.0 32.0 36.0 32 34.15367170080998 36.0 36.0 36.0 32.0 36.0 33 34.114791628090614 36.0 36.0 36.0 32.0 36.0 34 34.088799655990854 36.0 36.0 36.0 32.0 36.0 35 34.07916342117707 36.0 36.0 36.0 32.0 36.0 36 34.00805238488012 36.0 36.0 36.0 32.0 36.0 37 34.037775203490284 36.0 36.0 36.0 32.0 36.0 38 33.957794607564836 36.0 36.0 36.0 32.0 36.0 39 33.94343742874588 36.0 36.0 36.0 32.0 36.0 40 33.949892191084224 36.0 36.0 36.0 32.0 36.0 41 33.89058121936551 36.0 36.0 36.0 32.0 36.0 42 33.84440319463297 36.0 36.0 36.0 32.0 36.0 43 33.8390548318135 36.0 36.0 36.0 32.0 36.0 44 33.80312209723155 36.0 36.0 36.0 32.0 36.0 45 33.72389593417306 36.0 36.0 36.0 32.0 36.0 46 33.745479141385005 36.0 36.0 36.0 32.0 36.0 47 33.73740380215801 36.0 36.0 36.0 32.0 36.0 48 33.679730240515646 36.0 36.0 36.0 27.0 36.0 49 33.65440241418517 36.0 36.0 36.0 27.0 36.0 50 32.92152214864929 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 4.0 21 14.0 22 55.0 23 207.0 24 497.0 25 1146.0 26 2454.0 27 4747.0 28 8365.0 29 14412.0 30 23620.0 31 38440.0 32 62222.0 33 105230.0 34 183900.0 35 208158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.191961703156615 19.206424026127067 12.314400188545841 24.28721408217048 2 17.06631040757081 21.711910653646683 36.946884033685464 24.274894905097042 3 19.3685373553676 25.09476377537045 30.19065997211795 25.346038897144002 4 13.93589003949678 17.51171819407441 38.32105785872671 30.2313339077021 5 16.341046503976457 35.424678371343184 33.335373719721304 14.898901404959059 6 32.45688401915926 37.9948582184339 16.693038701088035 12.855219061318806 7 28.553371151895035 31.826048898879982 21.588869284176347 18.03171066504864 8 26.993741105176976 33.76528379267602 19.985156166312148 19.25581893583485 9 26.75053674914419 14.580295070477497 19.071848635976192 39.59731954440212 10 14.924610273447483 27.071285489333114 32.58553172214222 25.41857251507718 11 36.47812986345224 22.148037173799604 22.705215686694586 18.668617276053567 12 23.26361843142236 24.633686881284707 29.593509122822585 22.509185564470343 13 28.656512683806934 20.40794465247884 25.796401064469578 25.139141599244645 14 22.79580884232047 20.50557714114322 25.66265373673813 31.035960279798186 15 24.591909969991015 27.60198998884419 23.112731858031957 24.69336818313284 16 25.118788745024645 27.048637200426644 24.10420661360642 23.728367440942293 17 23.3018756761968 26.699731128083727 26.064201777890677 23.934191417828792 18 24.13420029350958 25.778802731873334 26.791395486563292 23.295601488053794 19 24.44668546882723 26.939680567309033 25.902297118005237 22.7113368458585 20 24.29518677952044 25.657909838386097 25.92754689955637 24.1193564825371 21 25.465246353702 25.908724335127342 24.96729005571785 23.658739255452804 22 24.251573520477574 26.130310296860916 25.619958651569846 23.998157531091664 23 23.521931348139397 25.480396222632677 26.03206569228015 24.965606736947777 24 23.469901495246155 26.82781638358856 25.64627963597467 24.056002485190618 25 24.03488448607513 25.836188599034998 25.861591409565225 24.267335505324645 26 23.588651983026026 26.155100991474754 26.340266056183058 23.91598096931616 27 24.562834463962442 26.146684397624377 25.764111949879947 23.526369188533234 28 23.540753912568423 25.845370337780864 