##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062619_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 26798 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.175908649899245 32.0 32.0 32.0 21.0 32.0 2 30.0970594820509 32.0 32.0 32.0 21.0 32.0 3 30.84021195611613 32.0 32.0 32.0 32.0 32.0 4 31.20658258078961 32.0 32.0 32.0 32.0 32.0 5 31.00100753787596 32.0 32.0 32.0 32.0 32.0 6 34.535151877005745 36.0 36.0 36.0 32.0 36.0 7 34.54171953130831 36.0 36.0 36.0 32.0 36.0 8 34.44219717889395 36.0 36.0 36.0 32.0 36.0 9 34.7390103739085 36.0 36.0 36.0 32.0 36.0 10 34.40592581535935 36.0 36.0 36.0 32.0 36.0 11 34.876520635868346 36.0 36.0 36.0 32.0 36.0 12 34.600194044331666 36.0 36.0 36.0 32.0 36.0 13 34.74475707142324 36.0 36.0 36.0 32.0 36.0 14 34.670945592954695 36.0 36.0 36.0 32.0 36.0 15 34.58138667064706 36.0 36.0 36.0 32.0 36.0 16 34.59485782521084 36.0 36.0 36.0 32.0 36.0 17 34.56377341592656 36.0 36.0 36.0 32.0 36.0 18 34.569221583700276 36.0 36.0 36.0 32.0 36.0 19 34.599783565937756 36.0 36.0 36.0 32.0 36.0 20 34.56851257556534 36.0 36.0 36.0 32.0 36.0 21 34.60191059034256 36.0 36.0 36.0 32.0 36.0 22 34.58672288976789 36.0 36.0 36.0 32.0 36.0 23 34.538398387939395 36.0 36.0 36.0 32.0 36.0 24 34.47421449361892 36.0 36.0 36.0 32.0 36.0 25 34.43245764609299 36.0 36.0 36.0 32.0 36.0 26 34.384170460482125 36.0 36.0 36.0 32.0 36.0 27 34.3336816180312 36.0 36.0 36.0 32.0 36.0 28 34.32480035823569 36.0 36.0 36.0 32.0 36.0 29 34.2870736622136 36.0 36.0 36.0 32.0 36.0 30 34.235092171057545 36.0 36.0 36.0 32.0 36.0 31 34.292148667811034 36.0 36.0 36.0 32.0 36.0 32 34.18381968803642 36.0 36.0 36.0 32.0 36.0 33 34.195798193895065 36.0 36.0 36.0 32.0 36.0 34 34.11896410179864 36.0 36.0 36.0 32.0 36.0 35 34.047540861258305 36.0 36.0 36.0 32.0 36.0 36 34.06418389432047 36.0 36.0 36.0 32.0 36.0 37 34.03115904171953 36.0 36.0 36.0 32.0 36.0 38 34.024889917158 36.0 36.0 36.0 32.0 36.0 39 34.00044779461154 36.0 36.0 36.0 32.0 36.0 40 33.94327934920516 36.0 36.0 36.0 32.0 36.0 41 33.88301365773565 36.0 36.0 36.0 32.0 36.0 42 33.782035972833796 36.0 36.0 36.0 32.0 36.0 43 33.9169714157773 36.0 36.0 36.0 32.0 36.0 44 33.819911933726395 36.0 36.0 36.0 32.0 36.0 45 33.794574221956864 36.0 36.0 36.0 32.0 36.0 46 33.81297111724756 36.0 36.0 36.0 32.0 36.0 47 33.711433689081275 36.0 36.0 36.0 27.0 36.0 48 33.662810657511756 36.0 36.0 36.0 27.0 36.0 49 33.641615045898945 36.0 36.0 36.0 27.0 36.0 50 32.99567131875513 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 1.0 22 8.0 23 25.0 24 35.0 25 83.0 26 170.0 27 269.0 28 448.0 29 647.0 30 960.0 31 1460.0 32 2177.0 33 3415.0 34 6094.0 35 11004.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.439170025376924 20.014181221077774 12.893715479922378 24.652933273622928 2 17.75505634748862 21.28517053511456 36.11090379879096 24.848869318605864 3 19.695499664154042 24.572729308157328 29.543249496231063 26.18852153145757 4 14.015971341144862 16.99380550787372 37.61474736920666 31.37547578177476 5 16.870661989700725 34.61079185013807 33.40920964251063 15.10933651765057 6 32.8867825957161 36.857228151354576 16.628106575117545 13.627882677811776 7 28.091648630494813 31.838196880364205 21.012762146428837 19.05739234271214 8 26.960967236360922 33.84954101052317 19.572356145981043 19.617135607134863 9 27.158743189790286 14.202552429285767 19.06112396447496 39.57758041644899 10 15.739980595566832 25.87133368161803 