##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062622_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 571106 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14552990162947 32.0 32.0 32.0 32.0 32.0 2 31.372876488777916 32.0 32.0 32.0 32.0 32.0 3 31.489021302525277 32.0 32.0 32.0 32.0 32.0 4 31.601021526651795 32.0 32.0 32.0 32.0 32.0 5 31.530426925999727 32.0 32.0 32.0 32.0 32.0 6 35.1116377695209 36.0 36.0 36.0 36.0 36.0 7 35.11845786946731 36.0 36.0 36.0 36.0 36.0 8 35.07167846249207 36.0 36.0 36.0 36.0 36.0 9 35.1883153039891 36.0 36.0 36.0 36.0 36.0 10 35.08183769738017 36.0 36.0 36.0 36.0 36.0 11 35.19895781168469 36.0 36.0 36.0 36.0 36.0 12 35.11091286030965 36.0 36.0 36.0 36.0 36.0 13 35.148014554215855 36.0 36.0 36.0 36.0 36.0 14 35.10786964241314 36.0 36.0 36.0 36.0 36.0 15 35.087684247757856 36.0 36.0 36.0 36.0 36.0 16 35.08360269372061 36.0 36.0 36.0 36.0 36.0 17 35.0646272320725 36.0 36.0 36.0 36.0 36.0 18 35.06436808578442 36.0 36.0 36.0 36.0 36.0 19 35.0435750981429 36.0 36.0 36.0 36.0 36.0 20 35.016047808988176 36.0 36.0 36.0 36.0 36.0 21 34.99845037523682 36.0 36.0 36.0 36.0 36.0 22 34.98049924182201 36.0 36.0 36.0 36.0 36.0 23 34.936694764194385 36.0 36.0 36.0 32.0 36.0 24 34.92889761270237 36.0 36.0 36.0 32.0 36.0 25 34.90657075919356 36.0 36.0 36.0 32.0 36.0 26 34.83383995265327 36.0 36.0 36.0 32.0 36.0 27 34.83148137123406 36.0 36.0 36.0 32.0 36.0 28 34.78811464071468 36.0 36.0 36.0 32.0 36.0 29 34.76012859259052 36.0 36.0 36.0 32.0 36.0 30 34.73727644255182 36.0 36.0 36.0 32.0 36.0 31 34.72327203706492 36.0 36.0 36.0 32.0 36.0 32 34.66942388978578 36.0 36.0 36.0 32.0 36.0 33 34.632388733440024 36.0 36.0 36.0 32.0 36.0 34 34.58046667343716 36.0 36.0 36.0 32.0 36.0 35 34.51993500330937 36.0 36.0 36.0 32.0 36.0 36 34.486923618382576 36.0 36.0 36.0 32.0 36.0 37 34.43862260245909 36.0 36.0 36.0 32.0 36.0 38 34.38205166816668 36.0 36.0 36.0 32.0 36.0 39 34.31545807608395 36.0 36.0 36.0 32.0 36.0 40 34.272896800243736 36.0 36.0 36.0 32.0 36.0 41 34.24699092637794 36.0 36.0 36.0 32.0 36.0 42 34.15067080366867 36.0 36.0 36.0 32.0 36.0 43 34.161167979324325 36.0 36.0 36.0 32.0 36.0 44 34.12635482730001 36.0 36.0 36.0 32.0 36.0 45 34.00277356567783 36.0 36.0 36.0 32.0 36.0 46 34.024319478345525 36.0 36.0 36.0 32.0 36.0 47 33.94653531918768 36.0 36.0 36.0 32.0 36.0 48 33.887059495084976 36.0 36.0 36.0 32.0 36.0 49 33.89262063434809 36.0 36.0 36.0 32.0 36.0 50 33.33004030775373 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 11.0 21 26.0 22 65.0 23 191.0 24 487.0 25 1085.0 26 2498.0 27 4838.0 28 7724.0 29 11268.0 30 15577.0 31 21565.0 32 30948.0 33 47032.0 34 96889.0 35 330898.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.63025424945798 18.201480173866138 11.553306924173489 25.61495865250239 2 15.21014348101687 21.568905558882552 37.69747463604431 25.523476324056272 3 18.757978010894746 25.77214888434795 28.728718738016568 26.741154366740734 4 11.918865773774607 16.463580124776094 36.931691831420956 34.68586227002835 5 13.174787167355973 37.92851064425869 34.04236691612415 14.85433527226119 6 32.60048117499151 36.261648532136114 17.659542428497886 13.47832786437449 7 28.4530367392393 31.526721834475563 21.592839157704525 18.427402268580614 8 27.45252194864001 33.16652250195235 20.623491961212103 18.757463588195534 9 27.517133421816613 14.399428477375478 19.075267988779665 39.00817011202824 10 15.331129422559034 27.451296256736928 32.914905464134506 24.302668856569536 11 36.32828231536702 21.83167397996169 22.603509681215044 19.236534023456244 12 23.800485373993617 24.815183170899974 29.974120390960696 21.41021106414571 13 29.580147993542354 20.275745658424178 26.00112763655083 24.142978711482634 14 23.131957990285514 