26.503701005859483 24.110174743791234 29 23.573043027158054 26.424125936728636 26.253957711971914 23.748873324141393 30 24.12272312007725 26.07812741498858 26.35939467857028 23.439754786363896 31 23.798760771327267 26.278748406585756 25.587057421063825 24.335433401023153 32 23.784988163208467 26.247071407912514 25.648881128619326 24.319059300259692 33 23.491937668236236 25.948358840713663 26.183411352607845 24.376292138442256 34 23.816512132902606 26.107508978975346 26.679990389780112 23.39598849834193 35 25.157045989799087 25.786454180828223 25.7399333711825 23.316566458190188 36 23.719950847091916 26.405609430257808 25.799155586093335 24.07528413655694 37 24.710966515729083 26.2069778153889 25.59440281206052 23.487652856821498 38 23.708167615701388 25.90612284248268 26.185400729336116 24.200308812479822 39 23.942454982700074 26.09098184923279 25.64337208537181 24.32319108269533 40 24.293350431771266 26.161222150638668 26.202693003974165 23.342734413615908 41 23.204090158553324 26.28793014533162 26.555883887731817 23.952095808383234 42 24.726575471597055 26.507373701357828 25.763652862942653 23.00239796410246 43 23.84665884178487 25.486823439754787 26.16917965755175 24.497338060908593 44 23.7139827169071 26.017068852328567 26.245694147100636 24.023254283663697 45 23.930059635393157 26.391377735201715 26.053336720374737 23.62522590903039 46 23.613325783892144 26.022005600869207 26.02185257165593 24.342816043582722 47 23.879866130249088 25.458053991684405 26.54670214898595 24.115377729080556 48 24.26167343309803 26.677082839177256 25.676579373836024 23.384664353888695 49 23.469901495246155 26.008040142561796 26.45044692113345 24.071611441058593 50 23.453986481419985 26.336746389663812 25.85883688794147 24.35043024097473 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 12.5 2 21.0 3 37.5 4 54.0 5 76.0 6 98.0 7 102.0 8 106.0 9 145.0 10 184.0 11 236.5 12 289.0 13 433.0 14 577.0 15 747.5 16 918.0 17 1375.0 18 1832.0 19 2208.5 20 2585.0 21 3304.0 22 4023.0 23 4663.0 24 5303.0 25 6964.5 26 8626.0 27 10376.5 28 12127.0 29 13379.5 30 14632.0 31 15073.5 32 15515.0 33 17208.0 34 18901.0 35 20759.0 36 22617.0 37 26272.0 38 29927.0 39 31827.0 40 33727.0 41 36105.0 42 38483.0 43 38489.0 44 38495.0 45 41393.0 46 44291.0 47 46441.0 48 48591.0 49 47988.0 50 47385.0 51 44193.0 52 41001.0 53 39502.5 54 38004.0 55 38022.5 56 38041.0 57 36847.5 58 35654.0 59 31836.0 60 28018.0 61 24959.5 62 21901.0 63 18997.0 64 16093.0 65 14039.5 66 11986.0 67 10869.5 68 9753.0 69 8983.0 70 8213.0 71 6486.0 72 4759.0 73 4330.5 74 3902.0 75 2983.5 76 2065.0 77 1778.0 78 1491.0 79 1345.0 80 1199.0 81 1025.0 82 851.0 83 695.0 84 539.0 85 438.5 86 338.0 87 253.5 88 169.0 89 136.5 90 104.0 91 71.5 92 39.0 93 29.0 94 19.0 95 14.0 96 9.0 97 7.0 98 5.0 99 6.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007498419975790815 2 0.0021424057073688046 3 6.12115916391087E-4 4 0.0 5 0.0 6 1.5302897909777176E-4 7 0.0 8 1.5302897909777176E-4 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.5302897909777176E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 653471.