32.39794014478692 25.990745578028214 11 36.37958056571386 21.70684379431301 23.102470333606988 18.811105306366148 12 24.277931188894694 24.26300470184342 28.617807299052167 22.841256810209718 13 28.300619449212626 20.74781700126875 25.281737443092766 25.66982610642585 14 23.180834390626163 20.796328084185387 25.464586909470853 30.55825061571759 15 24.554071199343237 27.927457272930816 22.527800582132997 24.990670945592957 16 24.837674453317412 27.214717516232557 23.990596313157695 23.957011717292335 17 22.87484140607508 27.099037241585194 25.729532054630944 24.296589297708785 18 23.82267333383088 26.005672065079484 26.893798044630195 23.277856556459437 19 24.550339577580417 26.63258452123293 25.662362862900217 23.154713038286438 20 24.919770132099412 26.184789909694757 25.25561609075304 23.639823867452794 21 25.807896111650123 25.319053660720947 24.792894992163596 24.080155235465334 22 24.632435256362413 25.860138816329574 25.13993581610568 24.36749011120233 23 23.882379282035973 26.13627882677812 25.949697738637212 24.031644152548697 24 23.755504142100158 26.45346667661766 25.4944398835734 24.296589297708785 25 24.098813344279424 25.546682588252857 25.639973132323306 24.714530935144413 26 23.55026494514516 26.378834241361293 25.975819090976938 24.095081722516607 27 24.669751473990598 26.39002910664975 25.00186581088141 23.938353608478245 28 23.33009926113889 26.315396671393387 26.091499365624298 24.26300470184342 29 23.98313306963206 26.419882080752295 25.222031494887677 24.374953354727964 30 23.76669900738861 26.86394507052765 25.710873945816854 23.658481976266884 31 24.292857675945967 26.199716396746027 24.882453914471228 24.62497201283678 32 23.51294872751698 27.158743189790286 25.333980147772223 23.994327934920516 33 24.080155235465334 26.259422344951115 25.55041421001567 24.11000820956788 34 24.04657063959997 25.931039629823122 25.99820882155385 24.02418090902306 35 24.70706769161878 26.1735950444063 25.32651690424659 23.792820359728335 36 23.9495484737667 26.386297484886935 25.210836629599225 24.453317411747143 37 24.938428240913503 26.069109635047393 25.19964176431077 23.792820359728335 38 23.740577655048885 25.87506530338085 25.972087469214124 24.412269572356145 39 24.16971415777297 26.442271811329203 24.792894992163596 24.595119038734232 40 24.826479588028956 26.274348832002385 25.62131502350922 23.277856556459437 41 23.774162250914248 26.054183147996117 25.983282334502572 24.18837226658706 42 24.356295245913877 26.5654153295022 25.800432868124485 23.277856556459437 43 23.42712142697216 26.01686693036794 26.62885289947011 23.927158743189793 44 23.591312784536157 25.804164489887306 26.27061721023957 24.333905515336966 45 23.647287110978432 26.199716396746027 25.766848272259125 24.38614822001642 46 23.662213598029705 25.333980147772223 25.972087469214124 25.03171878498395 47 23.673408463318157 25.710873945816854 26.229569370848573 24.38614822001642 48 24.26300470184342 26.296738562579296 25.427270691842672 24.012986043734607 49 23.039032763639078 26.09523098738712 26.434808567803568 24.430927681170235 50 23.11366519889544 26.755728039405923 25.725800432868123 24.40480632883051 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 4.0 2 4.0 3 6.5 4 9.0 5 12.0 6 15.0 7 19.5 8 24.0 9 23.0 10 22.0 11 23.5 12 25.0 13 33.0 14 41.0 15 53.5 16 66.0 17 78.0 18 90.0 19 100.5 20 111.0 21 144.0 22 177.0 23 223.5 24 270.0 25 306.0 26 342.0 27 397.0 28 452.0 29 