20.293430641597183 26.26640238414585 30.30820898397145 15 24.704520701936243 27.29720927463553 24.50053054949519 23.497739473933034 16 24.716777620967036 26.394574737439285 25.36674452728565 23.521903114308028 17 22.701214835774795 26.053832388383242 27.281100181052203 23.96385259478976 18 23.619082972337885 25.04666384173866 28.76331188956166 22.570941296361795 19 24.214243940704527 26.301247053961962 26.85928706754963 22.62522193778388 20 23.964202792476353 24.82884088067714 28.09548490122674 23.11147142561976 21 25.42067497102114 25.091664244466 25.582641401070905 23.905019383441953 22 23.936362076392122 25.81727385108894 26.522922189576015 23.72344188294292 23 23.136335461367942 25.317541752319183 26.76140681414659 24.78471597216629 24 23.046334655913263 26.56179413278796 26.849131334638404 23.542739876660374 25 24.155760927043314 25.294778902690567 26.63691153656239 23.912548633703725 26 22.722401795813738 25.80361614131177 27.728302626832846 23.745679436041645 27 24.04037078931057 26.212296841567063 26.859637265236223 22.887695103886145 28 23.05946706916054 25.48336035692148 27.357443276729715 24.09972929718826 29 22.907131075492117 26.046653335808063 27.61974134398868 23.42647424471114 30 23.861769969147584 25.790133530377897 27.430634593227875 22.917461907246643 31 23.064544935616155 25.836884921538207 26.8373997121375 24.261170430708134 32 22.850223951420574 26.250643488249114 27.02860764901787 23.870524911312437 33 22.896975342580888 25.65285603723302 27.342034578519574 24.10813404166652 34 22.866333045003906 26.241713447240965 28.15239202529828 22.739561482456846 35 24.334011549519705 25.978014589235627 26.913567708971716 22.77440615227296 36 23.22511057491954 26.360255364153062 26.95839301285576 23.456241048071636 37 23.962451804043383 26.27725851243027 26.70852696347088 23.05176272005547 38 23.244896744212106 26.266577482989145 26.563545121220926 23.924980651577815 39 23.14351451394312 26.11721816965677 26.773313535490782 23.965953780909324 40 24.222123388652893 26.00970747987239 26.71255423686671 23.055614894608006 41 22.803647659103564 26.058910254838857 27.60538323883833 23.532058847219258 42 24.098853802971778 26.839500898257068 26.669830119102233 22.39181517966892 43 23.196044166932232 25.768596372652365 26.741445546010723 24.29391391440468 44 22.835165450897033 26.19023438731164 27.234698987578486 23.739901174212843 45 23.184837840961222 26.328212275829703 26.952614751026953 23.534335132182115 46 23.113747710582626 25.947547390501942 26.718682696382107 24.220022202533332 47 23.449412193183054 25.683148137123407 27.316119949711613 23.55131971998193 48 23.31808806071027 27.32575038609295 25.717992806939517 23.638168746257264 49 22.449072501427057 26.450081070764448 27.320147223107444 23.780699204701055 50 22.31739817126768 27.568612481745948 25.823402310604337 24.29058703638204 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 48.5 2 59.0 3 163.5 4 268.0 5 286.5 6 305.0 7 248.5 8 192.0 9 292.0 10 392.0 11 532.5 12 673.0 13 1152.5 14 1632.0 15 2226.5 16 2821.0 17 3279.5 18 3738.0 19 3986.0 20 4234.0 21 4816.5 22 5399.0 23 5465.0 24 5531.0 25 6024.0 26 6517.0 27 8055.0 28 9593.0 29 10538.0 30 11483.0 31 12298.0 32 13113.0 33 14645.0 34 16177.0 35 18630.0 36 21083.0 37 23942.0 38 26801.0 39 27437.5 40 28074.0 41 30074.5 42 32075.0 43 32322.0 44 32569.0 45 35601.5 46 38634.0 47 41078.5 48 43523.0 49 42342.5 50 41162.0 51 38047.0 52 34932.0 53 33517.5 54 32103.0 55 31977.0 56 31851.0 57 31213.0 58 30575.0 59 27772.0 60 24969.0 61 22128.5 62 19288.0 63 16821.5 64 14355.0 65 12422.5 66 10490.0 67 9276.0 68 8062.0 69 7392.5 70 6723.0 71 5340.0 72 3957.0 73 3479.0 74 3001.0 75 2244.0 76 1487.0 77 1326.0 78 1165.0 79 1007.5 80 850.0 81 685.0 82 520.0 83 419.0 84 318.0 85 275.5 86 233.0 87 165.5 88 98.0 89 64.5 90 31.0 91 18.0 92 5.0 93 4.0 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01610909358332779 2 0.0035019768659408238 3 8.754942164852059E-4 4 5.252965298911236E-4 5 0.0 6 7.003953731881648E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 571106.