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.92682749874123 #Duplication Level Percentage of deduplicated Percentage of total 1 86.81893437949324 58.10515844840878 2 8.75058413256783 11.712976695071786 3 2.002580523452497 4.020790837363325 4 0.7743969972276857 2.0731173699600207 5 0.3843138250502967 1.2860452537261309 6 0.21186972541865404 0.8507861139179956 7 0.15570019485639364 0.7294364057871977 8 0.10937051117921512 0.5855857068112382 9 0.08369681895617315 0.5041406308025858 >10 0.557053810492107 7.516992141066181 >50 0.08778246693179234 4.1557561229621935 >100 0.061883042737529106 7.558791988438215 >500 0.0016043751820549405 0.7312287965685638 >1k 2.291964545792772E-4 0.1691934891158225 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1103 0.16879096394484225 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 862 0.13191097998227924 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 793 0.121351980424533 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 792 0.12119895144543523 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 667 0.10207032905821375 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.060579581955435E-4 13 0.0 0.0 0.0 0.0 3.060579581955435E-4 14 0.0 0.0 0.0 0.0 3.060579581955435E-4 15 0.0 0.0 0.0 0.0 3.060579581955435E-4 16 0.0 0.0 0.0 0.0 3.060579581955435E-4 17 0.0 0.0 0.0 0.0 3.060579581955435E-4 18 0.0 0.0 0.0 0.0 3.060579581955435E-4 19 0.0 0.0 0.0 0.0 3.060579581955435E-4 20 0.0 0.0 0.0 0.0 4.590869372933152E-4 21 0.0 0.0 0.0 0.0 4.590869372933152E-4 22 0.0 0.0 0.0 0.0 6.12115916391087E-4 23 0.0 0.0 0.0 0.0 6.12115916391087E-4 24 0.0 0.0 0.0 1.5302897909777176E-4 6.12115916391087E-4 25 0.0 0.0 0.0 1.5302897909777176E-4 6.12115916391087E-4 26 1.5302897909777176E-4 0.0 0.0 4.590869372933152E-4 6.12115916391087E-4 27 1.5302897909777176E-4 0.0 0.0 0.0010712028536844023 6.12115916391087E-4 28 1.5302897909777176E-4 0.0 0.0 0.0019893767282710326 6.12115916391087E-4 29 1.5302897909777176E-4 0.0 0.0 0.005049956310226467 6.12115916391087E-4 30 1.5302897909777176E-4 0.0 0.0 0.009793854662257392 6.12115916391087E-4 31 1.5302897909777176E-4 0.0 0.0 0.02096497013639473 6.12115916391087E-4 32 1.5302897909777176E-4 0.0 0.0 0.03810421579534516 6.12115916391087E-4 33 1.5302897909777176E-4 0.0 0.0 0.05692678022437109 6.12115916391087E-4 34 1.5302897909777176E-4 0.0 0.0 0.0855431993156544 7.651448954888587E-4 35 1.5302897909777176E-4 0.0 0.0 0.11660808207250208 7.651448954888587E-4 36 1.5302897909777176E-4 0.0 0.0 0.16175163090634473 7.651448954888587E-4 37 1.5302897909777176E-4 0.0 0.0 0.24270396084906598 7.651448954888587E-4 38 1.5302897909777176E-4 0.0 0.0 0.3427849131790087 7.651448954888587E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATAC 30 0.0057431078 29.333332 1 TAGTACG 45 0.0013975273 24.444445 2 GTATAGA 75 2.0618536E-6 23.466667 1 GTATTAT 85 2.3492248E-7 23.294117 1 CATCCCG 70 3.2124393E-5 22.0 15 TAATACC 55 0.0044814446 20.000002 4 TAACGGC 80 8.9805195E-5 19.250002 36 ATCCCGA 80 8.9805195E-5 19.250002 16 TTAACGG 80 8.9805195E-5 19.250002 35 GCACCGG 70 8.11787E-4 18.857143 6 GTAATAC 70 8.11787E-4 18.857143 3 TATAGGG 70 8.11787E-4 18.857143 4 GTAAACG 140 4.0708983E-9 18.857143 27 CGGTCCA 210 0.0 18.857141 10 TATAGAC 60 0.007408552 18.333332 3 CGCACTG 60 0.007408552 18.333332 5 ATACGAA 205 0.0 18.243904 40 ATTTCGG 85 1.4295593E-4 18.117645 22 TAGCGGC 220 0.0 18.000002 30 CTAGCGG 220 0.0 18.000002 29 >>END_MODULE