508.0 30 564.0 31 615.5 32 667.0 33 725.0 34 783.0 35 925.0 36 1067.0 37 1141.0 38 1215.0 39 1264.0 40 1313.0 41 1416.0 42 1519.0 43 1456.0 44 1393.0 45 1509.5 46 1626.0 47 1741.0 48 1856.0 49 1805.0 50 1754.0 51 1684.0 52 1614.0 53 1581.5 54 1549.0 55 1569.5 56 1590.0 57 1528.5 58 1467.0 59 1345.0 60 1223.0 61 1095.5 62 968.0 63 856.5 64 745.0 65 649.5 66 554.0 67 477.5 68 401.0 69 392.5 70 384.0 71 289.5 72 195.0 73 192.5 74 190.0 75 146.0 76 102.0 77 108.0 78 114.0 79 103.0 80 92.0 81 75.0 82 58.0 83 45.5 84 33.0 85 32.0 86 31.0 87 22.5 88 14.0 89 9.0 90 4.0 91 6.0 92 8.0 93 4.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 25.5 100 50.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007463243525636242 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 26798.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.49511157549071 #Duplication Level Percentage of deduplicated Percentage of total 1 93.2341120876209 78.77826703485334 2 3.599346376363556 6.082543473393537 3 1.165923243386477 2.9554444361519514 4 0.5741288698494016 1.9404433166654227 5 0.3709755774411518 1.5672811403836109 6 0.27381530715894536 1.388163295768341 7 0.17223866095482046 1.018732741249347 8 0.14574040542330963 0.985148145383984 9 0.08832751843836947 0.6716919173072617 >10 0.37539195336307024 4.612284498843197 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 47 0.17538622285245167 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 36 0.13433838346145233 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 28 0.10448540935890738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.003731621762818121 2 0.0 0.0 0.0 0.0 0.003731621762818121 3 0.0 0.0 0.0 0.0 0.003731621762818121 4 0.0 0.0 0.0 0.0 0.003731621762818121 5 0.0 0.0 0.0 0.0 0.003731621762818121 6 0.0 0.0 0.0 0.0 0.003731621762818121 7 0.0 0.0 0.0 0.0 0.003731621762818121 8 0.0 0.0 0.0 0.0 0.003731621762818121 9 0.0 0.0 0.0 0.0 0.003731621762818121 10 0.0 0.0 0.0 0.0 0.003731621762818121 11 0.0 0.0 0.0 0.0 0.003731621762818121 12 0.0 0.0 0.0 0.0 0.003731621762818121 13 0.0 0.0 0.0 0.0 0.003731621762818121 14 0.0 0.0 0.0 0.0 0.003731621762818121 15 0.0 0.0 0.0 0.0 0.003731621762818121 16 0.0 0.0 0.0 0.0 0.003731621762818121 17 0.0 0.0 0.0 0.0 0.003731621762818121 18 0.0 0.0 0.0 0.0 0.003731621762818121 19 0.0 0.0 0.0 0.0 0.003731621762818121 20 0.0 0.0 0.0 0.0 0.003731621762818121 21 0.0 0.0 0.0 0.0 0.003731621762818121 22 0.0 0.0 0.0 0.0 0.003731621762818121 23 0.0 0.0 0.0 0.0 0.003731621762818121 24 0.0 0.0 0.0 0.0 0.003731621762818121 25 0.0 0.0 0.0 0.007463243525636242 0.003731621762818121 26 0.0 0.0 0.0 0.011194865288454363 0.003731621762818121 27 0.0 0.0 0.0 0.011194865288454363 0.003731621762818121 28 0.0 0.0 0.0 0.014926487051272483 0.003731621762818121 29 0.0 0.0 0.0 0.022389730576908726 0.003731621762818121 30 0.0 0.0 0.0 0.055974326442271814 0.003731621762818121 31 0.0 0.0 0.0 0.11941189641017987 0.003731621762818121 32 0.0 0.0 0.0 0.19404433166654228 0.003731621762818121 33 0.0 0.0 0.0 0.26121352339726844 0.003731621762818121 34 0.0 0.0 0.0 0.34330920217926714 0.003731621762818121 35 0.0 0.0 0.0 0.43659974624972014 0.003731621762818121 36 0.0 0.0 0.0 0.5709381297111725 0.003731621762818121 37 0.0 0.0 0.0 0.742592730800806 0.003731621762818121 38 0.0 0.0 0.0 0.9664900365698933 0.003731621762818121 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAAGAGA 25 0.0023120327 35.2 6 >>END_MODULE