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.97861644529993 #Duplication Level Percentage of deduplicated Percentage of total 1 84.23580481787783 53.892902474041534 2 10.703504298135629 13.695907922220773 3 2.39479197301641 4.596464313236997 4 0.8324603089466011 2.130386352481219 5 0.41118244216778704 1.3153441878247285 6 0.2524960099864797 0.9692607226136164 7 0.16854357196071174 0.7548229181356627 8 0.11126248883836833 0.5694736078511546 9 0.08724591331396737 0.5023685541900784 >10 0.6249691524271206 8.14748643796242 >50 0.10757889135859498 4.782893968164488 >100 0.06850930533593295 7.809541674483146 >500 0.001100551089733691 0.4043393942586759 >1k 5.502755448668455E-4 0.4288074725355396 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1241 0.2172976645316281 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1195 0.20924311773996418 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 622 0.10891148053075962 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 598 0.10470910829163062 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 1.750988432970412E-4 11 0.0 0.0 0.0 1.750988432970412E-4 1.750988432970412E-4 12 0.0 0.0 0.0 3.501976865940824E-4 3.501976865940824E-4 13 0.0 0.0 0.0 3.501976865940824E-4 3.501976865940824E-4 14 0.0 0.0 0.0 3.501976865940824E-4 3.501976865940824E-4 15 0.0 0.0 0.0 3.501976865940824E-4 3.501976865940824E-4 16 0.0 0.0 0.0 5.252965298911236E-4 5.252965298911236E-4 17 0.0 0.0 0.0 5.252965298911236E-4 5.252965298911236E-4 18 0.0 0.0 0.0 5.252965298911236E-4 5.252965298911236E-4 19 0.0 0.0 0.0 5.252965298911236E-4 5.252965298911236E-4 20 0.0 0.0 0.0 0.0010505930597822471 5.252965298911236E-4 21 0.0 0.0 0.0 0.0017509884329704119 5.252965298911236E-4 22 0.0 0.0 0.0 0.0036770757092378648 8.754942164852059E-4 23 0.0 0.0 0.0 0.006653756045287565 8.754942164852059E-4 24 0.0 0.0 0.0 0.011556523657604718 8.754942164852059E-4 25 0.0 0.0 0.0 0.015758895896733707 8.754942164852059E-4 26 0.0 0.0 0.0 0.018910675076080446 8.754942164852059E-4 27 0.0 0.0 0.0 0.025739529964665053 8.754942164852059E-4 28 0.0 0.0 0.0 0.03764625130886386 8.754942164852059E-4 29 0.0 0.0 0.0 0.059708705564291045 8.754942164852059E-4 30 0.0 0.0 0.0 0.09472847422369927 8.754942164852059E-4 31 0.0 0.0 0.0 0.16564350575900097 8.754942164852059E-4 32 0.0 0.0 0.0 0.2530178285642245 8.754942164852059E-4 33 0.0 0.0 0.0 0.32813523233865516 8.754942164852059E-4 34 0.0 0.0 0.0 0.4193617296964136 0.0010505930597822471 35 0.0 0.0 0.0 0.5177672796293508 0.0010505930597822471 36 0.0 0.0 0.0 0.6618736276628157 0.0010505930597822471 37 0.0 0.0 0.0 0.8614863090214426 0.0010505930597822471 38 0.0 0.0 0.0 1.1113523584063203 0.0010505930597822471 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAAGAC 55 1.5922045E-4 23.999952 3 GCGAGGA 160 0.0 23.374952 20 TTAGGAC 155 0.0 22.709631 3 TAAGACC 60 2.8702477E-4 21.999956 4 TATGGCG 295 0.0 20.881315 16 CGGCTAA 85 6.1042374E-6 20.705841 9 CTAAAAC 65 4.927848E-4 20.307652 3 GATAATT 55 0.004480817 19.99996 42 TTAGACT 55 0.004480817 19.99996 4 GACCTAC 55 0.004480817 19.99996 7 CTATACA 80 8.978137E-5 19.24996 4 CGTCGTA 80 8.978137E-5 19.24996 10 TAGGACG 195 0.0 19.17945 4 TCTTGCG 130 3.5774065E-8 18.615349 2 TCGCACG 95 1.594734E-5 18.526278 13 CTAAACG 95 1.594734E-5 18.526278 12 TGGCGAG 345 0.0 18.492718 18 GTTTGCC 120 3.1547825E-7 18.333296 40 TTTAGAC 60 0.007407521 18.333296 3 TTAACGG 145 6.2864274E-9 18.20686 35 >>END_MODULE